| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is sseA [H]
Identifier: 120610690
GI number: 120610690
Start: 2185651
End: 2186550
Strand: Reverse
Name: sseA [H]
Synonym: Aave_2010
Alternate gene names: 120610690
Gene position: 2186550-2185651 (Counterclockwise)
Preceding gene: 120610691
Following gene: 120610689
Centisome position: 40.85
GC content: 73.0
Gene sequence:
>900_bases ATGGCCTACACCACCCTCATTTCCGCCGACGAACTCAAGGCGCTGCGCGCGAGCGGCACCCCCCTGATGGTCTTCGACTG CAGCTTCGATCTGGCGCATCCTTCGCGCGGGCACCAGCAGTACCTCGAATCGCACATCCCCGGAGCGGTGTACGCGCACC TCGACGAATCGCTCAGCGCCCGGCACGGTGCGCCCGGCGCGGGCGGCACGATCGTGGCGACGGAAGGCGACATGCCGGTA TCCGGCGGCCGCCATCCATTGCCCCACCCCGAGCGCTTCGCGGCCTGGCTCTCCTCGGTGGGCTTTTCCAACGCGATGCA GGCGGTGGTGTACGACCGCAACGGCGCCAACTTCTGCGGGCGCCTCTGGTGGATGCTGCAGTGGGTGGGCCACGAGGCCG TGGCGGTGCTCGACGGCGGGCTGCAGGCCTGGGAACAGGCCGGCGGCGAACTCGCGCACGGCGAGGAGCCCGCGCACTTC CAGGCGAACTTCGCCCTGGGCGAGCCCCTGCAGCGGCTGGCCACGGCCGCCGAGGTCCAGGCCGCCCTGGGCCAGCCGGG CCAGACGGTGGTGGATGCGCGCGCGCCCGCGCGCTACCGCGGCGAGGTGGAGCCGCTCGATCCGGTCGCCGGCCACATTC CCGGCGCGCTGAACCGCCCGTTCTCCGACAACCTCGGGCCCGACGGCCGCTTCAAGCCGGCCGCGCAACTGCGGGCCGAG TTCGAATCGCTGCTGGCGGGCCGCGATCCTTCCACCGTGGTGCACCAGTGCGGCAGCGGCGTGAGCGCCACGCCCAACGT GCTGGCCATGCAGGTCGCCGGGCTGGGCCGGACCGCGCTGTTCGCGGGCAGCTGGAGCGAGTGGTGCGGCGATCCGTCCC GCCCCGTCGAGCGCGGCTGA
Upstream 100 bases:
>100_bases CCCCGCACGCCGCACAATCCGCACCATGGGAGCCTGCCCGGCCGTACTTTCCGGGAACGCCGGTTTCCCATTCCCTCACG CTCCATCGACTGAACACGCC
Downstream 100 bases:
>100_bases AACGCATAAGCTAGTCTGGAAATCTTCGTTCCCTTGCGGCGGGGACCGTCATGAGAATGGCCCATGACCGCCCCAGGGCC GAAGATGACCGCACCGACTC
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MAYTTLISADELKALRASGTPLMVFDCSFDLAHPSRGHQQYLESHIPGAVYAHLDESLSARHGAPGAGGTIVATEGDMPV SGGRHPLPHPERFAAWLSSVGFSNAMQAVVYDRNGANFCGRLWWMLQWVGHEAVAVLDGGLQAWEQAGGELAHGEEPAHF QANFALGEPLQRLATAAEVQAALGQPGQTVVDARAPARYRGEVEPLDPVAGHIPGALNRPFSDNLGPDGRFKPAAQLRAE FESLLAGRDPSTVVHQCGSGVSATPNVLAMQVAGLGRTALFAGSWSEWCGDPSRPVERG
Sequences:
>Translated_299_residues MAYTTLISADELKALRASGTPLMVFDCSFDLAHPSRGHQQYLESHIPGAVYAHLDESLSARHGAPGAGGTIVATEGDMPV SGGRHPLPHPERFAAWLSSVGFSNAMQAVVYDRNGANFCGRLWWMLQWVGHEAVAVLDGGLQAWEQAGGELAHGEEPAHF QANFALGEPLQRLATAAEVQAALGQPGQTVVDARAPARYRGEVEPLDPVAGHIPGALNRPFSDNLGPDGRFKPAAQLRAE FESLLAGRDPSTVVHQCGSGVSATPNVLAMQVAGLGRTALFAGSWSEWCGDPSRPVERG >Mature_298_residues AYTTLISADELKALRASGTPLMVFDCSFDLAHPSRGHQQYLESHIPGAVYAHLDESLSARHGAPGAGGTIVATEGDMPVS GGRHPLPHPERFAAWLSSVGFSNAMQAVVYDRNGANFCGRLWWMLQWVGHEAVAVLDGGLQAWEQAGGELAHGEEPAHFQ ANFALGEPLQRLATAAEVQAALGQPGQTVVDARAPARYRGEVEPLDPVAGHIPGALNRPFSDNLGPDGRFKPAAQLRAEF ESLLAGRDPSTVVHQCGSGVSATPNVLAMQVAGLGRTALFAGSWSEWCGDPSRPVERG
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI61835204, Length=288, Percent_Identity=33.6805555555556, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI194473681, Length=288, Percent_Identity=33.6805555555556, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI194473668, Length=288, Percent_Identity=32.9861111111111, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI17402865, Length=299, Percent_Identity=31.438127090301, Blast_Score=112, Evalue=4e-25, Organism=Escherichia coli, GI87082121, Length=268, Percent_Identity=33.5820895522388, Blast_Score=117, Evalue=1e-27, Organism=Caenorhabditis elegans, GI71997283, Length=273, Percent_Identity=26.7399267399267, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324825, Length=236, Percent_Identity=27.9661016949153, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 31641; Mature: 31509
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTTLISADELKALRASGTPLMVFDCSFDLAHPSRGHQQYLESHIPGAVYAHLDESLSA CCCEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHH RHGAPGAGGTIVATEGDMPVSGGRHPLPHPERFAAWLSSVGFSNAMQAVVYDRNGANFCG HCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHEEEEEEECCCCHHHH RLWWMLQWVGHEAVAVLDGGLQAWEQAGGELAHGEEPAHFQANFALGEPLQRLATAAEVQ HHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH AALGQPGQTVVDARAPARYRGEVEPLDPVAGHIPGALNRPFSDNLGPDGRFKPAAQLRAE HHHCCCCCEEEECCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH FESLLAGRDPSTVVHQCGSGVSATPNVLAMQVAGLGRTALFAGSWSEWCGDPSRPVERG HHHHHCCCCCHHHHHHCCCCCCCCCCCEEEHHHCCCCCEEECCCCHHHCCCCCCCCCCC >Mature Secondary Structure AYTTLISADELKALRASGTPLMVFDCSFDLAHPSRGHQQYLESHIPGAVYAHLDESLSA CCEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHH RHGAPGAGGTIVATEGDMPVSGGRHPLPHPERFAAWLSSVGFSNAMQAVVYDRNGANFCG HCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHEEEEEEECCCCHHHH RLWWMLQWVGHEAVAVLDGGLQAWEQAGGELAHGEEPAHFQANFALGEPLQRLATAAEVQ HHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH AALGQPGQTVVDARAPARYRGEVEPLDPVAGHIPGALNRPFSDNLGPDGRFKPAAQLRAE HHHCCCCCEEEECCCCHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH FESLLAGRDPSTVVHQCGSGVSATPNVLAMQVAGLGRTALFAGSWSEWCGDPSRPVERG HHHHHCCCCCHHHHHHCCCCCCCCCCCEEEHHHCCCCCEEECCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]