Click here to switch to the map view.

The map label for this gene is trg [H]

Identifier: 120610640

GI number: 120610640

Start: 2130037

End: 2131965

Strand: Direct

Name: trg [H]

Synonym: Aave_1960

Alternate gene names: 120610640

Gene position: 2130037-2131965 (Clockwise)

Preceding gene: 120610639

Following gene: 120610642

Centisome position: 39.79

GC content: 70.14

Gene sequence:

>1929_bases
ATGACCCACTGGATCGGCAACCTGAAGTTTTCACGCAAGTTCGTGCTGATCGGATGCATTGCTTTCGCGATGTTCCTCCT
GCCTACCGTGTTGCTGATGCGCACCACGCTGGCCGACATCCAGACGGCGCTGCAGGAACGCAACGGGCTGGCTCCGGCGC
GCGAACTGCTCAAGCTGCTTCAGCTGACCCAGCAACATCGCGGACTGTCGGCATCCCTGCTCGGGGGGACGGACTCTGCC
GCGGCACCGCGCCAGGCCAAGCAGGCGGAGGTCGAGGCCTCCATCGGCCGCGCGAAGCAGGTCCTCGCGGGGCTGGGCGA
CAGCGCCCTGGGCCAGCGGCTCGACAGCATCCAGGGCGACTGGAACACGCTGGCCTCCGGCGTGGCGGGCAAGACCTTGC
GCGGCGCGGACAGCAACCGCATGCACGCGGCGCTCATCGAGCGGATGCTCGGGCTCATCGACGACGTGGCCAACAGCTCC
GGCCTGGCGCGCGATACCGACATCCGGACGCATTACCTGCAGAAGGCCGTTCTGGGGCAGTTGCCCCAGCTCACGGAATC
GCTGGGCCAGATGCGGGCGCGCGGCGCGCTGGTGCTGGCGCGCGGCGAAGTCGCTCCGGAGGAGCGGGCGCGCATCGAGG
CGCTGTCCGACCGGGTGCGCAAATACTACGGCGATGCCCGCAAGGCGCTCGAGCTGGCGGCCGGCGGCAGCCTGCCGGCC
ACGGTGGAGAAGGCCCGGGACGCCGCGCTGGCCGCGGCCCAGGAAGGGTTCAAGCTGGCCGACGACAACATCGTGAAGGC
CGACGTGTTGAGCATGCCGTCCACCGACTGGGTCGCGCGCATGACCCGCATCATCGACACCCAGTTCGAGCTGGTGGGCG
TGTCGTTCGATGTGCTGGAGCAATCGCTGGACAGCCAGATCGCGCGGATGCGCCAGAGCATGCTGGTGCTGGGGGCGGTG
CTGGCGGCGCTGGCGGCGGCGGCGCTGTGGATCATGGCCATGGTCACGCGCGCCACCACGCGTTCCATCGATGAGGCCGT
GCGGATCGCCGAGGCCGTGGCGGACGGCGACCTGACCGCGCAGGTCGAGCCCCAGGGCCGCGACGAGGTGGCCCGGCTGC
TGCACGCGCTCGCCGCCATGACCCGCAAGCTCGGGACGGTGGTGGGCACGGTGCGGCTCAATGCCGAGAACGTGGCCAGT
GCCAGCGTGCAGATCGCGCAGGGCAACGCCGACCTGAGCCAGCGCACCGAAAGCCAGGCCAGCGCACTGGAGCAGACGGC
TGCGTCCATGGAGGAGCTGGGCTCCACCGTACGGCAGAACGCGGACAACGCGCGGCAGGCGGACCAGCTCGCGCGCAGCG
CGGCCGGCGTGGCCGCGCAGGGCGGCACCGTGGTGCAGCAGGTGGTGGAGACGATGCGCGGCATCCATACCAGTTCGGCG
CGCATCGGCGACATCATCGGCGTGATCGACGGCATCGCGTTCCAGACCAACATCCTGGCGCTGAACGCGGCCGTGGAGGC
GGCCCGCGCGGGTGAGCAGGGCCGCGGCTTCGCGGTGGTCGCGGGCGAGGTGCGCAGTCTCGCGCAGCGCAGCGCCAGCG
CCGCCAAGGAGATCAAGGAACTGATCACGGCCAGTGTCGCCCAGGTGCAGAGCGGCACGGCACTGGTGGATCAGGCCGGC
ACGACCATGACCGAGATCGTGGATTCGATCCGCAAGGTGAGCGGCATCGTGGGCGAGATCACCTCCGCGACCGTGGAGCA
GAGCGAGGGCGTGGCCCAGGTGGGCGAGGCCGTGAGCCAGATGGACAACGCCACCCAGCAGAACGCGGCGCTGGTGGAGG
AAAGTGCCGCGGCGGCCAGCAGCCTGAAGTCGCAGGCCCAGCAGCTGGTCGATACCGTGGCCATGTTCCGGCTGAACGCG
AGCGCCTGA

Upstream 100 bases:

>100_bases
CTCGACGGGGCGTTTTTCCCGTTTTTGGGGAATGAGCTCCCGTTTTCCCATTTTTGCTGTTTATGGCAAGAATGCATTCA
ATTACCAAAAGTTTCAAGCC

Downstream 100 bases:

>100_bases
TCCGCCGTGCGGCAAAAGGCCCCGGCGCCGCGAGGCCCGGGGCCTTTCCTCATCCGGACCGGCCGATGCGCTTCAGGCGG
CGCGCCAGAAGATGTAGTCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 642; Mature: 641

Protein sequence:

>642_residues
MTHWIGNLKFSRKFVLIGCIAFAMFLLPTVLLMRTTLADIQTALQERNGLAPARELLKLLQLTQQHRGLSASLLGGTDSA
AAPRQAKQAEVEASIGRAKQVLAGLGDSALGQRLDSIQGDWNTLASGVAGKTLRGADSNRMHAALIERMLGLIDDVANSS
GLARDTDIRTHYLQKAVLGQLPQLTESLGQMRARGALVLARGEVAPEERARIEALSDRVRKYYGDARKALELAAGGSLPA
TVEKARDAALAAAQEGFKLADDNIVKADVLSMPSTDWVARMTRIIDTQFELVGVSFDVLEQSLDSQIARMRQSMLVLGAV
LAALAAAALWIMAMVTRATTRSIDEAVRIAEAVADGDLTAQVEPQGRDEVARLLHALAAMTRKLGTVVGTVRLNAENVAS
ASVQIAQGNADLSQRTESQASALEQTAASMEELGSTVRQNADNARQADQLARSAAGVAAQGGTVVQQVVETMRGIHTSSA
RIGDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSASAAKEIKELITASVAQVQSGTALVDQAG
TTMTEIVDSIRKVSGIVGEITSATVEQSEGVAQVGEAVSQMDNATQQNAALVEESAAAASSLKSQAQQLVDTVAMFRLNA
SA

Sequences:

>Translated_642_residues
MTHWIGNLKFSRKFVLIGCIAFAMFLLPTVLLMRTTLADIQTALQERNGLAPARELLKLLQLTQQHRGLSASLLGGTDSA
AAPRQAKQAEVEASIGRAKQVLAGLGDSALGQRLDSIQGDWNTLASGVAGKTLRGADSNRMHAALIERMLGLIDDVANSS
GLARDTDIRTHYLQKAVLGQLPQLTESLGQMRARGALVLARGEVAPEERARIEALSDRVRKYYGDARKALELAAGGSLPA
TVEKARDAALAAAQEGFKLADDNIVKADVLSMPSTDWVARMTRIIDTQFELVGVSFDVLEQSLDSQIARMRQSMLVLGAV
LAALAAAALWIMAMVTRATTRSIDEAVRIAEAVADGDLTAQVEPQGRDEVARLLHALAAMTRKLGTVVGTVRLNAENVAS
ASVQIAQGNADLSQRTESQASALEQTAASMEELGSTVRQNADNARQADQLARSAAGVAAQGGTVVQQVVETMRGIHTSSA
RIGDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSASAAKEIKELITASVAQVQSGTALVDQAG
TTMTEIVDSIRKVSGIVGEITSATVEQSEGVAQVGEAVSQMDNATQQNAALVEESAAAASSLKSQAQQLVDTVAMFRLNA
SA
>Mature_641_residues
THWIGNLKFSRKFVLIGCIAFAMFLLPTVLLMRTTLADIQTALQERNGLAPARELLKLLQLTQQHRGLSASLLGGTDSAA
APRQAKQAEVEASIGRAKQVLAGLGDSALGQRLDSIQGDWNTLASGVAGKTLRGADSNRMHAALIERMLGLIDDVANSSG
LARDTDIRTHYLQKAVLGQLPQLTESLGQMRARGALVLARGEVAPEERARIEALSDRVRKYYGDARKALELAAGGSLPAT
VEKARDAALAAAQEGFKLADDNIVKADVLSMPSTDWVARMTRIIDTQFELVGVSFDVLEQSLDSQIARMRQSMLVLGAVL
AALAAAALWIMAMVTRATTRSIDEAVRIAEAVADGDLTAQVEPQGRDEVARLLHALAAMTRKLGTVVGTVRLNAENVASA
SVQIAQGNADLSQRTESQASALEQTAASMEELGSTVRQNADNARQADQLARSAAGVAAQGGTVVQQVVETMRGIHTSSAR
IGDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSASAAKEIKELITASVAQVQSGTALVDQAGT
TMTEIVDSIRKVSGIVGEITSATVEQSEGVAQVGEAVSQMDNATQQNAALVEESAAAASSLKSQAQQLVDTVAMFRLNAS
A

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=326, Percent_Identity=53.680981595092, Blast_Score=307, Evalue=2e-84,
Organism=Escherichia coli, GI2367378, Length=323, Percent_Identity=57.5851393188854, Blast_Score=290, Evalue=2e-79,
Organism=Escherichia coli, GI1788195, Length=289, Percent_Identity=59.5155709342561, Blast_Score=288, Evalue=9e-79,
Organism=Escherichia coli, GI1788194, Length=364, Percent_Identity=48.3516483516484, Blast_Score=287, Evalue=2e-78,
Organism=Escherichia coli, GI1789453, Length=324, Percent_Identity=39.5061728395062, Blast_Score=209, Evalue=3e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 67454; Mature: 67322

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHWIGNLKFSRKFVLIGCIAFAMFLLPTVLLMRTTLADIQTALQERNGLAPARELLKLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QLTQQHRGLSASLLGGTDSAAAPRQAKQAEVEASIGRAKQVLAGLGDSALGQRLDSIQGD
HHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
WNTLASGVAGKTLRGADSNRMHAALIERMLGLIDDVANSSGLARDTDIRTHYLQKAVLGQ
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
LPQLTESLGQMRARGALVLARGEVAPEERARIEALSDRVRKYYGDARKALELAAGGSLPA
CHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TVEKARDAALAAAQEGFKLADDNIVKADVLSMPSTDWVARMTRIIDTQFELVGVSFDVLE
HHHHHHHHHHHHHHCCCEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
QSLDSQIARMRQSMLVLGAVLAALAAAALWIMAMVTRATTRSIDEAVRIAEAVADGDLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
QVEPQGRDEVARLLHALAAMTRKLGTVVGTVRLNAENVASASVQIAQGNADLSQRTESQA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHEEEECCCCCHHHHHHHHH
SALEQTAASMEELGSTVRQNADNARQADQLARSAAGVAAQGGTVVQQVVETMRGIHTSSA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCH
RIGDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSASAAKEIKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
LITASVAQVQSGTALVDQAGTTMTEIVDSIRKVSGIVGEITSATVEQSEGVAQVGEAVSQ
HHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
MDNATQQNAALVEESAAAASSLKSQAQQLVDTVAMFRLNASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
THWIGNLKFSRKFVLIGCIAFAMFLLPTVLLMRTTLADIQTALQERNGLAPARELLKLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
QLTQQHRGLSASLLGGTDSAAAPRQAKQAEVEASIGRAKQVLAGLGDSALGQRLDSIQGD
HHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
WNTLASGVAGKTLRGADSNRMHAALIERMLGLIDDVANSSGLARDTDIRTHYLQKAVLGQ
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
LPQLTESLGQMRARGALVLARGEVAPEERARIEALSDRVRKYYGDARKALELAAGGSLPA
CHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TVEKARDAALAAAQEGFKLADDNIVKADVLSMPSTDWVARMTRIIDTQFELVGVSFDVLE
HHHHHHHHHHHHHHCCCEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
QSLDSQIARMRQSMLVLGAVLAALAAAALWIMAMVTRATTRSIDEAVRIAEAVADGDLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
QVEPQGRDEVARLLHALAAMTRKLGTVVGTVRLNAENVASASVQIAQGNADLSQRTESQA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHEEEECCCCCHHHHHHHHH
SALEQTAASMEELGSTVRQNADNARQADQLARSAAGVAAQGGTVVQQVVETMRGIHTSSA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCH
RIGDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSASAAKEIKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
LITASVAQVQSGTALVDQAGTTMTEIVDSIRKVSGIVGEITSATVEQSEGVAQVGEAVSQ
HHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
MDNATQQNAALVEESAAAASSLKSQAQQLVDTVAMFRLNASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]