| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is gltI [H]
Identifier: 120610617
GI number: 120610617
Start: 2100427
End: 2101314
Strand: Direct
Name: gltI [H]
Synonym: Aave_1937
Alternate gene names: 120610617
Gene position: 2100427-2101314 (Clockwise)
Preceding gene: 120610615
Following gene: 120610623
Centisome position: 39.24
GC content: 64.53
Gene sequence:
>888_bases ATGAAAACCACCCTCTGCTCCGCCGCGCTGCTCGCCTGCGGCATGCTGGCCGGTGCCGCCGCCCAGGCCGACACTCTCAA GAAGATCGCGGACAGCGGCAAGATCACGCTCGCCTACCGCGAATCGTCGGTGCCCTTCAGCTACCTGGCCGGCGCGGGCG CACCCATCGGGTTCTCGGTGGACATCTCCAACGCGGTGGTGGATGCGGTGAAGAAGAAGCTGAACAAGCCCGACCTCAAG GTCGAGCTGCAGGCCGTGACCTCGCAGAACCGCATCCCGCTGGTGACCAACGGCACGGTGGACCTGGAGTGCGGCTCCAC CACCAACAACACCGCGCGCGCCAAGGACGTGCAGTTCGCCGTCAACTACTTCTACACCGGCACGCGCCTGCTCGTGAAGA AATCCTCGGGCGTGAAGAACTACGCCGACCTCGCGAAGAAGACCGTGGCCAGCACCACCGGCACCACCAACGCCCAGGTG ATCCGCAAGTACAACCGCGACAACAACCTCGAGATGGACATCATCCTGGGCAAGGACCACAACGACTCCATGCTGCTGGT GGATACGGGCCGGGCGCTGGCGTTCGCGATGGACGACATCCTGCTCTTCGGCCTGAAGGCCAATGCCGTGAACCCGGCCG AATGGGACGTGGTCGGGGACGCACTGCAGGTCGAGCCCTATGCCTGCATGCTGCGCAAGGACGACCCGCAGTTCCAGGCG CTGGTCAACGGCGTGATCGGCGGCATGATGAAGTCCGGCGAATTCGAGAAGCTCTACAACAAGTGGTTCCTCTCGCCCAT CGCGCCCAAGGGCCAGGCACTGGGCCTGCCGATGTCGAAGGAACTGCGCGACAACCTCACGGCGCAGAGCGACAAGCCCG CGGTCTGA
Upstream 100 bases:
>100_bases CGGAATGAATTGTTCAAGCCGGGGCCGTCTTCCTACAGTGCCTGCACCGCCGCGCTGCGCCGGGCCCGAGCCGTCCGCTT TTTCCATCCAAGGAGTTCCC
Downstream 100 bases:
>100_bases CGGCGCCGGCCGGACGCCCGGGGGCGCGCCACCTTCAGCCCCAGAGCGCCGGCTTGGCCACCATCATGTAGTAGATCGCG AGCATGGCGATGAAGGCCGG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKTTLCSAALLACGMLAGAAAQADTLKKIADSGKITLAYRESSVPFSYLAGAGAPIGFSVDISNAVVDAVKKKLNKPDLK VELQAVTSQNRIPLVTNGTVDLECGSTTNNTARAKDVQFAVNYFYTGTRLLVKKSSGVKNYADLAKKTVASTTGTTNAQV IRKYNRDNNLEMDIILGKDHNDSMLLVDTGRALAFAMDDILLFGLKANAVNPAEWDVVGDALQVEPYACMLRKDDPQFQA LVNGVIGGMMKSGEFEKLYNKWFLSPIAPKGQALGLPMSKELRDNLTAQSDKPAV
Sequences:
>Translated_295_residues MKTTLCSAALLACGMLAGAAAQADTLKKIADSGKITLAYRESSVPFSYLAGAGAPIGFSVDISNAVVDAVKKKLNKPDLK VELQAVTSQNRIPLVTNGTVDLECGSTTNNTARAKDVQFAVNYFYTGTRLLVKKSSGVKNYADLAKKTVASTTGTTNAQV IRKYNRDNNLEMDIILGKDHNDSMLLVDTGRALAFAMDDILLFGLKANAVNPAEWDVVGDALQVEPYACMLRKDDPQFQA LVNGVIGGMMKSGEFEKLYNKWFLSPIAPKGQALGLPMSKELRDNLTAQSDKPAV >Mature_295_residues MKTTLCSAALLACGMLAGAAAQADTLKKIADSGKITLAYRESSVPFSYLAGAGAPIGFSVDISNAVVDAVKKKLNKPDLK VELQAVTSQNRIPLVTNGTVDLECGSTTNNTARAKDVQFAVNYFYTGTRLLVKKSSGVKNYADLAKKTVASTTGTTNAQV IRKYNRDNNLEMDIILGKDHNDSMLLVDTGRALAFAMDDILLFGLKANAVNPAEWDVVGDALQVEPYACMLRKDDPQFQA LVNGVIGGMMKSGEFEKLYNKWFLSPIAPKGQALGLPMSKELRDNLTAQSDKPAV
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=268, Percent_Identity=49.6268656716418, Blast_Score=271, Evalue=4e-74, Organism=Escherichia coli, GI1787031, Length=233, Percent_Identity=26.6094420600858, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 31648; Mature: 31648
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTLCSAALLACGMLAGAAAQADTLKKIADSGKITLAYRESSVPFSYLAGAGAPIGFSV CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCEEEEE DISNAVVDAVKKKLNKPDLKVELQAVTSQNRIPLVTNGTVDLECGSTTNNTARAKDVQFA EHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCEEEEEECCCCCCCCCHHHHEEE VNYFYTGTRLLVKKSSGVKNYADLAKKTVASTTGTTNAQVIRKYNRDNNLEMDIILGKDH EEEEEECEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEECCC NDSMLLVDTGRALAFAMDDILLFGLKANAVNPAEWDVVGDALQVEPYACMLRKDDPQFQA CCCEEEEECCCEEEHHHHHHHEEEEECCCCCCCHHHEECCEEEECCEEEEEECCCHHHHH LVNGVIGGMMKSGEFEKLYNKWFLSPIAPKGQALGLPMSKELRDNLTAQSDKPAV HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEECCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKTTLCSAALLACGMLAGAAAQADTLKKIADSGKITLAYRESSVPFSYLAGAGAPIGFSV CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCEEEEE DISNAVVDAVKKKLNKPDLKVELQAVTSQNRIPLVTNGTVDLECGSTTNNTARAKDVQFA EHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCEEEEEECCCCCCCCCHHHHEEE VNYFYTGTRLLVKKSSGVKNYADLAKKTVASTTGTTNAQVIRKYNRDNNLEMDIILGKDH EEEEEECEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEECCC NDSMLLVDTGRALAFAMDDILLFGLKANAVNPAEWDVVGDALQVEPYACMLRKDDPQFQA CCCEEEEECCCEEEHHHHHHHEEEEECCCCCCCHHHEECCEEEECCEEEEEECCCHHHHH LVNGVIGGMMKSGEFEKLYNKWFLSPIAPKGQALGLPMSKELRDNLTAQSDKPAV HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEECCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]