| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610486
Identifier: 120610486
GI number: 120610486
Start: 1959859
End: 1960533
Strand: Reverse
Name: 120610486
Synonym: Aave_1805
Alternate gene names: NA
Gene position: 1960533-1959859 (Counterclockwise)
Preceding gene: 120610487
Following gene: 120610485
Centisome position: 36.63
GC content: 64.89
Gene sequence:
>675_bases GTGGTGAGCGATGTAACCAAGGAGCGCGACATGGATAAGTTCACTCTCCCCGGCAAAGCAGTGGTCTACGTCATGGATGC CTACTGCGGCTGGTGCTGGGGCTTCTCGGAGCGCATGGGCGAATTCGAAGCCGCGAACCGGCACCGGGTGGCGTTCACCG CCATCAGCGGCGGGCTTTTCGTGGGTGAGCGGGCCGCCGCCATCGCCGACTATCCGCACATTCCTGAAGCCAACGAGCGG ATTGCTCGTTTGACTGGCGCGGTGTTCGGTGAAAGCTACAAGGCGATGCTCACGCAAGGCGACGTGGTGATGGACTCGCT CGATGCCGGTGCCGCCCTGGCCGCCCTCCGCGCGCAGGCGCCTGAGCGGGCCGTTCATTGGGCGCATGAGTTGCAGGCCG CCTTCTACGGCCGTGGCGAGAGCCTGTCAGAGCCCGCTATCGTCTCCGCCATCGCGAAGGCCAACGGGCTGAACGACGAG TTGGTGCTGCGCCAGCTCGCCGATGGGTCGGCCAAGGCGCAGGCGCGGGCGGACTTCGACCTCGCGCACAACGTGTTGGG AGCGCACTCGTATCCCACGCTGCTGTTCGTCAACAAGAACGAGGTCCACAAGCTGCCGGCCACCGGCACAACGTTGTCCA CGCTCAATCAAAAGCTCGATGCCCTGCTGGGCTGA
Upstream 100 bases:
>100_bases ACAGCGCCGAGCTGATCGGCGCCATGAAGGCCGCATACCCCACAGCAGGCTTGGGCATCGCCCTGGACATCGGCGCCAGG GTCGGCAAGGGCGAGATGAA
Downstream 100 bases:
>100_bases CCGAGTGACGAAGAAGCGCCCCGGGCCGGCGATCCGAAGACGGCCGAGCTGCTTGGCCAGCGCGTGGTCGAGATTGCGCG GTCGCGAGCTGCTCGTTGAA
Product: thioredoxin
Products: NA
Alternate protein names: Protein-Disulfide Isomerase; DsbA FrnE Like Protein
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MVSDVTKERDMDKFTLPGKAVVYVMDAYCGWCWGFSERMGEFEAANRHRVAFTAISGGLFVGERAAAIADYPHIPEANER IARLTGAVFGESYKAMLTQGDVVMDSLDAGAALAALRAQAPERAVHWAHELQAAFYGRGESLSEPAIVSAIAKANGLNDE LVLRQLADGSAKAQARADFDLAHNVLGAHSYPTLLFVNKNEVHKLPATGTTLSTLNQKLDALLG
Sequences:
>Translated_224_residues MVSDVTKERDMDKFTLPGKAVVYVMDAYCGWCWGFSERMGEFEAANRHRVAFTAISGGLFVGERAAAIADYPHIPEANER IARLTGAVFGESYKAMLTQGDVVMDSLDAGAALAALRAQAPERAVHWAHELQAAFYGRGESLSEPAIVSAIAKANGLNDE LVLRQLADGSAKAQARADFDLAHNVLGAHSYPTLLFVNKNEVHKLPATGTTLSTLNQKLDALLG >Mature_224_residues MVSDVTKERDMDKFTLPGKAVVYVMDAYCGWCWGFSERMGEFEAANRHRVAFTAISGGLFVGERAAAIADYPHIPEANER IARLTGAVFGESYKAMLTQGDVVMDSLDAGAALAALRAQAPERAVHWAHELQAAFYGRGESLSEPAIVSAIAKANGLNDE LVLRQLADGSAKAQARADFDLAHNVLGAHSYPTLLFVNKNEVHKLPATGTTLSTLNQKLDALLG
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24092; Mature: 24092
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSDVTKERDMDKFTLPGKAVVYVMDAYCGWCWGFSERMGEFEAANRHRVAFTAISGGLF CCCCCCHHCCCCCEECCCCEEEEEHHHHHHHHHCHHHHHCHHHCCCCCEEEEEEECCCEE VGERAAAIADYPHIPEANERIARLTGAVFGESYKAMLTQGDVVMDSLDAGAALAALRAQA ECCHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCHHHHHHHHHCC PERAVHWAHELQAAFYGRGESLSEPAIVSAIAKANGLNDELVLRQLADGSAKAQARADFD HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHH LAHNVLGAHSYPTLLFVNKNEVHKLPATGTTLSTLNQKLDALLG HHHHHHCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MVSDVTKERDMDKFTLPGKAVVYVMDAYCGWCWGFSERMGEFEAANRHRVAFTAISGGLF CCCCCCHHCCCCCEECCCCEEEEEHHHHHHHHHCHHHHHCHHHCCCCCEEEEEEECCCEE VGERAAAIADYPHIPEANERIARLTGAVFGESYKAMLTQGDVVMDSLDAGAALAALRAQA ECCHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCHHHHHHHHHCC PERAVHWAHELQAAFYGRGESLSEPAIVSAIAKANGLNDELVLRQLADGSAKAQARADFD HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHH LAHNVLGAHSYPTLLFVNKNEVHKLPATGTTLSTLNQKLDALLG HHHHHHCCCCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA