| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610532
Identifier: 120610532
GI number: 120610532
Start: 2008008
End: 2009057
Strand: Reverse
Name: 120610532
Synonym: Aave_1852
Alternate gene names: NA
Gene position: 2009057-2008008 (Counterclockwise)
Preceding gene: 120610533
Following gene: 120610528
Centisome position: 37.53
GC content: 71.9
Gene sequence:
>1050_bases ATGCCCTTTCCGCCGCCTTCGTCATCCCGCCCCGCGGCGCTGCATGCGGAGGGCCCCGACAGCGAATACGAGGACCTGCT CGGCCTGTGGTCCGACCTGGAATCCGCGCTGTCCGTCCTGCTCTCGCGGCCCGGCAGCGTGGTGGGCTTCGCCGCCAAGA TGCGCCAGTGCGACGCCTGGCTGCAGGACCTCGTCGCACACGACACGGATGCGGCGCTCTACCTGATGTTCCAGCTCGCG GCCACCTCCAGCGTGGGCTACAGCGCCTCGCACGCGCTGGTCTGCGGAACGCTCTGCCACATCCTCGCGCACGAGCTGAA GCTGCCGCCCGCCGAACGCGACAGCCTGGTGCGCGCGGCCATGACGATGAACATCGGCATGACGGCGCTGCAGGACGAAC TGGCCAACCAGCGGGAGCGCCCGTCGGCCACCCAGCAGAAAGCCATCGACGAACATCCCCGGCGCAGCCGGATCCTGCTG GAGCAGCTGGGCATCGGCGACACGCTGTGGCTCGAGGTGGTGGGACACCACCATGCGCCGCTCGCCGAGGGGGATGCGGG ATCGCTCTCCACGTTGCCGGCGGCACGGCGGCTCACCCGCATCCTGGGCACGATCGACCGCTACGCGGCCATGATCAGCC CCCGCAAGTCCCGGGCGGGGCGCAGCGCCACGGATTCGGTGCGCGCCATCGTGGGCCACGACGACGAGCGCCGCGACGAG GTCACGTATGCGCTCGTGCGCTCCGTCGGGCTGTGCCCGCCGGGCACGTTCGTGCGGCTGGACAACGGCGAGACCGCGCT GGTGCTGCGCCGCAGCGAGAAGATCAACTCTCCGCTGGTGGCCAGCGTGATCGACCGCCAGGGAGAGCAGAGGCGCCAGC CCGCGCTGCACCAGACCGCCACGGGACGCCCGCGCATCCAGTCGGCCCTGGCGCGCTCGGCCGTGCAGGTGGAACTGGAC CACCGCCTGCTGGTGCGCCTCGGGCTCTATGCCGCCCGCCAGTACCGCGGCATCGTGGGGCTGGTGGGCGCCCCCGGCGC ACCGCGCTGA
Upstream 100 bases:
>100_bases CCTACGTGCTGCTGGGCAACAGCGCCCTCAACGAATTCCAGATGAGCCGGTCGGGCGACCGGCTGGTGCTGGAAAAGCGG CACTAGGGCCTGTTAACGCC
Downstream 100 bases:
>100_bases TCAGGACTTGTTCTTCCTACCCAGGCGCGATTCGGTGCCGGCGACGAGGCGGCGGATGTTCTCGCGGTGGCGCCAGACCA GCAGCGCCGACATGGCGGTG
Product: putative metal dependent phosphohydrolase
Products: NA
Alternate protein names: HD-GYP Domain-Containing Protein; HD-GYP Domain-Like Protein
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MPFPPPSSSRPAALHAEGPDSEYEDLLGLWSDLESALSVLLSRPGSVVGFAAKMRQCDAWLQDLVAHDTDAALYLMFQLA ATSSVGYSASHALVCGTLCHILAHELKLPPAERDSLVRAAMTMNIGMTALQDELANQRERPSATQQKAIDEHPRRSRILL EQLGIGDTLWLEVVGHHHAPLAEGDAGSLSTLPAARRLTRILGTIDRYAAMISPRKSRAGRSATDSVRAIVGHDDERRDE VTYALVRSVGLCPPGTFVRLDNGETALVLRRSEKINSPLVASVIDRQGEQRRQPALHQTATGRPRIQSALARSAVQVELD HRLLVRLGLYAARQYRGIVGLVGAPGAPR
Sequences:
>Translated_349_residues MPFPPPSSSRPAALHAEGPDSEYEDLLGLWSDLESALSVLLSRPGSVVGFAAKMRQCDAWLQDLVAHDTDAALYLMFQLA ATSSVGYSASHALVCGTLCHILAHELKLPPAERDSLVRAAMTMNIGMTALQDELANQRERPSATQQKAIDEHPRRSRILL EQLGIGDTLWLEVVGHHHAPLAEGDAGSLSTLPAARRLTRILGTIDRYAAMISPRKSRAGRSATDSVRAIVGHDDERRDE VTYALVRSVGLCPPGTFVRLDNGETALVLRRSEKINSPLVASVIDRQGEQRRQPALHQTATGRPRIQSALARSAVQVELD HRLLVRLGLYAARQYRGIVGLVGAPGAPR >Mature_348_residues PFPPPSSSRPAALHAEGPDSEYEDLLGLWSDLESALSVLLSRPGSVVGFAAKMRQCDAWLQDLVAHDTDAALYLMFQLAA TSSVGYSASHALVCGTLCHILAHELKLPPAERDSLVRAAMTMNIGMTALQDELANQRERPSATQQKAIDEHPRRSRILLE QLGIGDTLWLEVVGHHHAPLAEGDAGSLSTLPAARRLTRILGTIDRYAAMISPRKSRAGRSATDSVRAIVGHDDERRDEV TYALVRSVGLCPPGTFVRLDNGETALVLRRSEKINSPLVASVIDRQGEQRRQPALHQTATGRPRIQSALARSAVQVELDH RLLVRLGLYAARQYRGIVGLVGAPGAPR
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37889; Mature: 37758
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFPPPSSSRPAALHAEGPDSEYEDLLGLWSDLESALSVLLSRPGSVVGFAAKMRQCDAW CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LQDLVAHDTDAALYLMFQLAATSSVGYSASHALVCGTLCHILAHELKLPPAERDSLVRAA HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH MTMNIGMTALQDELANQRERPSATQQKAIDEHPRRSRILLEQLGIGDTLWLEVVGHHHAP HHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCCC LAEGDAGSLSTLPAARRLTRILGTIDRYAAMISPRKSRAGRSATDSVRAIVGHDDERRDE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHHHHH VTYALVRSVGLCPPGTFVRLDNGETALVLRRSEKINSPLVASVIDRQGEQRRQPALHQTA HHHHHHHHHCCCCCCCEEEECCCCEEEEEECCHHCCCCHHHHHHHHCCHHHHCCHHHHCC TGRPRIQSALARSAVQVELDHRLLVRLGLYAARQYRGIVGLVGAPGAPR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure PFPPPSSSRPAALHAEGPDSEYEDLLGLWSDLESALSVLLSRPGSVVGFAAKMRQCDAW CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LQDLVAHDTDAALYLMFQLAATSSVGYSASHALVCGTLCHILAHELKLPPAERDSLVRAA HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH MTMNIGMTALQDELANQRERPSATQQKAIDEHPRRSRILLEQLGIGDTLWLEVVGHHHAP HHHHCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHCCCCCC LAEGDAGSLSTLPAARRLTRILGTIDRYAAMISPRKSRAGRSATDSVRAIVGHDDERRDE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHHHHH VTYALVRSVGLCPPGTFVRLDNGETALVLRRSEKINSPLVASVIDRQGEQRRQPALHQTA HHHHHHHHHCCCCCCCEEEECCCCEEEEEECCHHCCCCHHHHHHHHCCHHHHCCHHHHCC TGRPRIQSALARSAVQVELDHRLLVRLGLYAARQYRGIVGLVGAPGAPR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA