| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610520
Identifier: 120610520
GI number: 120610520
Start: 1993983
End: 1994963
Strand: Reverse
Name: 120610520
Synonym: Aave_1840
Alternate gene names: NA
Gene position: 1994963-1993983 (Counterclockwise)
Preceding gene: 120610521
Following gene: 120610519
Centisome position: 37.27
GC content: 69.11
Gene sequence:
>981_bases ATGAAGAAACGCACCCTGATGTCCGCAGCCTGCGCCCTGCTGGCGGCCTCTTTCCTGGCGCCCGCGGGCGCTGCGGACGC CTTCCCGGCCAAGCCGATCACCCTGGTGATCCCCTACCCGCCCGGCGGGCCGACCGATGCCATGGCGCGCACCCTGGCCG CGGAGATCAAGGACCGTATCGGCCAGCCCATGATCGTGGAGAACCGCGCCGGGGCCAACGGCAACATCGGCGCCGAATAC GTCGCGCGGGCGGAACCCGACGGCTACACGCTCATGTTCGGCACGTCGGGCCCGCTGGCCATCAATGCCAGCCTCTACGC CAGACTCGGGTACGACCCGGTCAAGAGCTATGCGCCCGTCATCCGGGTGGGCTACCTGCCCAACATCCTGGTGGTGCATC CCAGCGTGCCGGCGCGCAACGTGCAGGAGCTCGTCGCCTACGGCCGCGCCCACCCGGGCAAGCTGGCGTACGCCTCCTCG GGCAGCGGGGCATCGTCGCACCTGGCGGGGGTGCTGTTCAACTCCGTGGCGGGGACCGACTTCCTGCACATCCCCTACAA GGGCACCGGACCCGCGCTCAATGATCTGCTGGGGGGCCAGGTCGCCATGAGCTTCACCGACGTGCTGACTGCCCAGCCCT ATGTGAAAGCCGGCAAATTGCGCGCGCTGGGGGTGACGACCTCGAAGCGCTCGCAGGCCCTGCCCGACGTACCCACGGTG GCCGAGCAGGGCTATCCGGGCTACGACGTCAGCGTGTTCTTCGGCGTGGTGGCTCCCGCGGGTACGCCGGCCGACCGCAT CGCCATCCTCAACAAGGCATTCGCCCAAGCCCTCTCCACCGCCAAGGTCAAGACACTGTTCGCCTCGCAGGGGCTGGAAG CCGCAGCCGATACACGCCCGCAGGCGCTGGGGCGCTTCATCGCCGACGAGACGGCCAAGTGGGCGCAGGTGGTCCACCAG TCGGGAGTCCGCCTTGACTGA
Upstream 100 bases:
>100_bases CTGCCGAATGGCAGGACCGCCGCGGCGCGGCACGGGAGGCCGCCGCAACGGCCTGAGCCATCCGCCCCCACAACCACAAC CACAACGGAGACAAAGCAAG
Downstream 100 bases:
>100_bases TACAGCAGGCACCGGCGCACTCGCCGGCATCCGGGTGCTCGATCTCTCGCGCATCCTCGGCGGGCCGTACTGCGGCCAGA TCCTGGGCGACCACGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKKRTLMSAACALLAASFLAPAGAADAFPAKPITLVIPYPPGGPTDAMARTLAAEIKDRIGQPMIVENRAGANGNIGAEY VARAEPDGYTLMFGTSGPLAINASLYARLGYDPVKSYAPVIRVGYLPNILVVHPSVPARNVQELVAYGRAHPGKLAYASS GSGASSHLAGVLFNSVAGTDFLHIPYKGTGPALNDLLGGQVAMSFTDVLTAQPYVKAGKLRALGVTTSKRSQALPDVPTV AEQGYPGYDVSVFFGVVAPAGTPADRIAILNKAFAQALSTAKVKTLFASQGLEAAADTRPQALGRFIADETAKWAQVVHQ SGVRLD
Sequences:
>Translated_326_residues MKKRTLMSAACALLAASFLAPAGAADAFPAKPITLVIPYPPGGPTDAMARTLAAEIKDRIGQPMIVENRAGANGNIGAEY VARAEPDGYTLMFGTSGPLAINASLYARLGYDPVKSYAPVIRVGYLPNILVVHPSVPARNVQELVAYGRAHPGKLAYASS GSGASSHLAGVLFNSVAGTDFLHIPYKGTGPALNDLLGGQVAMSFTDVLTAQPYVKAGKLRALGVTTSKRSQALPDVPTV AEQGYPGYDVSVFFGVVAPAGTPADRIAILNKAFAQALSTAKVKTLFASQGLEAAADTRPQALGRFIADETAKWAQVVHQ SGVRLD >Mature_326_residues MKKRTLMSAACALLAASFLAPAGAADAFPAKPITLVIPYPPGGPTDAMARTLAAEIKDRIGQPMIVENRAGANGNIGAEY VARAEPDGYTLMFGTSGPLAINASLYARLGYDPVKSYAPVIRVGYLPNILVVHPSVPARNVQELVAYGRAHPGKLAYASS GSGASSHLAGVLFNSVAGTDFLHIPYKGTGPALNDLLGGQVAMSFTDVLTAQPYVKAGKLRALGVTTSKRSQALPDVPTV AEQGYPGYDVSVFFGVVAPAGTPADRIAILNKAFAQALSTAKVKTLFASQGLEAAADTRPQALGRFIADETAKWAQVVHQ SGVRLD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33861; Mature: 33861
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRTLMSAACALLAASFLAPAGAADAFPAKPITLVIPYPPGGPTDAMARTLAAEIKDRI CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC GQPMIVENRAGANGNIGAEYVARAEPDGYTLMFGTSGPLAINASLYARLGYDPVKSYAPV CCCEEEECCCCCCCCCCHHHHEECCCCCEEEEEECCCCEEECHHHHEECCCCHHHHCCCE IRVGYLPNILVVHPSVPARNVQELVAYGRAHPGKLAYASSGSGASSHLAGVLFNSVAGTD EEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC FLHIPYKGTGPALNDLLGGQVAMSFTDVLTAQPYVKAGKLRALGVTTSKRSQALPDVPTV EEEECCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHCCCEEEEECCCCHHHCCCCCCCHH AEQGYPGYDVSVFFGVVAPAGTPADRIAILNKAFAQALSTAKVKTLFASQGLEAAADTRP HHCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCH QALGRFIADETAKWAQVVHQSGVRLD HHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKRTLMSAACALLAASFLAPAGAADAFPAKPITLVIPYPPGGPTDAMARTLAAEIKDRI CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC GQPMIVENRAGANGNIGAEYVARAEPDGYTLMFGTSGPLAINASLYARLGYDPVKSYAPV CCCEEEECCCCCCCCCCHHHHEECCCCCEEEEEECCCCEEECHHHHEECCCCHHHHCCCE IRVGYLPNILVVHPSVPARNVQELVAYGRAHPGKLAYASSGSGASSHLAGVLFNSVAGTD EEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC FLHIPYKGTGPALNDLLGGQVAMSFTDVLTAQPYVKAGKLRALGVTTSKRSQALPDVPTV EEEECCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHCCCEEEEECCCCHHHCCCCCCCHH AEQGYPGYDVSVFFGVVAPAGTPADRIAILNKAFAQALSTAKVKTLFASQGLEAAADTRP HHCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCH QALGRFIADETAKWAQVVHQSGVRLD HHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]