| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610642
Identifier: 120610642
GI number: 120610642
Start: 2132832
End: 2133788
Strand: Direct
Name: 120610642
Synonym: Aave_1962
Alternate gene names: NA
Gene position: 2132832-2133788 (Clockwise)
Preceding gene: 120610640
Following gene: 120610643
Centisome position: 39.85
GC content: 71.26
Gene sequence:
>957_bases ATGAGGTTTCGTCGCAGGCTCGCGATGCGGGCATTCCGCGCGCCCGTGCTGGCCATGCTCGGCATGGCGCTGTCCGCCCC CGGCGGGGCGGAAACAGGCAAGCTGCCGCTCACCGGCGGCGTGAGTTCCATCTCCGGTGCCGCGGGCGGGGGCCTCACGC CCTGGGCCGTGATCGGCACCAACGCGACGGAGGGCGAGATCGGCGTGAGCGCCTTCGCCACGCGGCTGCGCACGCGGGAC TACGGCCTGACCAGCTCGGGCCTCGCGCTCGGCCTGTACGACCGGGTGGAGCTGTCCGTGGCGCGCCAGGATTTCGGCGC GGCGCCCGCATCCGCGCTCAATGCCGTGGCACCGTTCGGCGTGGAGCCCGATTTGCACCTCAAGATGGACATCGTCGGCG CCAAGGTGCGGCTGGTTGGCGACGCCATCCTCGACACCGATTCGCCCATGCCGCAGATTTCGGTGGGGATGGAGCACAAG CGGCTGCACCCGGCATCGGCCGGCAGCGTGATCCAGTTCCTCGGCGCGGACACCGAGGGCACGGATGTCTATGTGAGCGC CACCAAGCTGCTGCTCGACCGCAATCTGCTGGTGCACGCCACGCTGCGCTCCACCAACGCCAACCAGAACGGCCTGCTGG GCTTCGGTGGCCGCGGACCGGCCAGGTCGGGGCGCTCGCTGCAGCCGGAGTTCTCCGTGGCGTATCTGCTGCGCCGCGAC CTGGCGGTGGGCGCGGAATGGCGCTTCAAGCCCGACAACCTGCGGGCGCTGGGCCGCGCCGCGGGGCTCGGTGATGCGCT GCGCGAGGACGACTGGCGCGACATCTTCGTGGTCTGGGCGCCCAGCAAGCACCTTTCCATCACGCTGGCCTACGTCGATC TGGGCCGCGTCGTGCCCGGCGTGACCGCCTACCGGCGCCAGCGCGGCGCCTACCTGTCGCTGCAGGCGGCCTACTGA
Upstream 100 bases:
>100_bases GATTCCCTGCTTCGGGATTCCCCGTAGTGATGGGGCGGGGTGGTCCGGGGTACCGCGCCAGCGGGGGCGCTGGCATACTG CGCTCCAGGAGGTGGGTCCC
Downstream 100 bases:
>100_bases CATGCGCGGCAGGAACCACTCCATGATCTTCCTCCGTTACGCCGTGGCCGCGGGCGCGGCCTTTCTCGCCTGCGGCGGCC TGCCGGGCGCCATCGTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRFRRRLAMRAFRAPVLAMLGMALSAPGGAETGKLPLTGGVSSISGAAGGGLTPWAVIGTNATEGEIGVSAFATRLRTRD YGLTSSGLALGLYDRVELSVARQDFGAAPASALNAVAPFGVEPDLHLKMDIVGAKVRLVGDAILDTDSPMPQISVGMEHK RLHPASAGSVIQFLGADTEGTDVYVSATKLLLDRNLLVHATLRSTNANQNGLLGFGGRGPARSGRSLQPEFSVAYLLRRD LAVGAEWRFKPDNLRALGRAAGLGDALREDDWRDIFVVWAPSKHLSITLAYVDLGRVVPGVTAYRRQRGAYLSLQAAY
Sequences:
>Translated_318_residues MRFRRRLAMRAFRAPVLAMLGMALSAPGGAETGKLPLTGGVSSISGAAGGGLTPWAVIGTNATEGEIGVSAFATRLRTRD YGLTSSGLALGLYDRVELSVARQDFGAAPASALNAVAPFGVEPDLHLKMDIVGAKVRLVGDAILDTDSPMPQISVGMEHK RLHPASAGSVIQFLGADTEGTDVYVSATKLLLDRNLLVHATLRSTNANQNGLLGFGGRGPARSGRSLQPEFSVAYLLRRD LAVGAEWRFKPDNLRALGRAAGLGDALREDDWRDIFVVWAPSKHLSITLAYVDLGRVVPGVTAYRRQRGAYLSLQAAY >Mature_318_residues MRFRRRLAMRAFRAPVLAMLGMALSAPGGAETGKLPLTGGVSSISGAAGGGLTPWAVIGTNATEGEIGVSAFATRLRTRD YGLTSSGLALGLYDRVELSVARQDFGAAPASALNAVAPFGVEPDLHLKMDIVGAKVRLVGDAILDTDSPMPQISVGMEHK RLHPASAGSVIQFLGADTEGTDVYVSATKLLLDRNLLVHATLRSTNANQNGLLGFGGRGPARSGRSLQPEFSVAYLLRRD LAVGAEWRFKPDNLRALGRAAGLGDALREDDWRDIFVVWAPSKHLSITLAYVDLGRVVPGVTAYRRQRGAYLSLQAAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33737; Mature: 33737
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFRRRLAMRAFRAPVLAMLGMALSAPGGAETGKLPLTGGVSSISGAAGGGLTPWAVIGT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEC NATEGEIGVSAFATRLRTRDYGLTSSGLALGLYDRVELSVARQDFGAAPASALNAVAPFG CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHEEHHHHCCCCCHHHHHHCCCCC VEPDLHLKMDIVGAKVRLVGDAILDTDSPMPQISVGMEHKRLHPASAGSVIQFLGADTEG CCCCCEEEEEEECEEEEEEEHHHCCCCCCCCEEECCCCHHHCCCCCCCCHHHHHCCCCCC TDVYVSATKLLLDRNLLVHATLRSTNANQNGLLGFGGRGPARSGRSLQPEFSVAYLLRRD CEEEEEEEEHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH LAVGAEWRFKPDNLRALGRAAGLGDALREDDWRDIFVVWAPSKHLSITLAYVDLGRVVPG HHCCCCEEECCHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCEEEEEEEEEHHHHCCC VTAYRRQRGAYLSLQAAY HHHHHHHCCCEEEEEECC >Mature Secondary Structure MRFRRRLAMRAFRAPVLAMLGMALSAPGGAETGKLPLTGGVSSISGAAGGGLTPWAVIGT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEC NATEGEIGVSAFATRLRTRDYGLTSSGLALGLYDRVELSVARQDFGAAPASALNAVAPFG CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHEEHHHHCCCCCHHHHHHCCCCC VEPDLHLKMDIVGAKVRLVGDAILDTDSPMPQISVGMEHKRLHPASAGSVIQFLGADTEG CCCCCEEEEEEECEEEEEEEHHHCCCCCCCCEEECCCCHHHCCCCCCCCHHHHHCCCCCC TDVYVSATKLLLDRNLLVHATLRSTNANQNGLLGFGGRGPARSGRSLQPEFSVAYLLRRD CEEEEEEEEHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH LAVGAEWRFKPDNLRALGRAAGLGDALREDDWRDIFVVWAPSKHLSITLAYVDLGRVVPG HHCCCCEEECCHHHHHHHHHCCCCHHHCCCCCCEEEEEEECCCCEEEEEEEEEHHHHCCC VTAYRRQRGAYLSLQAAY HHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA