| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610443
Identifier: 120610443
GI number: 120610443
Start: 1917462
End: 1918601
Strand: Direct
Name: 120610443
Synonym: Aave_1760
Alternate gene names: NA
Gene position: 1917462-1918601 (Clockwise)
Preceding gene: 120610442
Following gene: 120610444
Centisome position: 35.82
GC content: 70.7
Gene sequence:
>1140_bases ATGGCCACGAAGAAGAACCTTGCACAGCTGATGCAGGTGCTGAAGGCCGCTGGGGGCTCCGCCCGCGAGAGCGAGTTGCG CGCCGCCACGGGCTGGGACGCTGAGCACCTGACGATGGTGCTGGAAGAAGCGCGCGAGCGCCTGCTGGCGCGGCCGGTCG CCACGAAGCCCCAGAAGGACACCGCATGGGTGGCCGTGGACGTGCTGATCGCGCGGTGCCCCTGGAAGCCTGCCCAGATC CTCAAGGCCATTGCCGGCCAGGAGATGAGCACCCGCGAGCTGGCGGCCCTGGCCAAGTCCCCCGAGGTGGCTATGGGGCT GGTGCTGCGCCGGATGGCGCGGGCGAAGCGGATCAAGCTGGCCGCGTTCGACGGCCTCCGGAAGTGGGTGCCCTTCGAGC GCCACATCGCGCCCGGGGGCTCGCGGCCCGAGCCCTACGACGGTGACCTGCTCGCGCTGATTGCCCGGCACCAGCCCATG CGGCTGGAGCACCTGGCGGAGCTGACGGGGCGCGGCCGCGTCTACACCCGAGCGCGGGTGCACGCCCTGCGCCGAGCGGG GAAGCTGGCCATCCGCGGCGTGGACGGCAGTTGGCGCTACGTGCTGCCGGACTACGTGCGCACATCCGCCGAGATCGAAC AGGACATCCTGCTGCGTTGCGAGGACGTGGGCGGGGACTGCTTGAAGTGGAGCGGCGCGCGCAACAAGCAGGGGCACCCG CTGGTGCGCCACGAGGGGAACATCACCCGGGTGGACATGGTGCTGTGGACGGCCGTGCACGGGAGGGAATTGAAGAAGGG GCACACGCTGGTCCAGACGTGCGAGACGCCCGGCTGCTGCAACCACGACCACCACAAGCACGTCACGCGCAGCGCGGCGA TGCGCAAGGCCTTCGCGGCCATCGGATTCGGGGGCGAGAAGCACGGCCGGCGGGTGTCGGCCGCCATTCGGCACAAGGTC GGGTCGCTGTCCCCCGATCAGGTGGAGCTGATCCGCACCAGCCCCCTGACGGGTGCCGAGCCGGCGCGCCAGCTGGGGAA GACCAAATCGGTGGTGCAGGATGCTCGCGCCGGCCGGAGTTATCGCGACTACGTGGTGGCGAGCCCGTTCGCGGGACTGG GCGGGAGGTCGGCATGCTGA
Upstream 100 bases:
>100_bases GGACTTTCTTCCCGCCGCAGCACGCCTGCGCCAAGCATGCGCCAGCGCCCGCAGACGTTCAGGCCGGCCGGGAGCGCTGG CTGAAGAAAGGAGGCCGCTG
Downstream 100 bases:
>100_bases TCCTCGGGATGGACCCCGGCGCCCATACGGGCGTGGCCACCTACGTGAACGGCGAGCTGACCGAGTTGGAGACCGTTCCG CCGCACCACATCGAGCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MATKKNLAQLMQVLKAAGGSARESELRAATGWDAEHLTMVLEEARERLLARPVATKPQKDTAWVAVDVLIARCPWKPAQI LKAIAGQEMSTRELAALAKSPEVAMGLVLRRMARAKRIKLAAFDGLRKWVPFERHIAPGGSRPEPYDGDLLALIARHQPM RLEHLAELTGRGRVYTRARVHALRRAGKLAIRGVDGSWRYVLPDYVRTSAEIEQDILLRCEDVGGDCLKWSGARNKQGHP LVRHEGNITRVDMVLWTAVHGRELKKGHTLVQTCETPGCCNHDHHKHVTRSAAMRKAFAAIGFGGEKHGRRVSAAIRHKV GSLSPDQVELIRTSPLTGAEPARQLGKTKSVVQDARAGRSYRDYVVASPFAGLGGRSAC
Sequences:
>Translated_379_residues MATKKNLAQLMQVLKAAGGSARESELRAATGWDAEHLTMVLEEARERLLARPVATKPQKDTAWVAVDVLIARCPWKPAQI LKAIAGQEMSTRELAALAKSPEVAMGLVLRRMARAKRIKLAAFDGLRKWVPFERHIAPGGSRPEPYDGDLLALIARHQPM RLEHLAELTGRGRVYTRARVHALRRAGKLAIRGVDGSWRYVLPDYVRTSAEIEQDILLRCEDVGGDCLKWSGARNKQGHP LVRHEGNITRVDMVLWTAVHGRELKKGHTLVQTCETPGCCNHDHHKHVTRSAAMRKAFAAIGFGGEKHGRRVSAAIRHKV GSLSPDQVELIRTSPLTGAEPARQLGKTKSVVQDARAGRSYRDYVVASPFAGLGGRSAC >Mature_378_residues ATKKNLAQLMQVLKAAGGSARESELRAATGWDAEHLTMVLEEARERLLARPVATKPQKDTAWVAVDVLIARCPWKPAQIL KAIAGQEMSTRELAALAKSPEVAMGLVLRRMARAKRIKLAAFDGLRKWVPFERHIAPGGSRPEPYDGDLLALIARHQPMR LEHLAELTGRGRVYTRARVHALRRAGKLAIRGVDGSWRYVLPDYVRTSAEIEQDILLRCEDVGGDCLKWSGARNKQGHPL VRHEGNITRVDMVLWTAVHGRELKKGHTLVQTCETPGCCNHDHHKHVTRSAAMRKAFAAIGFGGEKHGRRVSAAIRHKVG SLSPDQVELIRTSPLTGAEPARQLGKTKSVVQDARAGRSYRDYVVASPFAGLGGRSAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41718; Mature: 41587
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKKNLAQLMQVLKAAGGSARESELRAATGWDAEHLTMVLEEARERLLARPVATKPQKD CCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC TAWVAVDVLIARCPWKPAQILKAIAGQEMSTRELAALAKSPEVAMGLVLRRMARAKRIKL CHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AAFDGLRKWVPFERHIAPGGSRPEPYDGDLLALIARHQPMRLEHLAELTGRGRVYTRARV HHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHH HALRRAGKLAIRGVDGSWRYVLPDYVRTSAEIEQDILLRCEDVGGDCLKWSGARNKQGHP HHHHHCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC LVRHEGNITRVDMVLWTAVHGRELKKGHTLVQTCETPGCCNHDHHKHVTRSAAMRKAFAA CEECCCCCEEEHHHHHHHHHCHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH IGFGGEKHGRRVSAAIRHKVGSLSPDQVELIRTSPLTGAEPARQLGKTKSVVQDARAGRS HCCCCHHHCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC YRDYVVASPFAGLGGRSAC HHCEEEECCCCCCCCCCCC >Mature Secondary Structure ATKKNLAQLMQVLKAAGGSARESELRAATGWDAEHLTMVLEEARERLLARPVATKPQKD CCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC TAWVAVDVLIARCPWKPAQILKAIAGQEMSTRELAALAKSPEVAMGLVLRRMARAKRIKL CHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AAFDGLRKWVPFERHIAPGGSRPEPYDGDLLALIARHQPMRLEHLAELTGRGRVYTRARV HHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHH HALRRAGKLAIRGVDGSWRYVLPDYVRTSAEIEQDILLRCEDVGGDCLKWSGARNKQGHP HHHHHCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC LVRHEGNITRVDMVLWTAVHGRELKKGHTLVQTCETPGCCNHDHHKHVTRSAAMRKAFAA CEECCCCCEEEHHHHHHHHHCHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH IGFGGEKHGRRVSAAIRHKVGSLSPDQVELIRTSPLTGAEPARQLGKTKSVVQDARAGRS HCCCCHHHCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC YRDYVVASPFAGLGGRSAC HHCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA