| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610546
Identifier: 120610546
GI number: 120610546
Start: 2022592
End: 2023809
Strand: Direct
Name: 120610546
Synonym: Aave_1866
Alternate gene names: NA
Gene position: 2022592-2023809 (Clockwise)
Preceding gene: 120610545
Following gene: 120610547
Centisome position: 37.79
GC content: 69.46
Gene sequence:
>1218_bases ATGCCGTCCTCCCCCACGTCCGCTCCGCCGCTTTCCTCCGTGCCACCCGCCACGCCTGCGGCATCCGCCGCATCGGCCAC GCCACGCCTGGTGTCCATCGATGCACTGCGCGGCCTGGTGATCGTCTTCATGCTGCTCGACCACGTGCGCGAAACGTTCT TCATGCACCACCAGGTCACGGATCCGATGGCGGTGGCCGACACGCCGCCGGCCGTGTTCTTCAGTCGCCTGCTGGCGCAC CTGTGCGCGCCGGTCTTCATCTTTCTCGCAGGGCTGTCCGCGTGTCTCTATGGGAGCCGCCAGCCGGACGGGCGCCGGGC CGCCACCGTGTTCCTCGCGCAGCGCGGGCTCTTCCTGGTGGTGCTGGAACTCACGGTGGTGAATTTCGCGTGGACCTTCC AGTGGCCACCGCAGGTCGTCTATCTGCAGGTGATCTGGGTCATCGGCCTGAGCATGCTGGCGCTGGCCCTGCTGCTGTGG CTGCCGCGCGGCGTGCTCGTGGCGGTGGGGCTGTTGCTGGTGGCGGGCCACAACCTGCTCGACGGCGTGCACTTTCCCGC AGGGCATGCCCTGCACGTGCCGTGGGCCATCCTGCACGACCGGGGATGGCTCGCATTGGGCGACGGCCTGCGGATGCGCA CGTCCTATCCGCTGCTGCCCTGGATCGGCGTGATCGCGCTGGGGTATGCCGCGGGCCCCTGGTTCACCGCCGGGGCAGGC GCGGGGCAGCGGCGCCGTCGCCTGGTGGCCTGGTCGGCGGGTGCGCTGGCGTTGTTCATGGCGCTGCGGTGGCTGAACGC CTATGGCGACCATCCCCGGGCCGTGGGTGCCACGCCGCTGGAAACCGTGATGGGTTTCCTGAACGTGACGAAGTACCCGC CCTCGCTGCTCTTCGTGGCGCTGACGTTGGGGATCGGCCTGGCACTGCTCGCGGCCTTCGAGCGCGTGCCGGCGCGGGCG GGGTGGATGCGGGTGCTGGTGGCCTTCGGGGCCGCGCCCATGTTCTTCTATGTGCTGCACCTGTATGTGCTGAAGGTGCT CTACCTCGGCGCGCTGGGACTCTGGGGGCCCAACCAGGGGCGCTATTTCGGTTTCGACGCGGTGTGGCAGGTGTGGCTCT GCACGGCGGTGCTGGCCACGCTGCTCTACGGGCCCGTGCGTGCCTTCGGGACCTTCAAGGCGCGGCGAAAAGACCTGGCC TGGCTGCGGTTCCTGTAG
Upstream 100 bases:
>100_bases GGCCGATGCATATCGCGCCTGGGCGCACCAAAGCCGCAGCGAGCGATCGTTGCGGCTTTTTTCTTGCCTCCCGCTTTCCC GTCACCGCGTACTCCCGCCG
Downstream 100 bases:
>100_bases AGCGTGCAGCCCCGGGGTCCGGGCGCATGCCGGCCAAGCTTTCCGCACAGGGGCATCTGCGCGCGCGCTTCGGCGAGGGC CGGCGCGGGGCTTTTCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MPSSPTSAPPLSSVPPATPAASAASATPRLVSIDALRGLVIVFMLLDHVRETFFMHHQVTDPMAVADTPPAVFFSRLLAH LCAPVFIFLAGLSACLYGSRQPDGRRAATVFLAQRGLFLVVLELTVVNFAWTFQWPPQVVYLQVIWVIGLSMLALALLLW LPRGVLVAVGLLLVAGHNLLDGVHFPAGHALHVPWAILHDRGWLALGDGLRMRTSYPLLPWIGVIALGYAAGPWFTAGAG AGQRRRRLVAWSAGALALFMALRWLNAYGDHPRAVGATPLETVMGFLNVTKYPPSLLFVALTLGIGLALLAAFERVPARA GWMRVLVAFGAAPMFFYVLHLYVLKVLYLGALGLWGPNQGRYFGFDAVWQVWLCTAVLATLLYGPVRAFGTFKARRKDLA WLRFL
Sequences:
>Translated_405_residues MPSSPTSAPPLSSVPPATPAASAASATPRLVSIDALRGLVIVFMLLDHVRETFFMHHQVTDPMAVADTPPAVFFSRLLAH LCAPVFIFLAGLSACLYGSRQPDGRRAATVFLAQRGLFLVVLELTVVNFAWTFQWPPQVVYLQVIWVIGLSMLALALLLW LPRGVLVAVGLLLVAGHNLLDGVHFPAGHALHVPWAILHDRGWLALGDGLRMRTSYPLLPWIGVIALGYAAGPWFTAGAG AGQRRRRLVAWSAGALALFMALRWLNAYGDHPRAVGATPLETVMGFLNVTKYPPSLLFVALTLGIGLALLAAFERVPARA GWMRVLVAFGAAPMFFYVLHLYVLKVLYLGALGLWGPNQGRYFGFDAVWQVWLCTAVLATLLYGPVRAFGTFKARRKDLA WLRFL >Mature_404_residues PSSPTSAPPLSSVPPATPAASAASATPRLVSIDALRGLVIVFMLLDHVRETFFMHHQVTDPMAVADTPPAVFFSRLLAHL CAPVFIFLAGLSACLYGSRQPDGRRAATVFLAQRGLFLVVLELTVVNFAWTFQWPPQVVYLQVIWVIGLSMLALALLLWL PRGVLVAVGLLLVAGHNLLDGVHFPAGHALHVPWAILHDRGWLALGDGLRMRTSYPLLPWIGVIALGYAAGPWFTAGAGA GQRRRRLVAWSAGALALFMALRWLNAYGDHPRAVGATPLETVMGFLNVTKYPPSLLFVALTLGIGLALLAAFERVPARAG WMRVLVAFGAAPMFFYVLHLYVLKVLYLGALGLWGPNQGRYFGFDAVWQVWLCTAVLATLLYGPVRAFGTFKARRKDLAW LRFL
Specific function: Unknown
COG id: COG3503
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44165; Mature: 44034
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSPTSAPPLSSVPPATPAASAASATPRLVSIDALRGLVIVFMLLDHVRETFFMHHQVT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPMAVADTPPAVFFSRLLAHLCAPVFIFLAGLSACLYGSRQPDGRRAATVFLAQRGLFLV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHH VLELTVVNFAWTFQWPPQVVYLQVIWVIGLSMLALALLLWLPRGVLVAVGLLLVAGHNLL HHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH DGVHFPAGHALHVPWAILHDRGWLALGDGLRMRTSYPLLPWIGVIALGYAAGPWFTAGAG CCCCCCCCCEEECCHHEEECCCCEEECCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCC AGQRRRRLVAWSAGALALFMALRWLNAYGDHPRAVGATPLETVMGFLNVTKYPPSLLFVA CCHHHCEEHEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH LTLGIGLALLAAFERVPARAGWMRVLVAFGAAPMFFYVLHLYVLKVLYLGALGLWGPNQG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RYFGFDAVWQVWLCTAVLATLLYGPVRAFGTFKARRKDLAWLRFL CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSSPTSAPPLSSVPPATPAASAASATPRLVSIDALRGLVIVFMLLDHVRETFFMHHQVT CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPMAVADTPPAVFFSRLLAHLCAPVFIFLAGLSACLYGSRQPDGRRAATVFLAQRGLFLV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHH VLELTVVNFAWTFQWPPQVVYLQVIWVIGLSMLALALLLWLPRGVLVAVGLLLVAGHNLL HHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH DGVHFPAGHALHVPWAILHDRGWLALGDGLRMRTSYPLLPWIGVIALGYAAGPWFTAGAG CCCCCCCCCEEECCHHEEECCCCEEECCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCC AGQRRRRLVAWSAGALALFMALRWLNAYGDHPRAVGATPLETVMGFLNVTKYPPSLLFVA CCHHHCEEHEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH LTLGIGLALLAAFERVPARAGWMRVLVAFGAAPMFFYVLHLYVLKVLYLGALGLWGPNQG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RYFGFDAVWQVWLCTAVLATLLYGPVRAFGTFKARRKDLAWLRFL CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA