Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610442

Identifier: 120610442

GI number: 120610442

Start: 1916804

End: 1917274

Strand: Direct

Name: 120610442

Synonym: Aave_1759

Alternate gene names: NA

Gene position: 1916804-1917274 (Clockwise)

Preceding gene: 120610441

Following gene: 120610443

Centisome position: 35.81

GC content: 67.94

Gene sequence:

>471_bases
ATGAGCGGCCACGCATTCAGCGAAGTTGTCGAGTTGATTTTCACGAAGCTGTCCGTGCGCTACGGCGCCGAGTGGCTGCG
GCAGTGGGACGGCGTGGACATGGCGCTGGTCAAGGACGACTGGGAGGAGGAGCTCAGCGGTTTCGCGAGCAACCTGGAGC
CGTTGCGGCATGCACTGCGGCACCTGCCGGTGAAATGCCCCAACGTGGCCCAATTCCGCGCCCTGGCGAACGCATGCCCC
CCGGCCGAGGTGCCGCGCCTGGAGGCGCCGCGCGCATCCGAGCGGGTAGTGGCGGAGGAGATTGCGAAGCAGACGGGGCT
CAAGCGCGCCATCGCGCACAACGAGAACCGGAGCAAGGACTGGGCGCGCGCGATCGTCTCTCGTGCCGCGGCCGGCGATC
GGATCACGCCCTACAGCCTGCGCAGCGCGCGCCAGGCCCTGGGCATGGAAGGGCGGCAAAAATGGCAATGA

Upstream 100 bases:

>100_bases
GCGGGGGCTTTGCCGCGGCCCAACGGTTCATGGCCGGCGATTCGGGCGTCATCGACGTGCCGGCGCGCACCGCTTCTCCC
CGTCTGGCAGGAGGTGCCCG

Downstream 100 bases:

>100_bases
CCTGTGCAACCTGCACTCACTGGGCCCTGCGCCAGAACCGCGAGATGGCGAAGCAGGGTATGGCCGCCTGCTCGCTCGGA
AAGCCCTGGACTTTCTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSGHAFSEVVELIFTKLSVRYGAEWLRQWDGVDMALVKDDWEEELSGFASNLEPLRHALRHLPVKCPNVAQFRALANACP
PAEVPRLEAPRASERVVAEEIAKQTGLKRAIAHNENRSKDWARAIVSRAAAGDRITPYSLRSARQALGMEGRQKWQ

Sequences:

>Translated_156_residues
MSGHAFSEVVELIFTKLSVRYGAEWLRQWDGVDMALVKDDWEEELSGFASNLEPLRHALRHLPVKCPNVAQFRALANACP
PAEVPRLEAPRASERVVAEEIAKQTGLKRAIAHNENRSKDWARAIVSRAAAGDRITPYSLRSARQALGMEGRQKWQ
>Mature_155_residues
SGHAFSEVVELIFTKLSVRYGAEWLRQWDGVDMALVKDDWEEELSGFASNLEPLRHALRHLPVKCPNVAQFRALANACPP
AEVPRLEAPRASERVVAEEIAKQTGLKRAIAHNENRSKDWARAIVSRAAAGDRITPYSLRSARQALGMEGRQKWQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17529; Mature: 17398

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHAFSEVVELIFTKLSVRYGAEWLRQWDGVDMALVKDDWEEELSGFASNLEPLRHALR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLPVKCPNVAQFRALANACPPAEVPRLEAPRASERVVAEEIAKQTGLKRAIAHNENRSKD
HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WARAIVSRAAAGDRITPYSLRSARQALGMEGRQKWQ
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SGHAFSEVVELIFTKLSVRYGAEWLRQWDGVDMALVKDDWEEELSGFASNLEPLRHALR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLPVKCPNVAQFRALANACPPAEVPRLEAPRASERVVAEEIAKQTGLKRAIAHNENRSKD
HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WARAIVSRAAAGDRITPYSLRSARQALGMEGRQKWQ
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA