| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610607
Identifier: 120610607
GI number: 120610607
Start: 2089006
End: 2089821
Strand: Reverse
Name: 120610607
Synonym: Aave_1927
Alternate gene names: NA
Gene position: 2089821-2089006 (Counterclockwise)
Preceding gene: 120610608
Following gene: 120610606
Centisome position: 39.04
GC content: 71.2
Gene sequence:
>816_bases ATGAAACTGCACATCGTCCCTGCCCGCGCCGGCCTGGAATGGGTCCGCCTCGGCATTCGCATCTTCTGGCGCCAGCCGAT GGCGCTGGCGGCCCTGTTCTTCCTGACCATGGCGGCGATGTCCATCGCCACGCTGCTGCCGCTCGTCGGGCCCGCCGTGG CCCTGGCACTGCTGCCCTCCGCCACGCTGGCCATGATGGTGGCCGCCGGCGACGCCACGCAGGGACGCTTTCCCACCCCG GCCCTGCTGCTGGTGGCCTTCCGCACCGGCCGGCAGCGCCTGCGCTCCATGCTCGTGCTCGGCGCGCTCTATGCCGTCGG CTTCCTCGCCGTCATGGCCATCTCCGCGCTGCTGGACGGCGGACAGTTCGCGCGCGTGTACCTGGGCGGCGAGGAGCTCA CGCGCGAAATGGCCGAACTGCCGCAGTTCCAGGCGGCGATGTGGCTCGCGCTGGCGCTCTACGTTCCGCTGTCGCTGCTC TTCTGGCACGCGCCCGGCCTGGTGCACTGGCACGGCGTGCCGCCGGTGAAGGCGCTGTTCTTCAGCATCGTCGCCTGCCT GCGCAACATCGGGGCGTTCACCGTGTACGGCCTTGCATGGACGGGGGTCTTCCTGGGCGCGGGCATCGCCGCCAGCGTAT TCGTGACGCTGCTGGCCCTCATGGGCCTGGGCAGCGCGCTCGCGGCGGGCATCATGGTCGGCACGGCCATGCTGCTGGCC GCCATGTTCTTCACGTCGGTGGTGTTCTCGTTCCGCGACTGCTTCGAGCCGCCCGAGCGTCCCGCCGCGCTGGAGGACGC CCCGGGCGCGGCCTGA
Upstream 100 bases:
>100_bases CGCCGCGGCATGCCCTGGAGCCATGCCCGCCGGCGCGACCGCGCCTCCCGCGAAGCGCCCAGCCACTGCCCGACGGGCGT AACACGCACACTGCACCGCC
Downstream 100 bases:
>100_bases AGGGCCGCCCGGCGCGCGTCACGCCGCCGTCACGCAATCGTCAAATCCGTGTCATCGCGGATTCCTAGCATCCGGACCGA CGGCAGGCCCGGGTTCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Transporter
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKLHIVPARAGLEWVRLGIRIFWRQPMALAALFFLTMAAMSIATLLPLVGPAVALALLPSATLAMMVAAGDATQGRFPTP ALLLVAFRTGRQRLRSMLVLGALYAVGFLAVMAISALLDGGQFARVYLGGEELTREMAELPQFQAAMWLALALYVPLSLL FWHAPGLVHWHGVPPVKALFFSIVACLRNIGAFTVYGLAWTGVFLGAGIAASVFVTLLALMGLGSALAAGIMVGTAMLLA AMFFTSVVFSFRDCFEPPERPAALEDAPGAA
Sequences:
>Translated_271_residues MKLHIVPARAGLEWVRLGIRIFWRQPMALAALFFLTMAAMSIATLLPLVGPAVALALLPSATLAMMVAAGDATQGRFPTP ALLLVAFRTGRQRLRSMLVLGALYAVGFLAVMAISALLDGGQFARVYLGGEELTREMAELPQFQAAMWLALALYVPLSLL FWHAPGLVHWHGVPPVKALFFSIVACLRNIGAFTVYGLAWTGVFLGAGIAASVFVTLLALMGLGSALAAGIMVGTAMLLA AMFFTSVVFSFRDCFEPPERPAALEDAPGAA >Mature_271_residues MKLHIVPARAGLEWVRLGIRIFWRQPMALAALFFLTMAAMSIATLLPLVGPAVALALLPSATLAMMVAAGDATQGRFPTP ALLLVAFRTGRQRLRSMLVLGALYAVGFLAVMAISALLDGGQFARVYLGGEELTREMAELPQFQAAMWLALALYVPLSLL FWHAPGLVHWHGVPPVKALFFSIVACLRNIGAFTVYGLAWTGVFLGAGIAASVFVTLLALMGLGSALAAGIMVGTAMLLA AMFFTSVVFSFRDCFEPPERPAALEDAPGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28777; Mature: 28777
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLHIVPARAGLEWVRLGIRIFWRQPMALAALFFLTMAAMSIATLLPLVGPAVALALLPS CEEEEEECHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLAMMVAAGDATQGRFPTPALLLVAFRTGRQRLRSMLVLGALYAVGFLAVMAISALLDG HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GQFARVYLGGEELTREMAELPQFQAAMWLALALYVPLSLLFWHAPGLVHWHGVPPVKALF CCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHH FSIVACLRNIGAFTVYGLAWTGVFLGAGIAASVFVTLLALMGLGSALAAGIMVGTAMLLA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AMFFTSVVFSFRDCFEPPERPAALEDAPGAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLHIVPARAGLEWVRLGIRIFWRQPMALAALFFLTMAAMSIATLLPLVGPAVALALLPS CEEEEEECHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLAMMVAAGDATQGRFPTPALLLVAFRTGRQRLRSMLVLGALYAVGFLAVMAISALLDG HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GQFARVYLGGEELTREMAELPQFQAAMWLALALYVPLSLLFWHAPGLVHWHGVPPVKALF CCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHH FSIVACLRNIGAFTVYGLAWTGVFLGAGIAASVFVTLLALMGLGSALAAGIMVGTAMLLA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AMFFTSVVFSFRDCFEPPERPAALEDAPGAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA