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The map label for this gene is skp [H]

Identifier: 120610512

GI number: 120610512

Start: 1987370

End: 1987897

Strand: Direct

Name: skp [H]

Synonym: Aave_1832

Alternate gene names: 120610512

Gene position: 1987370-1987897 (Clockwise)

Preceding gene: 120610511

Following gene: 120610513

Centisome position: 37.13

GC content: 66.67

Gene sequence:

>528_bases
ATGAAATCCCTTTCCCGCCATATTCCCCTGGTCCTTCTGCTCGGCGCGCTCGGCGCGGCCGTGCCCGCGCAGGCACAGGA
GTTCAAGGCCGGCTTCGTGAACACCGACCGCATCTTCCGCGAAGCCAGCACGGCCAAGGCCGCGCAGGCCAAGCTGGAGC
AGGAATTCTCCAAGCGCGAGAAGGACCTGGTTGACCAGGGCAACGCGCTCAAGGCCGCCACCGACAAGTTCGAGCGCGAG
GCCCCCACCATGGCCGAGAGCCAGCGCACCGCCCGCCAGCGGCAGCTGGCGGACCAGGACCGCGACTTCCAGCGCAAGCG
CCGCGAGTTCCAGGACGACCTGGCCGCCCGCAAGAACGAGGAACTGGGCCAGGTGCTCGAGCGTGCCAACAAGGCCGTCA
AGCAGGTGGCCGAGGCCGAGAAGTACGACGTCATCCTGCAGGAAGCCGTCTACATCAACCCGAAGCACGACATCACCGAC
AAGGTGATCAAGGCGCTGAATGCGGGCGCTGGCGCCGGTGCGAAGTGA

Upstream 100 bases:

>100_bases
CACCGCTCGGTCCGCTTCGCCTCGCTTTCGCGCAACCGGTGCGCAAGTTCGCCGGCGATAGAATCCAGAAACTGCAATTC
CAGATCGGAACGTCTTTCTA

Downstream 100 bases:

>100_bases
TCGCAGCGGCTGCGGGGCGGCGCGCACGGGGCATCCTGCGTGAGCGTGCGTCTCAGGCAGATTGTTGAGGCGCTGGGCGG
AACGATCGAAGGAGGCGGCG

Product: outer membrane chaperone Skp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKSLSRHIPLVLLLGALGAAVPAQAQEFKAGFVNTDRIFREASTAKAAQAKLEQEFSKREKDLVDQGNALKAATDKFERE
APTMAESQRTARQRQLADQDRDFQRKRREFQDDLAARKNEELGQVLERANKAVKQVAEAEKYDVILQEAVYINPKHDITD
KVIKALNAGAGAGAK

Sequences:

>Translated_175_residues
MKSLSRHIPLVLLLGALGAAVPAQAQEFKAGFVNTDRIFREASTAKAAQAKLEQEFSKREKDLVDQGNALKAATDKFERE
APTMAESQRTARQRQLADQDRDFQRKRREFQDDLAARKNEELGQVLERANKAVKQVAEAEKYDVILQEAVYINPKHDITD
KVIKALNAGAGAGAK
>Mature_175_residues
MKSLSRHIPLVLLLGALGAAVPAQAQEFKAGFVNTDRIFREASTAKAAQAKLEQEFSKREKDLVDQGNALKAATDKFERE
APTMAESQRTARQRQLADQDRDFQRKRREFQDDLAARKNEELGQVLERANKAVKQVAEAEKYDVILQEAVYINPKHDITD
KVIKALNAGAGAGAK

Specific function: Molecular chaperone that interacts specifically with outer membrane proteins, thus maintaining the solubility of early folding intermediates during passage through the periplasm [H]

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

None

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 19460; Mature: 19460

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLSRHIPLVLLLGALGAAVPAQAQEFKAGFVNTDRIFREASTAKAAQAKLEQEFSKRE
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KDLVDQGNALKAATDKFEREAPTMAESQRTARQRQLADQDRDFQRKRREFQDDLAARKNE
HHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCH
ELGQVLERANKAVKQVAEAEKYDVILQEAVYINPKHDITDKVIKALNAGAGAGAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKSLSRHIPLVLLLGALGAAVPAQAQEFKAGFVNTDRIFREASTAKAAQAKLEQEFSKRE
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KDLVDQGNALKAATDKFEREAPTMAESQRTARQRQLADQDRDFQRKRREFQDDLAARKNE
HHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCH
ELGQVLERANKAVKQVAEAEKYDVILQEAVYINPKHDITDKVIKALNAGAGAGAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]