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The map label for this gene is 120610648

Identifier: 120610648

GI number: 120610648

Start: 2137749

End: 2138342

Strand: Reverse

Name: 120610648

Synonym: Aave_1968

Alternate gene names: NA

Gene position: 2138342-2137749 (Counterclockwise)

Preceding gene: 120610649

Following gene: 120610647

Centisome position: 39.95

GC content: 70.37

Gene sequence:

>594_bases
ATGAAAGCCTGTCTGTTAGTGATCGACGTGCAGGAGTCGTTCCGCCACCGCCCCTTTTTCTCGGAAGACGGCCTGCCCGC
CTACCTCGCGGCGCAGAACGCGCTCATCGAGGGCTGCGAGGCGCGCGGCATTCCGGTCGTGCGGATACTGCACAGCGATG
GTCCCGAAGAGGCATCGAACCCCTTCGCGCCTGCATCCGGGCATGTACGCCCCCTGGCCGGGCTGGCCGGGTCCGCGCCC
GCGGCGGAATTCACCAAGCACCGCCACAGCGCGCTGGTGGGCACCGGCCTGGACGTCTGGCTCACGCGCCAGGGTATCGG
CCGGCTGATCGTGAGCGGCATCCGCACCGAACAGTGCTGCGAGACCACCACGCGCCACGCCAGCGACCTGGGCTGGGAAG
TGGACTATGTGGGCGAGGCCACGCTGACCTGGGACATGCGCCAGCCCGACGGCCGGGTGCTGACGGCGGCGGACATCCTG
GCCCGTACGGAGACCGTGCTCGCAGGCCGCTTCGCCACCCTGTGCACGGTGGCCCAGGCGCTGTCCCGCGCGGGGGCAGG
CACTGAAGCGGCCCTTGCCGGAGAGGCGGCATGA

Upstream 100 bases:

>100_bases
CGGAATTGATCGGTACAGGTCCGCGCACGGCCGGACTTCCGGGCGGCCTGGCGGCACCATCAAGGCAATCGAAACACCCA
ACCGCCTACGGGAGATTGCC

Downstream 100 bases:

>100_bases
GCGCCGTGGAGGCGATGGACGGGCAACCCCCGCCTGCCTCCATCCGGGTGGCGCTCCTGGCGTTCGACGACGTGGAGGCG
CTGGACCTGGCGGGCCCCTA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKACLLVIDVQESFRHRPFFSEDGLPAYLAAQNALIEGCEARGIPVVRILHSDGPEEASNPFAPASGHVRPLAGLAGSAP
AAEFTKHRHSALVGTGLDVWLTRQGIGRLIVSGIRTEQCCETTTRHASDLGWEVDYVGEATLTWDMRQPDGRVLTAADIL
ARTETVLAGRFATLCTVAQALSRAGAGTEAALAGEAA

Sequences:

>Translated_197_residues
MKACLLVIDVQESFRHRPFFSEDGLPAYLAAQNALIEGCEARGIPVVRILHSDGPEEASNPFAPASGHVRPLAGLAGSAP
AAEFTKHRHSALVGTGLDVWLTRQGIGRLIVSGIRTEQCCETTTRHASDLGWEVDYVGEATLTWDMRQPDGRVLTAADIL
ARTETVLAGRFATLCTVAQALSRAGAGTEAALAGEAA
>Mature_197_residues
MKACLLVIDVQESFRHRPFFSEDGLPAYLAAQNALIEGCEARGIPVVRILHSDGPEEASNPFAPASGHVRPLAGLAGSAP
AAEFTKHRHSALVGTGLDVWLTRQGIGRLIVSGIRTEQCCETTTRHASDLGWEVDYVGEATLTWDMRQPDGRVLTAADIL
ARTETVLAGRFATLCTVAQALSRAGAGTEAALAGEAA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20833; Mature: 20833

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKACLLVIDVQESFRHRPFFSEDGLPAYLAAQNALIEGCEARGIPVVRILHSDGPEEASN
CCEEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
PFAPASGHVRPLAGLAGSAPAAEFTKHRHSALVGTGLDVWLTRQGIGRLIVSGIRTEQCC
CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCHHHHH
ETTTRHASDLGWEVDYVGEATLTWDMRQPDGRVLTAADILARTETVLAGRFATLCTVAQA
HHHHHHHHHCCCEEEECCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRAGAGTEAALAGEAA
HHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKACLLVIDVQESFRHRPFFSEDGLPAYLAAQNALIEGCEARGIPVVRILHSDGPEEASN
CCEEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
PFAPASGHVRPLAGLAGSAPAAEFTKHRHSALVGTGLDVWLTRQGIGRLIVSGIRTEQCC
CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCHHHHH
ETTTRHASDLGWEVDYVGEATLTWDMRQPDGRVLTAADILARTETVLAGRFATLCTVAQA
HHHHHHHHHCCCEEEECCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRAGAGTEAALAGEAA
HHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA