| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610485
Identifier: 120610485
GI number: 120610485
Start: 1958502
End: 1959554
Strand: Reverse
Name: 120610485
Synonym: Aave_1804
Alternate gene names: NA
Gene position: 1959554-1958502 (Counterclockwise)
Preceding gene: 120610486
Following gene: 120610484
Centisome position: 36.61
GC content: 74.64
Gene sequence:
>1053_bases ATGTCTAACCGCCCCATCTCCCCCGGCTCCATCACCCAGGTAGCAGGCATCGAAGTCGGCCACTTCACCTCCCCCCTCCG CCCCACCGGCTGCACCGTCGTCATCGCCCGCGAAGGCGCCGTGGCAGGCGTGGATGTGCGCGGCGCGGCCCCCGGCACGC GCGAAACCGATCTGCTGGAGCCCACGCACCTGGTCGACCGCATCCATGCCGTGATGCTGGCCGGCGGCAGCGCGTTCGGG CTGGATGCGGCGGCGGGCGCGGTGCGGTGGCTGGAGGAGCGCGGTATCGGGTTCGACGTGGGGGTGGCGCGGGTGCCGCT GGTGCCGGCGGCGGTGCTGTTCGATCTGCACGTGGGCGATGCGCGCATCCGGCCCGATGTGGCGGCGGGCTATGCGGCGT GCGAGGCGGCTGCCGCTGCAGCTTCTTCGGGTGCGGCGGCCATGCCGCTGGCCGAGGGCTGCGTGGGCGCGGGCGCCGGA GCAGCCGTGGGCAAGCTGTTCGGCATGGCGCATGCGATGAAGGGCGGCATCGGCAGCGCATCGGTCACCGTGGATGGCGT GACGGTGGGCGCGCTGGTGGCCTGCAATGCGGTGGGCGACGTGGTGGACCCGGAGACGGGCCGCCCGGTGGCCGGCGCTC GCACGGCCGATGGCCTGCACCTGCGCGATACGCGCCGCGCGCTGCTGGCGGGCGATGCGCCGCGCACGCTGCTTGCGGGC ACCAACACCACGATCGGCGTGGTGGCGACCGATGCGGTGATCACCAAGGCGCAGGCGCGCCGGCTGGCGGTGTGCGCGCA CGACGGGCTGGCGCGGGCGATCAATCCGGTGCACACGCTGTCGGATGGCGACACGCTGTTCGCGCTGGGCACCGGACGGG CGGGCAAGCCGCTCGGGATGATGTTGCTCTCCACCATGGCGGCCGAGGCGACGGCGCGCGCCACGCTGCGCTCGGTGCTG GCGGCGCGCTCGCTGACCACGGCCGAGGGGCTGCACCTGCCCTGCGCGGCCGACGTCGCCGGCACGGCGCCCTGGGGAGC GGGCTGGCCATGA
Upstream 100 bases:
>100_bases CAGGTGCCATCCACCACTGAGTCGCGTCGTTTTCAGGCCTGACAGGCTTACGCTATGGTTGCGCCCTCAGCCGCTTCCCT ACATCACCCCAGCGCCTCAC
Downstream 100 bases:
>100_bases ACGTCATGCTTGCCGCGCGGTCGCGCACCGCGGCCCGGCGCGTGCGCACGGCGCTGCTGAACGTGCGCGACCTGCTGCTG TCGGCCGGGCCGCTGGCCTT
Product: peptidase S58, DmpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSNRPISPGSITQVAGIEVGHFTSPLRPTGCTVVIAREGAVAGVDVRGAAPGTRETDLLEPTHLVDRIHAVMLAGGSAFG LDAAAGAVRWLEERGIGFDVGVARVPLVPAAVLFDLHVGDARIRPDVAAGYAACEAAAAAASSGAAAMPLAEGCVGAGAG AAVGKLFGMAHAMKGGIGSASVTVDGVTVGALVACNAVGDVVDPETGRPVAGARTADGLHLRDTRRALLAGDAPRTLLAG TNTTIGVVATDAVITKAQARRLAVCAHDGLARAINPVHTLSDGDTLFALGTGRAGKPLGMMLLSTMAAEATARATLRSVL AARSLTTAEGLHLPCAADVAGTAPWGAGWP
Sequences:
>Translated_350_residues MSNRPISPGSITQVAGIEVGHFTSPLRPTGCTVVIAREGAVAGVDVRGAAPGTRETDLLEPTHLVDRIHAVMLAGGSAFG LDAAAGAVRWLEERGIGFDVGVARVPLVPAAVLFDLHVGDARIRPDVAAGYAACEAAAAAASSGAAAMPLAEGCVGAGAG AAVGKLFGMAHAMKGGIGSASVTVDGVTVGALVACNAVGDVVDPETGRPVAGARTADGLHLRDTRRALLAGDAPRTLLAG TNTTIGVVATDAVITKAQARRLAVCAHDGLARAINPVHTLSDGDTLFALGTGRAGKPLGMMLLSTMAAEATARATLRSVL AARSLTTAEGLHLPCAADVAGTAPWGAGWP >Mature_349_residues SNRPISPGSITQVAGIEVGHFTSPLRPTGCTVVIAREGAVAGVDVRGAAPGTRETDLLEPTHLVDRIHAVMLAGGSAFGL DAAAGAVRWLEERGIGFDVGVARVPLVPAAVLFDLHVGDARIRPDVAAGYAACEAAAAAASSGAAAMPLAEGCVGAGAGA AVGKLFGMAHAMKGGIGSASVTVDGVTVGALVACNAVGDVVDPETGRPVAGARTADGLHLRDTRRALLAGDAPRTLLAGT NTTIGVVATDAVITKAQARRLAVCAHDGLARAINPVHTLSDGDTLFALGTGRAGKPLGMMLLSTMAAEATARATLRSVLA ARSLTTAEGLHLPCAADVAGTAPWGAGWP
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1333 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016117 - InterPro: IPR005321 [H]
Pfam domain/function: PF03576 Peptidase_S58 [H]
EC number: NA
Molecular weight: Translated: 34723; Mature: 34592
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRPISPGSITQVAGIEVGHFTSPLRPTGCTVVIAREGAVAGVDVRGAAPGTRETDLLE CCCCCCCCCCCEEEECEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC PTHLVDRIHAVMLAGGSAFGLDAAAGAVRWLEERGIGFDVGVARVPLVPAAVLFDLHVGD HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCEECCHHHCCCCCEEEEEEEECCC ARIRPDVAAGYAACEAAAAAASSGAAAMPLAEGCVGAGAGAAVGKLFGMAHAMKGGIGSA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC SVTVDGVTVGALVACNAVGDVVDPETGRPVAGARTADGLHLRDTRRALLAGDAPRTLLAG EEEECCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEC TNTTIGVVATDAVITKAQARRLAVCAHDGLARAINPVHTLSDGDTLFALGTGRAGKPLGM CCCEEEEEECHHHHHHHHHHEEEEECCCCHHHHCCCHHCCCCCCEEEEEECCCCCCHHHH MLLSTMAAEATARATLRSVLAARSLTTAEGLHLPCAADVAGTAPWGAGWP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SNRPISPGSITQVAGIEVGHFTSPLRPTGCTVVIAREGAVAGVDVRGAAPGTRETDLLE CCCCCCCCCCEEEECEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC PTHLVDRIHAVMLAGGSAFGLDAAAGAVRWLEERGIGFDVGVARVPLVPAAVLFDLHVGD HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCEECCHHHCCCCCEEEEEEEECCC ARIRPDVAAGYAACEAAAAAASSGAAAMPLAEGCVGAGAGAAVGKLFGMAHAMKGGIGSA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC SVTVDGVTVGALVACNAVGDVVDPETGRPVAGARTADGLHLRDTRRALLAGDAPRTLLAG EEEECCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEC TNTTIGVVATDAVITKAQARRLAVCAHDGLARAINPVHTLSDGDTLFALGTGRAGKPLGM CCCEEEEEECHHHHHHHHHHEEEEECCCCHHHHCCCHHCCCCCCEEEEEECCCCCCHHHH MLLSTMAAEATARATLRSVLAARSLTTAEGLHLPCAADVAGTAPWGAGWP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]