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The map label for this gene is omp85 [H]

Identifier: 120610511

GI number: 120610511

Start: 1985073

End: 1987370

Strand: Direct

Name: omp85 [H]

Synonym: Aave_1831

Alternate gene names: 120610511

Gene position: 1985073-1987370 (Clockwise)

Preceding gene: 120610510

Following gene: 120610512

Centisome position: 37.08

GC content: 65.62

Gene sequence:

>2298_bases
ATGAAAAAACACATCAACCGCCTGGGCGTGCGCACGGCATGCGCCGTCGCCGCCATGGTCTTCGTCGCGCAGGCTGCCTG
GGCCCTTGAACCCTTCAAGGTCCAGGACATCCGGGTGGAAGGGCTGCAGCGCGTGGAGCCGGGCACGGTGTTCGCCTCCA
TGCCGCTGCGCGTGGGCGACGATTACAACGACGAGAAGGGCGCGGCCGCCATCCGCTCGCTCTTCGCGCTGGGGCTGTTC
AAGGACGTGCGCCTGGAGGCCAGCGGCAACGTGCTGGTCGTGGTGGTGGAGGAGCGCCCCACCATCGCCGACGTCGATTT
CGCCGGCACCAAGGAATTCGACAAGGACACCCTCAAGAAGGCCATGCGGGACGTGGGCCTGACCGAAGGACGCCCCTACG
ACAAGGCCCTGACCGACCGTGCGGAGCAGGAGCTCAAGCGCCAGTACATCAACAAGAGCCTGTACGGCGCCGAGGTGGTG
ACCACGGTGACGCCCATCGAGCGCAACCGCGTCAACCTGACCTTCACGGTGACCGAGGGCGAGCCCGCCAAGATCAAGGA
CATCCACATCAACGGCGCGCAGGCCTTCAGCGAATCCACGCTCAAGGGCCTGTTCGACCAGGACACCGGCGGCTGGCTGA
GCTGGTACACCAAGTCCGACCGCTATTCCCGCACCAAGCTCAACGCCGACCTGGAGACGCTGCGCTCCTACTACCTCGCG
CGCGGCTACCTCGAGTTCCGCATCGACTCCACCCAGGTGGCGGTGTCGCCGGACAAGCAGGACATCAGCATCACGATCAA
TATCACCGAAGGCCAGCGCTACGTGGTCTCCGGCGTGAAGCTGGAGGGCAACTACCTGGACCGCGACGACGAGTTCAAGT
CGCTCATCACCATCCAGCCCGGCGAGCCCTACAACGCCGACCGTGTCACCGAGACCACCAAGGCATTCACCGACCACTTC
GGCAACTTCGGCTTCGCCTTCGCCCGCGTGGAGGCCGTGCCCGAGATCGACCGCGAGAACAACCGCGTGGCCCTCGTGCT
GCGCGCCGAGCCCTCGCGCCGGGCCTACGTGCGCCGCATCATCGTGAGCGGCAACAACCGCACCCGCGACGAAGTGATCC
GCCGCGAATTCCGGCAGTACGAGGCCTCCTGGTACGACGGCGACAAGATCAAGCTCTCGCGCGACCGCGTGGACCGCCTG
GGCTACTTCACGGAGGTGAACGTCGAGACCCAGGATGTCTCGGGCTCGCCCGACCAGGTGGACCTCGTGGTGAACGTGGC
CGAGAAGCCCACCGGCTCCCTGCAGCTGGGCGCGGGCTTCTCCAGCGCCGAGAAGGTGTCGCTGTCGTTCAGCATCAAGC
AGGAGAACGTGTTCGGCTCGGGCAACTACCTGGGCGTGGACGTGAACACCAGCAAGTACCGCCGCACGCTGGTGCTCAGC
ACGACCAACCCGTACTTCACTCCCGACGGCATCTCCCGCACGCTGGACCTGTACTACCGCACCGACAAGCCCTACGAGGA
CCAGGGCGGCAACTACCAGCTGGTCACCGCGGGCACCAGCGTGCGCTTCGGCATCCCGTTCAGCGAGACGGACACGGTGT
TCTTCGGCGGTGGCCTGGAGAACACGCGCATCAAGCTGGGCACGAACATCCCTGCAGCCTATCTGGCGTACGCCAACACC
TACGGCAGCAGCAGCACCGCGATCCCGCTCACCGTGGGCTGGTCGCGCGACGACCGCGACAGCGCGCTGGCGCCGAATTC
GGGCCGCTATCAGCGCCTGAACTCCGACTGGTCGGTGGCGGGCGATGCGCGCTACGTGCGGGCGAACTACCAGTTCCAGC
AGTACGTGCCGCTGAACAAGAAGTTCACCCTGGCGTTCAACTCCGAACTGGGCTGGGGCAAGGGCCTGAACGGCCGTCCC
TACCCGGTGTTCAAGAACTTCTACTCCGGCGGCCTCGGCTCGGTGCGCGGCTTCGACCAGGGCACGCTGGGTCCGCGCGA
CGTCACCGGCGCCTCCCTGGGCGGCCCGAAGAAGGTCACGCTCAATGCGGAATTCATCGCGCCGTTCCCCGGCGCAGGCA
ACGACCGTACGCTGCGCGTGTTCACGTTCGTGGACGCCGGCAACGTTTTCGGCGAAGACGAGAAGGTCTCCTTCAGCGAC
ATGCGTGTCTCTGCGGGCCTGGGCCTGAGCTGGATTTCACCGCTCGGTCCGCTTCGCCTCGCTTTCGCGCAACCGGTGCG
CAAGTTCGCCGGCGATAGAATCCAGAAACTGCAATTCCAGATCGGAACGTCTTTCTAA

Upstream 100 bases:

>100_bases
CTCCTCGTGATGATGTCCATCGCCCTTTTCAACGACGTCACCCGGCTTTTTGGCTAAACCTACCGCCGCATGAATCCGCC
ATGTCGGCACCAGTTCACTC

Downstream 100 bases:

>100_bases
TGAAATCCCTTTCCCGCCATATTCCCCTGGTCCTTCTGCTCGGCGCGCTCGGCGCGGCCGTGCCCGCGCAGGCACAGGAG
TTCAAGGCCGGCTTCGTGAA

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 765; Mature: 765

Protein sequence:

>765_residues
MKKHINRLGVRTACAVAAMVFVAQAAWALEPFKVQDIRVEGLQRVEPGTVFASMPLRVGDDYNDEKGAAAIRSLFALGLF
KDVRLEASGNVLVVVVEERPTIADVDFAGTKEFDKDTLKKAMRDVGLTEGRPYDKALTDRAEQELKRQYINKSLYGAEVV
TTVTPIERNRVNLTFTVTEGEPAKIKDIHINGAQAFSESTLKGLFDQDTGGWLSWYTKSDRYSRTKLNADLETLRSYYLA
RGYLEFRIDSTQVAVSPDKQDISITINITEGQRYVVSGVKLEGNYLDRDDEFKSLITIQPGEPYNADRVTETTKAFTDHF
GNFGFAFARVEAVPEIDRENNRVALVLRAEPSRRAYVRRIIVSGNNRTRDEVIRREFRQYEASWYDGDKIKLSRDRVDRL
GYFTEVNVETQDVSGSPDQVDLVVNVAEKPTGSLQLGAGFSSAEKVSLSFSIKQENVFGSGNYLGVDVNTSKYRRTLVLS
TTNPYFTPDGISRTLDLYYRTDKPYEDQGGNYQLVTAGTSVRFGIPFSETDTVFFGGGLENTRIKLGTNIPAAYLAYANT
YGSSSTAIPLTVGWSRDDRDSALAPNSGRYQRLNSDWSVAGDARYVRANYQFQQYVPLNKKFTLAFNSELGWGKGLNGRP
YPVFKNFYSGGLGSVRGFDQGTLGPRDVTGASLGGPKKVTLNAEFIAPFPGAGNDRTLRVFTFVDAGNVFGEDEKVSFSD
MRVSAGLGLSWISPLGPLRLAFAQPVRKFAGDRIQKLQFQIGTSF

Sequences:

>Translated_765_residues
MKKHINRLGVRTACAVAAMVFVAQAAWALEPFKVQDIRVEGLQRVEPGTVFASMPLRVGDDYNDEKGAAAIRSLFALGLF
KDVRLEASGNVLVVVVEERPTIADVDFAGTKEFDKDTLKKAMRDVGLTEGRPYDKALTDRAEQELKRQYINKSLYGAEVV
TTVTPIERNRVNLTFTVTEGEPAKIKDIHINGAQAFSESTLKGLFDQDTGGWLSWYTKSDRYSRTKLNADLETLRSYYLA
RGYLEFRIDSTQVAVSPDKQDISITINITEGQRYVVSGVKLEGNYLDRDDEFKSLITIQPGEPYNADRVTETTKAFTDHF
GNFGFAFARVEAVPEIDRENNRVALVLRAEPSRRAYVRRIIVSGNNRTRDEVIRREFRQYEASWYDGDKIKLSRDRVDRL
GYFTEVNVETQDVSGSPDQVDLVVNVAEKPTGSLQLGAGFSSAEKVSLSFSIKQENVFGSGNYLGVDVNTSKYRRTLVLS
TTNPYFTPDGISRTLDLYYRTDKPYEDQGGNYQLVTAGTSVRFGIPFSETDTVFFGGGLENTRIKLGTNIPAAYLAYANT
YGSSSTAIPLTVGWSRDDRDSALAPNSGRYQRLNSDWSVAGDARYVRANYQFQQYVPLNKKFTLAFNSELGWGKGLNGRP
YPVFKNFYSGGLGSVRGFDQGTLGPRDVTGASLGGPKKVTLNAEFIAPFPGAGNDRTLRVFTFVDAGNVFGEDEKVSFSD
MRVSAGLGLSWISPLGPLRLAFAQPVRKFAGDRIQKLQFQIGTSF
>Mature_765_residues
MKKHINRLGVRTACAVAAMVFVAQAAWALEPFKVQDIRVEGLQRVEPGTVFASMPLRVGDDYNDEKGAAAIRSLFALGLF
KDVRLEASGNVLVVVVEERPTIADVDFAGTKEFDKDTLKKAMRDVGLTEGRPYDKALTDRAEQELKRQYINKSLYGAEVV
TTVTPIERNRVNLTFTVTEGEPAKIKDIHINGAQAFSESTLKGLFDQDTGGWLSWYTKSDRYSRTKLNADLETLRSYYLA
RGYLEFRIDSTQVAVSPDKQDISITINITEGQRYVVSGVKLEGNYLDRDDEFKSLITIQPGEPYNADRVTETTKAFTDHF
GNFGFAFARVEAVPEIDRENNRVALVLRAEPSRRAYVRRIIVSGNNRTRDEVIRREFRQYEASWYDGDKIKLSRDRVDRL
GYFTEVNVETQDVSGSPDQVDLVVNVAEKPTGSLQLGAGFSSAEKVSLSFSIKQENVFGSGNYLGVDVNTSKYRRTLVLS
TTNPYFTPDGISRTLDLYYRTDKPYEDQGGNYQLVTAGTSVRFGIPFSETDTVFFGGGLENTRIKLGTNIPAAYLAYANT
YGSSSTAIPLTVGWSRDDRDSALAPNSGRYQRLNSDWSVAGDARYVRANYQFQQYVPLNKKFTLAFNSELGWGKGLNGRP
YPVFKNFYSGGLGSVRGFDQGTLGPRDVTGASLGGPKKVTLNAEFIAPFPGAGNDRTLRVFTFVDAGNVFGEDEKVSFSD
MRVSAGLGLSWISPLGPLRLAFAQPVRKFAGDRIQKLQFQIGTSF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=805, Percent_Identity=35.4037267080745, Blast_Score=477, Evalue=1e-135,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 85027; Mature: 85027

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHINRLGVRTACAVAAMVFVAQAAWALEPFKVQDIRVEGLQRVEPGTVFASMPLRVGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEECCEEECC
DYNDEKGAAAIRSLFALGLFKDVRLEASGNVLVVVVEERPTIADVDFAGTKEFDKDTLKK
CCCCCHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCEEECCCCCCCCCCHHHHHH
AMRDVGLTEGRPYDKALTDRAEQELKRQYINKSLYGAEVVTTVTPIERNRVNLTFTVTEG
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECC
EPAKIKDIHINGAQAFSESTLKGLFDQDTGGWLSWYTKSDRYSRTKLNADLETLRSYYLA
CCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHH
RGYLEFRIDSTQVAVSPDKQDISITINITEGQRYVVSGVKLEGNYLDRDDEFKSLITIQP
CCEEEEEECCEEEEECCCCCCEEEEEEEECCCEEEEEEEEEECCCCCCCCCCCEEEEECC
GEPYNADRVTETTKAFTDHFGNFGFAFARVEAVPEIDRENNRVALVLRAEPSRRAYVRRI
CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEE
IVSGNNRTRDEVIRREFRQYEASWYDGDKIKLSRDRVDRLGYFTEVNVETQDVSGSPDQV
EECCCCCCHHHHHHHHHHHHCCCEECCCEEEECHHHHHHCCCEEEECEEEECCCCCCCEE
DLVVNVAEKPTGSLQLGAGFSSAEKVSLSFSIKQENVFGSGNYLGVDVNTSKYRRTLVLS
EEEEEECCCCCCCEEECCCCCCCCEEEEEEEEEECCEECCCCEEEEECCCHHEEEEEEEE
TTNPYFTPDGISRTLDLYYRTDKPYEDQGGNYQLVTAGTSVRFGIPFSETDTVFFGGGLE
CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCCCCEEEECCCCC
NTRIKLGTNIPAAYLAYANTYGSSSTAIPLTVGWSRDDRDSALAPNSGRYQRLNSDWSVA
CCEEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC
GDARYVRANYQFQQYVPLNKKFTLAFNSELGWGKGLNGRPYPVFKNFYSGGLGSVRGFDQ
CCCEEEEECCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
GTLGPRDVTGASLGGPKKVTLNAEFIAPFPGAGNDRTLRVFTFVDAGNVFGEDEKVSFSD
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEHHH
MRVSAGLGLSWISPLGPLRLAFAQPVRKFAGDRIQKLQFQIGTSF
EEEECCCCCHHHCCCCHHHHHHHHHHHHHHCCHHEEEEEEECCCC
>Mature Secondary Structure
MKKHINRLGVRTACAVAAMVFVAQAAWALEPFKVQDIRVEGLQRVEPGTVFASMPLRVGD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEECCEEECC
DYNDEKGAAAIRSLFALGLFKDVRLEASGNVLVVVVEERPTIADVDFAGTKEFDKDTLKK
CCCCCHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCCCEEECCCCCCCCCCHHHHHH
AMRDVGLTEGRPYDKALTDRAEQELKRQYINKSLYGAEVVTTVTPIERNRVNLTFTVTEG
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECC
EPAKIKDIHINGAQAFSESTLKGLFDQDTGGWLSWYTKSDRYSRTKLNADLETLRSYYLA
CCCEEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHH
RGYLEFRIDSTQVAVSPDKQDISITINITEGQRYVVSGVKLEGNYLDRDDEFKSLITIQP
CCEEEEEECCEEEEECCCCCCEEEEEEEECCCEEEEEEEEEECCCCCCCCCCCEEEEECC
GEPYNADRVTETTKAFTDHFGNFGFAFARVEAVPEIDRENNRVALVLRAEPSRRAYVRRI
CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEE
IVSGNNRTRDEVIRREFRQYEASWYDGDKIKLSRDRVDRLGYFTEVNVETQDVSGSPDQV
EECCCCCCHHHHHHHHHHHHCCCEECCCEEEECHHHHHHCCCEEEECEEEECCCCCCCEE
DLVVNVAEKPTGSLQLGAGFSSAEKVSLSFSIKQENVFGSGNYLGVDVNTSKYRRTLVLS
EEEEEECCCCCCCEEECCCCCCCCEEEEEEEEEECCEECCCCEEEEECCCHHEEEEEEEE
TTNPYFTPDGISRTLDLYYRTDKPYEDQGGNYQLVTAGTSVRFGIPFSETDTVFFGGGLE
CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCCCCEEEECCCCC
NTRIKLGTNIPAAYLAYANTYGSSSTAIPLTVGWSRDDRDSALAPNSGRYQRLNSDWSVA
CCEEEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC
GDARYVRANYQFQQYVPLNKKFTLAFNSELGWGKGLNGRPYPVFKNFYSGGLGSVRGFDQ
CCCEEEEECCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
GTLGPRDVTGASLGGPKKVTLNAEFIAPFPGAGNDRTLRVFTFVDAGNVFGEDEKVSFSD
CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEHHH
MRVSAGLGLSWISPLGPLRLAFAQPVRKFAGDRIQKLQFQIGTSF
EEEECCCCCHHHCCCCHHHHHHHHHHHHHHCCHHEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]