| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is gltX
Identifier: 120610545
GI number: 120610545
Start: 2020280
End: 2021716
Strand: Direct
Name: gltX
Synonym: Aave_1865
Alternate gene names: 120610545
Gene position: 2020280-2021716 (Clockwise)
Preceding gene: 120610544
Following gene: 120610546
Centisome position: 37.74
GC content: 68.06
Gene sequence:
>1437_bases ATGAGCCAAAGCCTTTCTTCCGCTTCCTCCAGCGGCGCGCCGCAGCGCGTGCGCACCCGTTTCGCGCCGTCCCCCACGGG CTTCATCCACCTGGGCAACATCCGCTCGGCGCTCTACCCGTGGGCGTTCGCGCGCGCCACGGGCGGCGACTTCATCCTGC GCATCGAGGACACCGACGTGGAGCGTTCGAGCCAGGCCGCCGTGGATGTCATCCTGGAAGGCATGCAGTGGCTGGGCATG GAGCCGGACGAAGGCCCGTTCTACCAGATGCAGCGCATGGACCGCTACAAGGAAGTGCTGGCGCAGATGCAGGCGCAGGG CCTGGTCTATCCGTGCTACATGAGCGTGGCGGAGCTCGACGCGCTGCGCGAGCGCCAGATGCAGGCCAAGCAGAAGCCGC GCTACGACGGCACGTGGCGCCCGGAGGAGGGCAAGACGCTGCCGCCGGTGCCCGAGGGCGTGCAGCCGGTGCTGCGCTTC CGCAATCCCGTCGGCGGCTCCGTGGTCTGGGAAGACAAGGTCAAGGGCCGCATCGAGATCCAGAACGACGAGCTCGACGA CCTCGTCATCGCGCGTCCGGACGGCACGCCCACGTACAACTTCTGCGTGGTGGTGGACGACATCGACATGGCCATCACCC ACGTGATCCGCGGTGACGACCACGTCAACAACACGCCGCGCCAGATCAACATCTTCCGCGCGCTCGGCAAGGAGCCGCCG GTGTATGCCCACCTGCCCACCGTGCTCAACGAGCAGGGCGAGAAGATGAGCAAGCGCAACGGCGCCAAGCCCGTCACGCA GTACCGCGACGAAGGCTACCTGCCCGAGGCGATGGTGAACTACCTCGCGCGCCTGGGCTGGAGCCATGGCGACGACGAAA TCTTCTCGCGCGAGCAGTTCCTGGAATGGTTCGACCTGGACCACCTGGGCCGCAGCGCGGCGCAGTTCGACGAGGCCAAG CTGCGCTGGGTGAACGCCCAGCACCTGAAGGCCACGGCCGACGAGCGTCTGGCCGAGCTGGTGGCGCCGCGCCTCGCGGC CCGCGGCATCGCGCAGTCCGAACTGGCTGACGGCCGGCTGCCACGCATCTGCGCGCTCTTCAAGGACCGCTGCGACACGC TGGTGGCGCTGGCCGACTGGGCCCATGTGTTCTACGGCGAAGTGACCCCGAACGAGGAGGAACGCGCCAAGCACGTGGTG GACGCGGTGAAGCCGGCGATCGCCGCGCTCTCGGATGCGCTCGCGCAGTGCGCCTGGGACAAGGCCAGCATCGCCGCCGC CTTCAAGGAAGTGCTGGCCGCGCAGGGCCTCAAGATGCCCCAATTGGCCATGCCGGTGCGCGTGCTCACCGTGGGCACGG CGCACACGCCGTCGGTCGATGCGGTGCTCGAACTGCTCGGACGCGAAAAAATTGCAGCGAGATTGCGAACGGCCTGA
Upstream 100 bases:
>100_bases AGGCCGCCGGCATCGGCCAGGGGCTGATCCGCGTGGCCGTCGGCCTGGAACACATCGAAGACCTGAAGGCCGACCTCGCG CGCGGCCTGGATACCCTGCA
Downstream 100 bases:
>100_bases AAACCTGTCTATAATTCAAGGCTGAGGAGATGACGACGATAAATAACAATATCGACGGCATCGAAGTGGGGGTATAGCTC AGCTGGGAGAGCGCTTGCAT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MSQSLSSASSSGAPQRVRTRFAPSPTGFIHLGNIRSALYPWAFARATGGDFILRIEDTDVERSSQAAVDVILEGMQWLGM EPDEGPFYQMQRMDRYKEVLAQMQAQGLVYPCYMSVAELDALRERQMQAKQKPRYDGTWRPEEGKTLPPVPEGVQPVLRF RNPVGGSVVWEDKVKGRIEIQNDELDDLVIARPDGTPTYNFCVVVDDIDMAITHVIRGDDHVNNTPRQINIFRALGKEPP VYAHLPTVLNEQGEKMSKRNGAKPVTQYRDEGYLPEAMVNYLARLGWSHGDDEIFSREQFLEWFDLDHLGRSAAQFDEAK LRWVNAQHLKATADERLAELVAPRLAARGIAQSELADGRLPRICALFKDRCDTLVALADWAHVFYGEVTPNEEERAKHVV DAVKPAIAALSDALAQCAWDKASIAAAFKEVLAAQGLKMPQLAMPVRVLTVGTAHTPSVDAVLELLGREKIAARLRTA
Sequences:
>Translated_478_residues MSQSLSSASSSGAPQRVRTRFAPSPTGFIHLGNIRSALYPWAFARATGGDFILRIEDTDVERSSQAAVDVILEGMQWLGM EPDEGPFYQMQRMDRYKEVLAQMQAQGLVYPCYMSVAELDALRERQMQAKQKPRYDGTWRPEEGKTLPPVPEGVQPVLRF RNPVGGSVVWEDKVKGRIEIQNDELDDLVIARPDGTPTYNFCVVVDDIDMAITHVIRGDDHVNNTPRQINIFRALGKEPP VYAHLPTVLNEQGEKMSKRNGAKPVTQYRDEGYLPEAMVNYLARLGWSHGDDEIFSREQFLEWFDLDHLGRSAAQFDEAK LRWVNAQHLKATADERLAELVAPRLAARGIAQSELADGRLPRICALFKDRCDTLVALADWAHVFYGEVTPNEEERAKHVV DAVKPAIAALSDALAQCAWDKASIAAAFKEVLAAQGLKMPQLAMPVRVLTVGTAHTPSVDAVLELLGREKIAARLRTA >Mature_477_residues SQSLSSASSSGAPQRVRTRFAPSPTGFIHLGNIRSALYPWAFARATGGDFILRIEDTDVERSSQAAVDVILEGMQWLGME PDEGPFYQMQRMDRYKEVLAQMQAQGLVYPCYMSVAELDALRERQMQAKQKPRYDGTWRPEEGKTLPPVPEGVQPVLRFR NPVGGSVVWEDKVKGRIEIQNDELDDLVIARPDGTPTYNFCVVVDDIDMAITHVIRGDDHVNNTPRQINIFRALGKEPPV YAHLPTVLNEQGEKMSKRNGAKPVTQYRDEGYLPEAMVNYLARLGWSHGDDEIFSREQFLEWFDLDHLGRSAAQFDEAKL RWVNAQHLKATADERLAELVAPRLAARGIAQSELADGRLPRICALFKDRCDTLVALADWAHVFYGEVTPNEEERAKHVVD AVKPAIAALSDALAQCAWDKASIAAAFKEVLAAQGLKMPQLAMPVRVLTVGTAHTPSVDAVLELLGREKIAARLRTA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=328, Percent_Identity=35.6707317073171, Blast_Score=206, Evalue=5e-53, Organism=Escherichia coli, GI1788743, Length=466, Percent_Identity=44.8497854077253, Blast_Score=422, Evalue=1e-119, Organism=Escherichia coli, GI226510925, Length=285, Percent_Identity=34.7368421052632, Blast_Score=142, Evalue=7e-35, Organism=Caenorhabditis elegans, GI71993394, Length=477, Percent_Identity=27.4633123689727, Blast_Score=184, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6324540, Length=331, Percent_Identity=36.5558912386707, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6321192, Length=215, Percent_Identity=27.4418604651163, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI24665321, Length=502, Percent_Identity=29.0836653386454, Blast_Score=210, Evalue=2e-54,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_ACIAC (A1TNB1)
Other databases:
- EMBL: CP000512 - RefSeq: YP_970223.1 - ProteinModelPortal: A1TNB1 - SMR: A1TNB1 - STRING: A1TNB1 - GeneID: 4666363 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_1865 - NMPDR: fig|397945.5.peg.1615 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: NGSGIRD - PhylomeDB: A1TNB1 - ProtClustDB: PRK01406 - BioCyc: AAVE397945:AAVE_1865-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 53282; Mature: 53151
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 258-258
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSLSSASSSGAPQRVRTRFAPSPTGFIHLGNIRSALYPWAFARATGGDFILRIEDTDV CCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCC ERSSQAAVDVILEGMQWLGMEPDEGPFYQMQRMDRYKEVLAQMQAQGLVYPCYMSVAELD CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALRERQMQAKQKPRYDGTWRPEEGKTLPPVPEGVQPVLRFRNPVGGSVVWEDKVKGRIEI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCEEEE QNDELDDLVIARPDGTPTYNFCVVVDDIDMAITHVIRGDDHVNNTPRQINIFRALGKEPP CCCCCCCEEEECCCCCCCEEEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC VYAHLPTVLNEQGEKMSKRNGAKPVTQYRDEGYLPEAMVNYLARLGWSHGDDEIFSREQF CEEECHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH LEWFDLDHLGRSAAQFDEAKLRWVNAQHLKATADERLAELVAPRLAARGIAQSELADGRL HHHHCHHHHCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC PRICALFKDRCDTLVALADWAHVFYGEVTPNEEERAKHVVDAVKPAIAALSDALAQCAWD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KASIAAAFKEVLAAQGLKMPQLAMPVRVLTVGTAHTPSVDAVLELLGREKIAARLRTA HHHHHHHHHHHHHHCCCCCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQSLSSASSSGAPQRVRTRFAPSPTGFIHLGNIRSALYPWAFARATGGDFILRIEDTDV CCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCC ERSSQAAVDVILEGMQWLGMEPDEGPFYQMQRMDRYKEVLAQMQAQGLVYPCYMSVAELD CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALRERQMQAKQKPRYDGTWRPEEGKTLPPVPEGVQPVLRFRNPVGGSVVWEDKVKGRIEI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCEEEE QNDELDDLVIARPDGTPTYNFCVVVDDIDMAITHVIRGDDHVNNTPRQINIFRALGKEPP CCCCCCCEEEECCCCCCCEEEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC VYAHLPTVLNEQGEKMSKRNGAKPVTQYRDEGYLPEAMVNYLARLGWSHGDDEIFSREQF CEEECHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH LEWFDLDHLGRSAAQFDEAKLRWVNAQHLKATADERLAELVAPRLAARGIAQSELADGRL HHHHCHHHHCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC PRICALFKDRCDTLVALADWAHVFYGEVTPNEEERAKHVVDAVKPAIAALSDALAQCAWD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KASIAAAFKEVLAAQGLKMPQLAMPVRVLTVGTAHTPSVDAVLELLGREKIAARLRTA HHHHHHHHHHHHHHCCCCCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA