| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610649
Identifier: 120610649
GI number: 120610649
Start: 2138468
End: 2139526
Strand: Reverse
Name: 120610649
Synonym: Aave_1969
Alternate gene names: NA
Gene position: 2139526-2138468 (Counterclockwise)
Preceding gene: 120610650
Following gene: 120610648
Centisome position: 39.97
GC content: 71.39
Gene sequence:
>1059_bases ATGGAGCCGCTTCCGACGGCCGACCCGGCCCCCGCCGCGCCGACGCGCGGCGTGCGTACCGCCAGCTACCTGCTGATGGG TGGCGCCCTGCTGCTCGTGATGTGGCAGGGCCTGCTGCCCGGCCTGATCTGCGCCTGCCTGGGCTTCCTGCTCACCCGCT GGCTCGCGCCACGGCTGGCCGGCGCCCTGCCCCGCGGCTGGCAGGCAGGCGGCCGCGCCTTTCGCTCGGGCCAGGTCGCG GCCGCCACGCTGGTGGGCATTGCGCCGCTGGTGCTGGTGGCGCTCGCAGCCACGCATTCGCGCACCTACATCGTGGAGGC GCCGCAGCAATACCGTGAGCTGCTCGACTTCCTCGCGCGCACCGTGCTGGAACTGCGGCAGAAGCTGCCGGCCGACATTG GCGCGCACCTGCCCGAGGGCGCCGCGGAAATCCAGCGCACCATCGCCGGCTACCTGGGCGCCAAGGCCGGCGCGCTGGCC CTGGCCGGGCGTGTCTGGCTGGCGGGCCTGCTGCATGCCTACGTGGGCCTGCTCATCGGCGCACTGGCCGCCGTTCGGCC GCTGGACGGTACACGCGGGCCGATCGCGGTGGCGCTGGGCGAGCGCATCACCTACCTGGGCGACGCCTTCCGGCAGATCG TGGCGGCGCAGTTCTGGATCGCCACGTTCAACACCCTGCTCACCGCGCTGTTCCTGCTGGCCATCCTGCCGCTGTGGGAC CTGCGCCTGCCCTACACCCCCGCCCTCATCACGCTGACCTTCCTGGCGGGCCTGGTGCCGATCGTGGGCAACCTGCTGTG CAACGCGGTCATCACCATCGTGGGCCTGTCGGTTTCGCCGACCGCGGCCATCGCCTGCCTGGCCTTCCTGGTGCTGATCC ACAAGGCCGAATACGTCATCAACGCGAAGGTGGTGGGCCAGCGCACGCACATGGGCGTGTGGGAGCTGCTGTCGGTGATG TTCGTGGCCGAGGCGGTATTCGGCCCTGCGGGGCTGGTGGCGGCGCCGCTCTTCTACGCCTACCTGAAGAAAGAGCTGGA AGCCGTGCGGCTGGTGTGA
Upstream 100 bases:
>100_bases CCGTGCACGCCATCGGCGTGATCGCCGAGCGCGGTACGGGCGCCCCGGTCGTGGTCGCCTGATCCGCCAGCACATCCCAC ATCCCTTTTCGCGCCATCCC
Downstream 100 bases:
>100_bases CGGCCACCACGCGCCGAAGCTTGTCCGGAATTGATCGGTACAGGTCCGCGCACGGCCGGACTTCCGGGCGGCCTGGCGGC ACCATCAAGGCAATCGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MEPLPTADPAPAAPTRGVRTASYLLMGGALLLVMWQGLLPGLICACLGFLLTRWLAPRLAGALPRGWQAGGRAFRSGQVA AATLVGIAPLVLVALAATHSRTYIVEAPQQYRELLDFLARTVLELRQKLPADIGAHLPEGAAEIQRTIAGYLGAKAGALA LAGRVWLAGLLHAYVGLLIGALAAVRPLDGTRGPIAVALGERITYLGDAFRQIVAAQFWIATFNTLLTALFLLAILPLWD LRLPYTPALITLTFLAGLVPIVGNLLCNAVITIVGLSVSPTAAIACLAFLVLIHKAEYVINAKVVGQRTHMGVWELLSVM FVAEAVFGPAGLVAAPLFYAYLKKELEAVRLV
Sequences:
>Translated_352_residues MEPLPTADPAPAAPTRGVRTASYLLMGGALLLVMWQGLLPGLICACLGFLLTRWLAPRLAGALPRGWQAGGRAFRSGQVA AATLVGIAPLVLVALAATHSRTYIVEAPQQYRELLDFLARTVLELRQKLPADIGAHLPEGAAEIQRTIAGYLGAKAGALA LAGRVWLAGLLHAYVGLLIGALAAVRPLDGTRGPIAVALGERITYLGDAFRQIVAAQFWIATFNTLLTALFLLAILPLWD LRLPYTPALITLTFLAGLVPIVGNLLCNAVITIVGLSVSPTAAIACLAFLVLIHKAEYVINAKVVGQRTHMGVWELLSVM FVAEAVFGPAGLVAAPLFYAYLKKELEAVRLV >Mature_352_residues MEPLPTADPAPAAPTRGVRTASYLLMGGALLLVMWQGLLPGLICACLGFLLTRWLAPRLAGALPRGWQAGGRAFRSGQVA AATLVGIAPLVLVALAATHSRTYIVEAPQQYRELLDFLARTVLELRQKLPADIGAHLPEGAAEIQRTIAGYLGAKAGALA LAGRVWLAGLLHAYVGLLIGALAAVRPLDGTRGPIAVALGERITYLGDAFRQIVAAQFWIATFNTLLTALFLLAILPLWD LRLPYTPALITLTFLAGLVPIVGNLLCNAVITIVGLSVSPTAAIACLAFLVLIHKAEYVINAKVVGQRTHMGVWELLSVM FVAEAVFGPAGLVAAPLFYAYLKKELEAVRLV
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37286; Mature: 37286
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPLPTADPAPAAPTRGVRTASYLLMGGALLLVMWQGLLPGLICACLGFLLTRWLAPRLA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALPRGWQAGGRAFRSGQVAAATLVGIAPLVLVALAATHSRTYIVEAPQQYRELLDFLAR HCCCCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHH TVLELRQKLPADIGAHLPEGAAEIQRTIAGYLGAKAGALALAGRVWLAGLLHAYVGLLIG HHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALAAVRPLDGTRGPIAVALGERITYLGDAFRQIVAAQFWIATFNTLLTALFLLAILPLWD HHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLPYTPALITLTFLAGLVPIVGNLLCNAVITIVGLSVSPTAAIACLAFLVLIHKAEYVI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH NAKVVGQRTHMGVWELLSVMFVAEAVFGPAGLVAAPLFYAYLKKELEAVRLV HHHHHCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEPLPTADPAPAAPTRGVRTASYLLMGGALLLVMWQGLLPGLICACLGFLLTRWLAPRLA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALPRGWQAGGRAFRSGQVAAATLVGIAPLVLVALAATHSRTYIVEAPQQYRELLDFLAR HCCCCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHH TVLELRQKLPADIGAHLPEGAAEIQRTIAGYLGAKAGALALAGRVWLAGLLHAYVGLLIG HHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALAAVRPLDGTRGPIAVALGERITYLGDAFRQIVAAQFWIATFNTLLTALFLLAILPLWD HHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLPYTPALITLTFLAGLVPIVGNLLCNAVITIVGLSVSPTAAIACLAFLVLIHKAEYVI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH NAKVVGQRTHMGVWELLSVMFVAEAVFGPAGLVAAPLFYAYLKKELEAVRLV HHHHHCCHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA