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The map label for this gene is nudC [H]

Identifier: 120610668

GI number: 120610668

Start: 2157369

End: 2157983

Strand: Direct

Name: nudC [H]

Synonym: Aave_1988

Alternate gene names: 120610668

Gene position: 2157369-2157983 (Clockwise)

Preceding gene: 120610667

Following gene: 120610669

Centisome position: 40.3

GC content: 73.01

Gene sequence:

>615_bases
ATGAACGCCGAGCCCCGCTTCTGCACCCAGTGCGCCACGCCGCTGGCCTGGGTGACGGCGCTGGAGGACGGCGGGGAGCG
GCAGCGCCTGCGCTGCCCGGCCTGCGGCTGGACGCACTGGAACAATCCCACGCCCGTGCTGGCCGCGGTCGTCGAGCTGG
ACGGGCGCGTGCTGCTGGCGCGCAATGCCGCGTGGGAGCACAAGGCCTTCGCGCTCATCACCGGCTTCATGGAGGCCGGC
GAGACGCCGCAGGAAGGCATCGTGCGCGAGGTGAAGGAAGAGACGAACCTCGACGTGAGCGCGCTGTCGCTCATCGGGGT
GTACGACTTCCAGCGCATGAACCAGGTCATCGTGGCCTACCATGCGGTGGCGCACGGCACGGTGCGGCTGTCGCCCGAGC
TGGTGGACTACCGGCTGATCGCTCCGGAGCACCTGCGGTGCTGGCCCGCCGGCACGGGCCAGGCGCTGGCCGACTGGCTG
CGCGGTCGCGGCATCGAGCCCGCGTTCATGGAATGGCCGGGCCAGCGCAGCGAGGTGTCCGCGCCCGCGGCCCCGGTGGA
AGCGGGCGCCGCTGCAGACCCGGCAGCAGGGCTGGCGCAGCCCGGGCCGCTCTAG

Upstream 100 bases:

>100_bases
CTCGTCTTCGTGGTGTGCGACCGGGGGGATCGTTACCTCTCCACGGGCGTGTTCCCCGCCTGACGCGGACTGACGTCTCT
ACACGCCTGGGTCCCGCTCC

Downstream 100 bases:

>100_bases
AATTCTTTCTCTCTTCGCCAGGAAGCCGACGACGATGCACATCCACAAGGAAATAGACACCCGCGGGCTCAACTGCCCGC
TGCCCATTCTGAAGGCCAAG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNAEPRFCTQCATPLAWVTALEDGGERQRLRCPACGWTHWNNPTPVLAAVVELDGRVLLARNAAWEHKAFALITGFMEAG
ETPQEGIVREVKEETNLDVSALSLIGVYDFQRMNQVIVAYHAVAHGTVRLSPELVDYRLIAPEHLRCWPAGTGQALADWL
RGRGIEPAFMEWPGQRSEVSAPAAPVEAGAAADPAAGLAQPGPL

Sequences:

>Translated_204_residues
MNAEPRFCTQCATPLAWVTALEDGGERQRLRCPACGWTHWNNPTPVLAAVVELDGRVLLARNAAWEHKAFALITGFMEAG
ETPQEGIVREVKEETNLDVSALSLIGVYDFQRMNQVIVAYHAVAHGTVRLSPELVDYRLIAPEHLRCWPAGTGQALADWL
RGRGIEPAFMEWPGQRSEVSAPAAPVEAGAAADPAAGLAQPGPL
>Mature_204_residues
MNAEPRFCTQCATPLAWVTALEDGGERQRLRCPACGWTHWNNPTPVLAAVVELDGRVLLARNAAWEHKAFALITGFMEAG
ETPQEGIVREVKEETNLDVSALSLIGVYDFQRMNQVIVAYHAVAHGTVRLSPELVDYRLIAPEHLRCWPAGTGQALADWL
RGRGIEPAFMEWPGQRSEVSAPAAPVEAGAAADPAAGLAQPGPL

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 22086; Mature: 22086

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAEPRFCTQCATPLAWVTALEDGGERQRLRCPACGWTHWNNPTPVLAAVVELDGRVLLA
CCCCCCHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHEECCCCEEEEE
RNAAWEHKAFALITGFMEAGETPQEGIVREVKEETNLDVSALSLIGVYDFQRMNQVIVAY
ECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
HAVAHGTVRLSPELVDYRLIAPEHLRCWPAGTGQALADWLRGRGIEPAFMEWPGQRSEVS
HHHHCCEEEECHHHEEEEEECCCCEEECCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCC
APAAPVEAGAAADPAAGLAQPGPL
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAEPRFCTQCATPLAWVTALEDGGERQRLRCPACGWTHWNNPTPVLAAVVELDGRVLLA
CCCCCCHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHEECCCCEEEEE
RNAAWEHKAFALITGFMEAGETPQEGIVREVKEETNLDVSALSLIGVYDFQRMNQVIVAY
ECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
HAVAHGTVRLSPELVDYRLIAPEHLRCWPAGTGQALADWLRGRGIEPAFMEWPGQRSEVS
HHHHCCEEEECHHHEEEEEECCCCEEECCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCC
APAAPVEAGAAADPAAGLAQPGPL
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA