| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is ycjI [C]
Identifier: 120610478
GI number: 120610478
Start: 1947358
End: 1949214
Strand: Reverse
Name: ycjI [C]
Synonym: Aave_1797
Alternate gene names: 120610478
Gene position: 1949214-1947358 (Counterclockwise)
Preceding gene: 120610479
Following gene: 120610433
Centisome position: 36.42
GC content: 73.13
Gene sequence:
>1857_bases ATGAACCAGCCATTCGACGCCCTCCGCCCCTCCAGGACCGCAGCCCCCGGCCTGCCGCCCCGCGCGCTCGCCCCCCTGGT CCTGGCCATCGCCGTGATGGCGGCGGGCTGCAGCAGCACGCCGCTGCCCCCCTGGCCCGCCAGCGCGCCGACGCCCCTGC CCTCCACCGCGCAGACGCGCCCGGAAACGCCGCGCACCGTGCCCCCGCCGCTGGGCACCACGCGCGCGGAAGTGGTGACC ACCCCGATCGCCGACACCCCGATCGTGCCGCAGCCGGAAGGCGCGCCCTCCCCGTCCGCCGCCGCACCGGCCGAGGCCCT GCCCTACTCCGCCGCCGTCGCGGCGCGGTTCCCCGATCCGCCGGTGCGCTACGACACACCCGGCCTGGCCGACGGCCGCC GGGCCTTCACCACCAATGCCGAGGCCTCGCAGTGGCTGCACAGCCTCGCGCCCCAGGCGGGAAGCATGACGAAGACGGCG GTGATCGAGTGGGGCCGCTCGCAGCGCGGCGTTCCGCTCGAGGCACTGGTGGCCACGCGCGGAGCCGGCACTTCGCTGCA GGACCTGGACGCCAGCGGCCGGCCCACCGTGGTGCTGATCGGCCAGCAGCACGGCGACGAGCCCGCAGGCTCGGAAGCGT TGCTGGTGATCGCGCGCGAACTCACGCAGGGCCTGCTGGAGCCGCTGCTGGACCGCATCAATGTCGTCGTCGTGCCGCGC GCGAACCCGGACGGCGCGGAAGCCGGCACCCGCGTGACCGCGAACGGCACCGACATGAACCGCGACCACCTGCTGCTCAC CACCCCCGAGGCGCAGGGGCTGGCCCGGCTGGTGCGGGACTACCGTCCCATCGCCATCGTCGATGCGCACGAATACACCG TGGCCGGCCGCTTCCTGCAGAAGTTCGGCGGCATCCAGCGCTACGACGCGCTGCTGCAGTACGCCACCACCGCCAACGTG GCGGAATTCCTCACCAAGGCGTCCCGCGAGTGGTACTACCAGCCCATGTCCGCCGCCCTGCAGGGCCAGGGGCTGACCAG CGACTGGTACTACACCACCTCCACCGATCCGGCGGACATGCGCGTTTCCATGGGCGGCACGCGGCCGGACACCGGCCGCA ACGTGAACGGCCTCAAGAACGCGGTGAGCCTGCTGGTGGAAACGCGCGGCGTGGGCATCGGCCGCACGCACATCCAGCGC CGGGTGCACACCCAGGTGACGGCGCTGACCAGCGCGCTGCGCAGCACGGCCGAGCGCGCCGCCAACCTGGAGCAGGTACG CTCGTTCGTCGCGCGCGACACGGTCGCGCAGGCCTGCCGCGGCGAGGTCGCCGTGGATGCGGGCCCGACCGCCACGCAGC GCGACCTGCTGATGCTCGACCCGCAGACCGGTGCCGACAAGACCGTGCGCGTGGAATGGAACTCGTCGCTCGACCTGCGC ACCCTCACCAGCCGGCCGCGCCCCTGCGGCTACTGGCTCGGCCCCTCCGCCAGCCAGGCGGTGGACCACCTGAAGATGAT GGGCGTGCAGGTGATGCGGGTGGCCGAGCAGGGATCGCTGCTGGCCGACACCTACCGCGAAACCGCGCGCGACACCGCGC CGCGTGAGGATGTGCGCGGCACCGTGGCCGGCGCGGCGGACACCGTGCGCGTGAAGGTGGAAACCGTGCGCACCGCCATC GACGCACCGGCCGGCAGCTACTACGTGCCGCTCAACCAGCCCCTGGCGAACCTCGCGGTCGCCGCGCTCGAGCCGGACAC GCAGAACAGCTATTTCGCGAACCGGCTCATCGGCTCGCTGGGCGACATGGCCCGGGTGATGACCACGCCGACGCTGGTGT TCGAGGAACCGGACTGA
Upstream 100 bases:
>100_bases ATGCCCCGGTACACGGGACTGGCACCGACACGCTCCGGCCGCGGTGCCGGGTAACATCGGCCCCGCCTGCCACACCCGGC CGCACGCGGCCCGATCGACC
Downstream 100 bases:
>100_bases TCCGGCCCGCCGGCGCCACCCGGAACGCGCCGGCGGCTCAGGCGGACACGTGCCGCTCGTCCAGCGCGCCCGGCACGGTG GTGCCCGGCCGCTCCTGGCC
Product: peptidase M14, carboxypeptidase A
Products: NA
Alternate protein names: Carboxypeptidase; Zinc Carboxypeptidase Family Protein; Zinc-Carboxypeptidase; Zink-Carboxypeptidase; Zinc Carboxypeptidase Family; M14 Family Carboxypeptidase; Secreted Protein
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MNQPFDALRPSRTAAPGLPPRALAPLVLAIAVMAAGCSSTPLPPWPASAPTPLPSTAQTRPETPRTVPPPLGTTRAEVVT TPIADTPIVPQPEGAPSPSAAAPAEALPYSAAVAARFPDPPVRYDTPGLADGRRAFTTNAEASQWLHSLAPQAGSMTKTA VIEWGRSQRGVPLEALVATRGAGTSLQDLDASGRPTVVLIGQQHGDEPAGSEALLVIARELTQGLLEPLLDRINVVVVPR ANPDGAEAGTRVTANGTDMNRDHLLLTTPEAQGLARLVRDYRPIAIVDAHEYTVAGRFLQKFGGIQRYDALLQYATTANV AEFLTKASREWYYQPMSAALQGQGLTSDWYYTTSTDPADMRVSMGGTRPDTGRNVNGLKNAVSLLVETRGVGIGRTHIQR RVHTQVTALTSALRSTAERAANLEQVRSFVARDTVAQACRGEVAVDAGPTATQRDLLMLDPQTGADKTVRVEWNSSLDLR TLTSRPRPCGYWLGPSASQAVDHLKMMGVQVMRVAEQGSLLADTYRETARDTAPREDVRGTVAGAADTVRVKVETVRTAI DAPAGSYYVPLNQPLANLAVAALEPDTQNSYFANRLIGSLGDMARVMTTPTLVFEEPD
Sequences:
>Translated_618_residues MNQPFDALRPSRTAAPGLPPRALAPLVLAIAVMAAGCSSTPLPPWPASAPTPLPSTAQTRPETPRTVPPPLGTTRAEVVT TPIADTPIVPQPEGAPSPSAAAPAEALPYSAAVAARFPDPPVRYDTPGLADGRRAFTTNAEASQWLHSLAPQAGSMTKTA VIEWGRSQRGVPLEALVATRGAGTSLQDLDASGRPTVVLIGQQHGDEPAGSEALLVIARELTQGLLEPLLDRINVVVVPR ANPDGAEAGTRVTANGTDMNRDHLLLTTPEAQGLARLVRDYRPIAIVDAHEYTVAGRFLQKFGGIQRYDALLQYATTANV AEFLTKASREWYYQPMSAALQGQGLTSDWYYTTSTDPADMRVSMGGTRPDTGRNVNGLKNAVSLLVETRGVGIGRTHIQR RVHTQVTALTSALRSTAERAANLEQVRSFVARDTVAQACRGEVAVDAGPTATQRDLLMLDPQTGADKTVRVEWNSSLDLR TLTSRPRPCGYWLGPSASQAVDHLKMMGVQVMRVAEQGSLLADTYRETARDTAPREDVRGTVAGAADTVRVKVETVRTAI DAPAGSYYVPLNQPLANLAVAALEPDTQNSYFANRLIGSLGDMARVMTTPTLVFEEPD >Mature_618_residues MNQPFDALRPSRTAAPGLPPRALAPLVLAIAVMAAGCSSTPLPPWPASAPTPLPSTAQTRPETPRTVPPPLGTTRAEVVT TPIADTPIVPQPEGAPSPSAAAPAEALPYSAAVAARFPDPPVRYDTPGLADGRRAFTTNAEASQWLHSLAPQAGSMTKTA VIEWGRSQRGVPLEALVATRGAGTSLQDLDASGRPTVVLIGQQHGDEPAGSEALLVIARELTQGLLEPLLDRINVVVVPR ANPDGAEAGTRVTANGTDMNRDHLLLTTPEAQGLARLVRDYRPIAIVDAHEYTVAGRFLQKFGGIQRYDALLQYATTANV AEFLTKASREWYYQPMSAALQGQGLTSDWYYTTSTDPADMRVSMGGTRPDTGRNVNGLKNAVSLLVETRGVGIGRTHIQR RVHTQVTALTSALRSTAERAANLEQVRSFVARDTVAQACRGEVAVDAGPTATQRDLLMLDPQTGADKTVRVEWNSSLDLR TLTSRPRPCGYWLGPSASQAVDHLKMMGVQVMRVAEQGSLLADTYRETARDTAPREDVRGTVAGAADTVRVKVETVRTAI DAPAGSYYVPLNQPLANLAVAALEPDTQNSYFANRLIGSLGDMARVMTTPTLVFEEPD
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65884; Mature: 65884
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPFDALRPSRTAAPGLPPRALAPLVLAIAVMAAGCSSTPLPPWPASAPTPLPSTAQTR CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PETPRTVPPPLGTTRAEVVTTPIADTPIVPQPEGAPSPSAAAPAEALPYSAAVAARFPDP CCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHEECCCCC PVRYDTPGLADGRRAFTTNAEASQWLHSLAPQAGSMTKTAVIEWGRSQRGVPLEALVATR CCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHCC GAGTSLQDLDASGRPTVVLIGQQHGDEPAGSEALLVIARELTQGLLEPLLDRINVVVVPR CCCCCHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEC ANPDGAEAGTRVTANGTDMNRDHLLLTTPEAQGLARLVRDYRPIAIVDAHEYTVAGRFLQ CCCCCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH KFGGIQRYDALLQYATTANVAEFLTKASREWYYQPMSAALQGQGLTSDWYYTTSTDPADM HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEECCCCCCCE RVSMGGTRPDTGRNVNGLKNAVSLLVETRGVGIGRTHIQRRVHTQVTALTSALRSTAERA EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ANLEQVRSFVARDTVAQACRGEVAVDAGPTATQRDLLMLDPQTGADKTVRVEWNSSLDLR HCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEE TLTSRPRPCGYWLGPSASQAVDHLKMMGVQVMRVAEQGSLLADTYRETARDTAPREDVRG ECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCE TVAGAADTVRVKVETVRTAIDAPAGSYYVPLNQPLANLAVAALEPDTQNSYFANRLIGSL EECCCCCEEEEEHHHHHHHHCCCCCCEEEECCCCHHHHEEEEECCCCCCHHHHHHHHHHH GDMARVMTTPTLVFEEPD HHHHHHHCCCEEEEECCC >Mature Secondary Structure MNQPFDALRPSRTAAPGLPPRALAPLVLAIAVMAAGCSSTPLPPWPASAPTPLPSTAQTR CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PETPRTVPPPLGTTRAEVVTTPIADTPIVPQPEGAPSPSAAAPAEALPYSAAVAARFPDP CCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHEECCCCC PVRYDTPGLADGRRAFTTNAEASQWLHSLAPQAGSMTKTAVIEWGRSQRGVPLEALVATR CCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCHHHHHHCC GAGTSLQDLDASGRPTVVLIGQQHGDEPAGSEALLVIARELTQGLLEPLLDRINVVVVPR CCCCCHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEC ANPDGAEAGTRVTANGTDMNRDHLLLTTPEAQGLARLVRDYRPIAIVDAHEYTVAGRFLQ CCCCCCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH KFGGIQRYDALLQYATTANVAEFLTKASREWYYQPMSAALQGQGLTSDWYYTTSTDPADM HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEECCCCCCCE RVSMGGTRPDTGRNVNGLKNAVSLLVETRGVGIGRTHIQRRVHTQVTALTSALRSTAERA EEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ANLEQVRSFVARDTVAQACRGEVAVDAGPTATQRDLLMLDPQTGADKTVRVEWNSSLDLR HCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCEE TLTSRPRPCGYWLGPSASQAVDHLKMMGVQVMRVAEQGSLLADTYRETARDTAPREDVRG ECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCE TVAGAADTVRVKVETVRTAIDAPAGSYYVPLNQPLANLAVAALEPDTQNSYFANRLIGSL EECCCCCEEEEEHHHHHHHHCCCCCCEEEECCCCHHHHEEEEECCCCCCHHHHHHHHHHH GDMARVMTTPTLVFEEPD HHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA