| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is rhlE [H]
Identifier: 120610479
GI number: 120610479
Start: 1949484
End: 1951283
Strand: Reverse
Name: rhlE [H]
Synonym: Aave_1798
Alternate gene names: 120610479
Gene position: 1951283-1949484 (Counterclockwise)
Preceding gene: 120610480
Following gene: 120610478
Centisome position: 36.45
GC content: 71.83
Gene sequence:
>1800_bases ATGACTTTTGACGAACTGAATCTGGCCCCGGCCATTCTGAAAGCCGTGCACGAGCAGGGCTACGAAACCCCCACCCCCAT CCAGGCCCAGGCCATCCCCGCCGTGCTCGCCGGGCATGACCTCCTCGCCGGAGCGCAGACCGGTACCGGCAAGACGGCCG CCTTCACGCTGCCGATGCTGCACCGCCTCACGCAGGGCGGCACCGCCCGGCCCGCCGGCGGCATCCGCGCCCTGGTGCTC ACCCCCACGCGCGAGCTGGCCGCGCAGGTCGAGGAAAACCTCCGCGCCTACGCCAAGCACCTGGACGTGAAGTCCACCGT CATCTTCGGCGGCGTGGGCATGAACCCGCAGATCGACCGCATCAAGCGCGGCGTGGACATCCTGGTGGCCACCCCCGGCC GTCTGCTGGATCTGCAGCAGCAGGGCTTCCTGGACCTCTCCAGGGTCGAGATCCTGGTGCTGGACGAAGCCGACCGCATG CTGGACATGGGCTTCATCCACGACGTGAAGAAGGTGCTGGCCCTGGTGCCCCGCGACAAGCAGAGCCTGCTGTTCTCGGC CACCTTCAGCGACGAGATCCGCGAGCTGGCCGGCACCCTGCTCAAGAACCCGCAGAGCATCCAGGTCACGCCGCGCAACA CCACCGTGCAGCGCATCACCCAGGTGATCCACCCCGTGGGCCGCGGCAAGAAGAAGCAGGTGCTGCTGCACATCATCCAG CAGCACAACTGGAGCCAGGTGCTGGTCTTCACCCGCACCAAGTTCGGCGCCAACAACGTGGCCGAATTCCTCACCAAGAA CGGCGTCACGGCCATGGCGCTGCACGGCAACAAGAGCCAGAGCGCCCGCACCCAGGCCCTGGCCGGCTTCAAAAGCGGCG ACATCCGCGCCCTCGTGGCCACCGACATCGCCGCGCGCGGCATCGACATCGACGAGCTGCCGCACGTCGTCAACTACGAG ATCCCCAACGTGCCCGAGGACTACGTCCACCGCATCGGCCGCACCGGCCGCGCGGGCGCCAGCGGCGAGGCCGTGAGCCT GGTCTGCATGGACGAGGAAGGCTTCATGATGGAGATCGAGCGCTTCACCAAGCAGGAGATCCCGGTGCAGGTGCTCGAAG GCTTCGGCCCCGAGGAAGGCGAGAAGGCCGAGCCGATCGCCATGGGCCGCCAGACCATCTGGGGCGGCGCGGGCAAGCCG CCGAGCCGCGAGGTCATGCAGGCGGCCGCCAAGGCTGCGCGCAGCGAGATGATGGAACGCATCCGCACCAACAAGGCAGC CCAGGGTGAGCGCAGCGGCGGCGGCGGAGGCAAGTCCGGCGGGCGCGGCGCGCAGGCCGGCCAGGGCGAAGGCGGCGGCA ACGGCGGCCAGAAGCCCCAGCGCGGCCGCGGCGGCGCGCAAGGCCAGGGCCAGGGCAACGGCCCGCGCGCGGCGCATCCC GGCAACGGCGGCCATCCGCGCTCCGGCAACGGTGGCGGCGGCAATGGCGGCGGGCGTGGCAACCGTCCCCCGCGCAGCGA GGGCGGCCACCGCTCCGACGACCTGCAGCCGCGGCGCGAGAACGCCCACCTGGGCACGCAGCTCGGCACCCACCTGGGCC CCACGCGCCATGGCAGCGGCGGCGGCCAGCCCGACCCGATGCGCACCAGCGTGGACAGCATGTCCAGCGGCCGGCGCGGC GGCGGCGGCTTCCGCAGCGGTGGCGGGGGTGGCGGCTACGGCGGTGGTGGTGGCGGCTACGGCGGCGGCCGCGGCGGCAA CCGCGGTCCCCGTGGCGGCGGTGGCGGCTACGGGCGCTGA
Upstream 100 bases:
>100_bases CCCATTCGTGAATCCCATCTGCCTTGACTGGACGCAGCCCCTTCCCCCGGGTCCTGCGACAGGCCGATGCCTCCCGCGCC CGGAGAGGGCGCTTCCTTGA
Downstream 100 bases:
>100_bases ATCCCGGCACGCCCCATTTCCTTTCTTCGACGCGCGCAGCCCCCTCCCGGGGCGGCGCTTCGTGCCCACGGCGCGGCACG GGCGGTCTCCGGACCGTTCC
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 599; Mature: 598
Protein sequence:
>599_residues MTFDELNLAPAILKAVHEQGYETPTPIQAQAIPAVLAGHDLLAGAQTGTGKTAAFTLPMLHRLTQGGTARPAGGIRALVL TPTRELAAQVEENLRAYAKHLDVKSTVIFGGVGMNPQIDRIKRGVDILVATPGRLLDLQQQGFLDLSRVEILVLDEADRM LDMGFIHDVKKVLALVPRDKQSLLFSATFSDEIRELAGTLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKQVLLHIIQ QHNWSQVLVFTRTKFGANNVAEFLTKNGVTAMALHGNKSQSARTQALAGFKSGDIRALVATDIAARGIDIDELPHVVNYE IPNVPEDYVHRIGRTGRAGASGEAVSLVCMDEEGFMMEIERFTKQEIPVQVLEGFGPEEGEKAEPIAMGRQTIWGGAGKP PSREVMQAAAKAARSEMMERIRTNKAAQGERSGGGGGKSGGRGAQAGQGEGGGNGGQKPQRGRGGAQGQGQGNGPRAAHP GNGGHPRSGNGGGGNGGGRGNRPPRSEGGHRSDDLQPRRENAHLGTQLGTHLGPTRHGSGGGQPDPMRTSVDSMSSGRRG GGGFRSGGGGGGYGGGGGGYGGGRGGNRGPRGGGGGYGR
Sequences:
>Translated_599_residues MTFDELNLAPAILKAVHEQGYETPTPIQAQAIPAVLAGHDLLAGAQTGTGKTAAFTLPMLHRLTQGGTARPAGGIRALVL TPTRELAAQVEENLRAYAKHLDVKSTVIFGGVGMNPQIDRIKRGVDILVATPGRLLDLQQQGFLDLSRVEILVLDEADRM LDMGFIHDVKKVLALVPRDKQSLLFSATFSDEIRELAGTLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKQVLLHIIQ QHNWSQVLVFTRTKFGANNVAEFLTKNGVTAMALHGNKSQSARTQALAGFKSGDIRALVATDIAARGIDIDELPHVVNYE IPNVPEDYVHRIGRTGRAGASGEAVSLVCMDEEGFMMEIERFTKQEIPVQVLEGFGPEEGEKAEPIAMGRQTIWGGAGKP PSREVMQAAAKAARSEMMERIRTNKAAQGERSGGGGGKSGGRGAQAGQGEGGGNGGQKPQRGRGGAQGQGQGNGPRAAHP GNGGHPRSGNGGGGNGGGRGNRPPRSEGGHRSDDLQPRRENAHLGTQLGTHLGPTRHGSGGGQPDPMRTSVDSMSSGRRG GGGFRSGGGGGGYGGGGGGYGGGRGGNRGPRGGGGGYGR >Mature_598_residues TFDELNLAPAILKAVHEQGYETPTPIQAQAIPAVLAGHDLLAGAQTGTGKTAAFTLPMLHRLTQGGTARPAGGIRALVLT PTRELAAQVEENLRAYAKHLDVKSTVIFGGVGMNPQIDRIKRGVDILVATPGRLLDLQQQGFLDLSRVEILVLDEADRML DMGFIHDVKKVLALVPRDKQSLLFSATFSDEIRELAGTLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKQVLLHIIQQ HNWSQVLVFTRTKFGANNVAEFLTKNGVTAMALHGNKSQSARTQALAGFKSGDIRALVATDIAARGIDIDELPHVVNYEI PNVPEDYVHRIGRTGRAGASGEAVSLVCMDEEGFMMEIERFTKQEIPVQVLEGFGPEEGEKAEPIAMGRQTIWGGAGKPP SREVMQAAAKAARSEMMERIRTNKAAQGERSGGGGGKSGGRGAQAGQGEGGGNGGQKPQRGRGGAQGQGQGNGPRAAHPG NGGHPRSGNGGGGNGGGRGNRPPRSEGGHRSDDLQPRRENAHLGTQLGTHLGPTRHGSGGGQPDPMRTSVDSMSSGRRGG GGFRSGGGGGGYGGGGGGYGGGRGGNRGPRGGGGGYGR
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI13518015, Length=386, Percent_Identity=37.8238341968912, Blast_Score=273, Evalue=4e-73, Organism=Homo sapiens, GI262231852, Length=386, Percent_Identity=37.8238341968912, Blast_Score=273, Evalue=5e-73, Organism=Homo sapiens, GI216548263, Length=386, Percent_Identity=37.8238341968912, Blast_Score=272, Evalue=8e-73, Organism=Homo sapiens, GI224593278, Length=376, Percent_Identity=40.6914893617021, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI4758138, Length=352, Percent_Identity=38.9204545454545, Blast_Score=269, Evalue=7e-72, Organism=Homo sapiens, GI262118318, Length=386, Percent_Identity=37.8238341968912, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI148613856, Length=352, Percent_Identity=38.6363636363636, Blast_Score=265, Evalue=8e-71, Organism=Homo sapiens, GI38201710, Length=352, Percent_Identity=38.6363636363636, Blast_Score=265, Evalue=8e-71, Organism=Homo sapiens, GI301171467, Length=431, Percent_Identity=36.8909512761021, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI31542656, Length=388, Percent_Identity=39.1752577319588, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI87196351, Length=395, Percent_Identity=38.2278481012658, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI169881239, Length=402, Percent_Identity=37.8109452736318, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI13514809, Length=402, Percent_Identity=37.8109452736318, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI301171475, Length=395, Percent_Identity=38.2278481012658, Blast_Score=259, Evalue=6e-69, Organism=Homo sapiens, GI222352149, Length=383, Percent_Identity=38.3812010443864, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI41327771, Length=389, Percent_Identity=36.5038560411311, Blast_Score=255, Evalue=9e-68, Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=39.6551724137931, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI45446747, Length=363, Percent_Identity=36.3636363636364, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI45446743, Length=363, Percent_Identity=36.3636363636364, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=39.2045454545455, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI20149629, Length=381, Percent_Identity=37.2703412073491, Blast_Score=252, Evalue=8e-67, Organism=Homo sapiens, GI21071032, Length=388, Percent_Identity=36.8556701030928, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI188035877, Length=369, Percent_Identity=37.940379403794, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI51094101, Length=364, Percent_Identity=37.6373626373626, Blast_Score=242, Evalue=6e-64, Organism=Homo sapiens, GI164419743, Length=364, Percent_Identity=37.6373626373626, Blast_Score=242, Evalue=7e-64, Organism=Homo sapiens, GI164664518, Length=361, Percent_Identity=33.2409972299169, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI7661920, Length=367, Percent_Identity=32.9700272479564, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI41327776, Length=381, Percent_Identity=34.1207349081365, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI38327634, Length=366, Percent_Identity=35.5191256830601, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI50659095, Length=376, Percent_Identity=34.8404255319149, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI13514831, Length=389, Percent_Identity=34.1902313624679, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI38569505, Length=387, Percent_Identity=33.0749354005168, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI13129006, Length=387, Percent_Identity=34.3669250645995, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI4758112, Length=351, Percent_Identity=31.9088319088319, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI18375623, Length=351, Percent_Identity=31.9088319088319, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI21040371, Length=351, Percent_Identity=31.6239316239316, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI41327779, Length=368, Percent_Identity=35.3260869565217, Blast_Score=196, Evalue=7e-50, Organism=Homo sapiens, GI38569503, Length=387, Percent_Identity=33.0749354005168, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI4503529, Length=375, Percent_Identity=31.7333333333333, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI83700235, Length=374, Percent_Identity=32.3529411764706, Blast_Score=193, Evalue=5e-49, Organism=Homo sapiens, GI256223453, Length=368, Percent_Identity=30.4347826086957, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI6005743, Length=367, Percent_Identity=33.2425068119891, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI9506931, Length=417, Percent_Identity=30.4556354916067, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI8922886, Length=367, Percent_Identity=33.2425068119891, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI17505907, Length=416, Percent_Identity=30.2884615384615, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=30.6122448979592, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI164419732, Length=363, Percent_Identity=33.3333333333333, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI62241022, Length=349, Percent_Identity=32.9512893982808, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI154759257, Length=426, Percent_Identity=28.4037558685446, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI62241024, Length=328, Percent_Identity=32.6219512195122, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI9966805, Length=312, Percent_Identity=30.7692307692308, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI256773275, Length=386, Percent_Identity=30.0518134715026, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI20336298, Length=233, Percent_Identity=34.3347639484979, Blast_Score=126, Evalue=6e-29, Organism=Escherichia coli, GI1787016, Length=387, Percent_Identity=63.0490956072351, Blast_Score=504, Evalue=1e-144, Organism=Escherichia coli, GI87082221, Length=368, Percent_Identity=43.75, Blast_Score=291, Evalue=6e-80, Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=39.3530997304582, Blast_Score=260, Evalue=2e-70, Organism=Escherichia coli, GI1787605, Length=354, Percent_Identity=42.9378531073446, Blast_Score=247, Evalue=2e-66, Organism=Escherichia coli, GI1788930, Length=432, Percent_Identity=36.8055555555556, Blast_Score=233, Evalue=3e-62, Organism=Caenorhabditis elegans, GI71995514, Length=385, Percent_Identity=38.961038961039, Blast_Score=270, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17510307, Length=385, Percent_Identity=38.961038961039, Blast_Score=270, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17510309, Length=385, Percent_Identity=38.961038961039, Blast_Score=270, Evalue=2e-72, Organism=Caenorhabditis elegans, GI115533224, Length=351, Percent_Identity=39.3162393162393, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI86570094, Length=528, Percent_Identity=34.6590909090909, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI32565321, Length=389, Percent_Identity=36.2467866323907, Blast_Score=250, Evalue=2e-66, Organism=Caenorhabditis elegans, GI71995718, Length=395, Percent_Identity=37.4683544303797, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI17510559, Length=422, Percent_Identity=34.8341232227488, Blast_Score=241, Evalue=8e-64, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=35.4838709677419, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=36.8279569892473, Blast_Score=236, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17537549, Length=380, Percent_Identity=36.5789473684211, Blast_Score=236, Evalue=4e-62, Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=34.6049046321526, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17555296, Length=446, Percent_Identity=34.304932735426, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17552642, Length=385, Percent_Identity=34.5454545454545, Blast_Score=221, Evalue=6e-58, Organism=Caenorhabditis elegans, GI71995724, Length=368, Percent_Identity=33.1521739130435, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71999644, Length=362, Percent_Identity=33.9779005524862, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507121, Length=368, Percent_Identity=32.8804347826087, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507945, Length=357, Percent_Identity=35.0140056022409, Blast_Score=219, Evalue=4e-57, Organism=Caenorhabditis elegans, GI71999646, Length=362, Percent_Identity=33.9779005524862, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17552114, Length=360, Percent_Identity=31.9444444444444, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507881, Length=374, Percent_Identity=33.6898395721925, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI115532546, Length=404, Percent_Identity=32.9207920792079, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI115532548, Length=371, Percent_Identity=33.6927223719677, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71982858, Length=351, Percent_Identity=31.9088319088319, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI193208216, Length=375, Percent_Identity=33.3333333333333, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71990816, Length=410, Percent_Identity=30.9756097560976, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17509811, Length=422, Percent_Identity=30.8056872037915, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17505370, Length=355, Percent_Identity=35.2112676056338, Blast_Score=191, Evalue=9e-49, Organism=Caenorhabditis elegans, GI17536103, Length=384, Percent_Identity=30.9895833333333, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=30.2857142857143, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17556951, Length=368, Percent_Identity=30.7065217391304, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17536101, Length=384, Percent_Identity=30.9895833333333, Blast_Score=168, Evalue=8e-42, Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=31.758530183727, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17508543, Length=391, Percent_Identity=28.1329923273657, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=29.8469387755102, Blast_Score=155, Evalue=6e-38, Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=30.2114803625378, Blast_Score=148, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17553716, Length=375, Percent_Identity=27.7333333333333, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI32564046, Length=383, Percent_Identity=29.7650130548303, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71982862, Length=209, Percent_Identity=33.9712918660287, Blast_Score=129, Evalue=6e-30, Organism=Caenorhabditis elegans, GI25148203, Length=417, Percent_Identity=22.7817745803357, Blast_Score=118, Evalue=9e-27, Organism=Caenorhabditis elegans, GI71997889, Length=380, Percent_Identity=26.5789473684211, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71987152, Length=104, Percent_Identity=40.3846153846154, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17557982, Length=392, Percent_Identity=25, Blast_Score=86, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6324217, Length=379, Percent_Identity=39.0501319261214, Blast_Score=280, Evalue=7e-76, Organism=Saccharomyces cerevisiae, GI6325138, Length=386, Percent_Identity=38.60103626943, Blast_Score=267, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6321360, Length=361, Percent_Identity=42.9362880886427, Blast_Score=264, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6321856, Length=369, Percent_Identity=39.2953929539295, Blast_Score=263, Evalue=9e-71, Organism=Saccharomyces cerevisiae, GI6324778, Length=374, Percent_Identity=38.7700534759358, Blast_Score=257, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6320041, Length=389, Percent_Identity=34.1902313624679, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=355, Percent_Identity=36.056338028169, Blast_Score=226, Evalue=7e-60, Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=32.4324324324324, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6323947, Length=362, Percent_Identity=34.5303867403315, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6320119, Length=387, Percent_Identity=33.5917312661499, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6320449, Length=391, Percent_Identity=33.7595907928389, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6322427, Length=366, Percent_Identity=34.6994535519126, Blast_Score=206, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6324620, Length=358, Percent_Identity=35.195530726257, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=34.1530054644809, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=34.1530054644809, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6321111, Length=392, Percent_Identity=31.6326530612245, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=360, Percent_Identity=31.3888888888889, Blast_Score=190, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6321963, Length=373, Percent_Identity=32.7077747989276, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6320400, Length=413, Percent_Identity=29.2978208232446, Blast_Score=161, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6320173, Length=241, Percent_Identity=33.6099585062241, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=422, Percent_Identity=28.436018957346, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6321267, Length=348, Percent_Identity=29.5977011494253, Blast_Score=150, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=25.9708737864078, Blast_Score=134, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=425, Percent_Identity=28, Blast_Score=127, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6324366, Length=366, Percent_Identity=25.9562841530055, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=454, Percent_Identity=23.1277533039648, Blast_Score=101, Evalue=3e-22, Organism=Drosophila melanogaster, GI24584399, Length=376, Percent_Identity=39.3617021276596, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI17985987, Length=395, Percent_Identity=39.746835443038, Blast_Score=276, Evalue=4e-74, Organism=Drosophila melanogaster, GI21355075, Length=370, Percent_Identity=38.9189189189189, Blast_Score=274, Evalue=1e-73, Organism=Drosophila melanogaster, GI18857967, Length=364, Percent_Identity=38.1868131868132, Blast_Score=264, Evalue=2e-70, Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=39.943342776204, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24642151, Length=364, Percent_Identity=37.3626373626374, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI17977678, Length=390, Percent_Identity=37.1794871794872, Blast_Score=258, Evalue=1e-68, Organism=Drosophila melanogaster, GI24644479, Length=375, Percent_Identity=37.6, Blast_Score=255, Evalue=8e-68, Organism=Drosophila melanogaster, GI24644483, Length=375, Percent_Identity=37.6, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI281361218, Length=375, Percent_Identity=37.6, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24644481, Length=375, Percent_Identity=37.6, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24644487, Length=375, Percent_Identity=37.6, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI45551833, Length=375, Percent_Identity=37.6, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24644485, Length=375, Percent_Identity=37.6, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24584994, Length=388, Percent_Identity=35.3092783505155, Blast_Score=250, Evalue=3e-66, Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=39.1549295774648, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI24585582, Length=382, Percent_Identity=36.3874345549738, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI21356161, Length=386, Percent_Identity=36.0103626943005, Blast_Score=232, Evalue=4e-61, Organism=Drosophila melanogaster, GI24583279, Length=359, Percent_Identity=35.3760445682451, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24583281, Length=359, Percent_Identity=35.3760445682451, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI28575014, Length=366, Percent_Identity=34.9726775956284, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24645031, Length=367, Percent_Identity=33.7874659400545, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=38.3386581469649, Blast_Score=210, Evalue=3e-54, Organism=Drosophila melanogaster, GI17136814, Length=355, Percent_Identity=35.7746478873239, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24582080, Length=373, Percent_Identity=32.7077747989276, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI24582078, Length=373, Percent_Identity=32.7077747989276, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI17136248, Length=373, Percent_Identity=32.7077747989276, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI24582075, Length=373, Percent_Identity=32.7077747989276, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI28571808, Length=357, Percent_Identity=32.7731092436975, Blast_Score=192, Evalue=7e-49, Organism=Drosophila melanogaster, GI28571809, Length=357, Percent_Identity=32.7731092436975, Blast_Score=192, Evalue=7e-49, Organism=Drosophila melanogaster, GI21355559, Length=406, Percent_Identity=34.2364532019704, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI17647335, Length=363, Percent_Identity=30.8539944903581, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=32.1808510638298, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24581954, Length=350, Percent_Identity=31.7142857142857, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581952, Length=350, Percent_Identity=31.7142857142857, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581956, Length=350, Percent_Identity=31.7142857142857, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24666101, Length=357, Percent_Identity=33.8935574229692, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI20130173, Length=428, Percent_Identity=30.607476635514, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI24643725, Length=446, Percent_Identity=27.5784753363229, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24668515, Length=334, Percent_Identity=31.1377245508982, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI19920478, Length=361, Percent_Identity=31.3019390581717, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI17136666, Length=396, Percent_Identity=28.030303030303, Blast_Score=132, Evalue=9e-31, Organism=Drosophila melanogaster, GI24640164, Length=383, Percent_Identity=25.8485639686684, Blast_Score=131, Evalue=2e-30, Organism=Drosophila melanogaster, GI18859659, Length=197, Percent_Identity=36.0406091370558, Blast_Score=125, Evalue=8e-29, Organism=Drosophila melanogaster, GI28571338, Length=197, Percent_Identity=36.0406091370558, Blast_Score=125, Evalue=8e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 62602; Mature: 62470
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDELNLAPAILKAVHEQGYETPTPIQAQAIPAVLAGHDLLAGAQTGTGKTAAFTLPML CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHH HRLTQGGTARPAGGIRALVLTPTRELAAQVEENLRAYAKHLDVKSTVIFGGVGMNPQIDR HHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHH IKRGVDILVATPGRLLDLQQQGFLDLSRVEILVLDEADRMLDMGFIHDVKKVLALVPRDK HHCCCEEEEECCCHHCCHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCH QSLLFSATFSDEIRELAGTLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKQVLLHIIQ HHEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHH QHNWSQVLVFTRTKFGANNVAEFLTKNGVTAMALHGNKSQSARTQALAGFKSGDIRALVA HCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEE TDIAARGIDIDELPHVVNYEIPNVPEDYVHRIGRTGRAGASGEAVSLVCMDEEGFMMEIE HHHHHCCCCHHHCCHHEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHH RFTKQEIPVQVLEGFGPEEGEKAEPIAMGRQTIWGGAGKPPSREVMQAAAKAARSEMMER HHHHHCCCHHHHHCCCCCCCCCCCCHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH IRTNKAAQGERSGGGGGKSGGRGAQAGQGEGGGNGGQKPQRGRGGAQGQGQGNGPRAAHP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNGGHPRSGNGGGGNGGGRGNRPPRSEGGHRSDDLQPRRENAHLGTQLGTHLGPTRHGSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCC GGQPDPMRTSVDSMSSGRRGGGGFRSGGGGGGYGGGGGGYGGGRGGNRGPRGGGGGYGR CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFDELNLAPAILKAVHEQGYETPTPIQAQAIPAVLAGHDLLAGAQTGTGKTAAFTLPML CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHH HRLTQGGTARPAGGIRALVLTPTRELAAQVEENLRAYAKHLDVKSTVIFGGVGMNPQIDR HHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHH IKRGVDILVATPGRLLDLQQQGFLDLSRVEILVLDEADRMLDMGFIHDVKKVLALVPRDK HHCCCEEEEECCCHHCCHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCH QSLLFSATFSDEIRELAGTLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKQVLLHIIQ HHEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHH QHNWSQVLVFTRTKFGANNVAEFLTKNGVTAMALHGNKSQSARTQALAGFKSGDIRALVA HCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEE TDIAARGIDIDELPHVVNYEIPNVPEDYVHRIGRTGRAGASGEAVSLVCMDEEGFMMEIE HHHHHCCCCHHHCCHHEECCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHH RFTKQEIPVQVLEGFGPEEGEKAEPIAMGRQTIWGGAGKPPSREVMQAAAKAARSEMMER HHHHHCCCHHHHHCCCCCCCCCCCCHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH IRTNKAAQGERSGGGGGKSGGRGAQAGQGEGGGNGGQKPQRGRGGAQGQGQGNGPRAAHP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNGGHPRSGNGGGGNGGGRGNRPPRSEGGHRSDDLQPRRENAHLGTQLGTHLGPTRHGSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCC GGQPDPMRTSVDSMSSGRRGGGGFRSGGGGGGYGGGGGGYGGGRGGNRGPRGGGGGYGR CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]