| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610441
Identifier: 120610441
GI number: 120610441
Start: 1915836
End: 1916807
Strand: Direct
Name: 120610441
Synonym: Aave_1758
Alternate gene names: NA
Gene position: 1915836-1916807 (Clockwise)
Preceding gene: 120610440
Following gene: 120610442
Centisome position: 35.79
GC content: 69.44
Gene sequence:
>972_bases ATGAAGCTCCCATGGTTCCGCGTCTACACCGAGATGGTGGACAACGAGACGCTCAAGCTGGTGGCCTTCGAGGACCGCTG GCATTTCATCGCGCTCCTGTGCTTGAAGGGCCAGGGGCTACTGGACAAGGACGAGGCGACCGCGCTCAAGCTGCGCAAGG TGGCCGTGAAGATGGGCCTGGACCTGCGCACGCTGGAAGAGGTCGCGCGCCGCCTGGACGAGGTGGGGCTGATCGATCGT GAGACGCTGCAGCCCCGGAACTGGGACGACCGCCAGATGCGCAGCGACGCCGACACCACTGCCGCAGAGCGAAAGCGGCG GCAGCGCCAGCGGGAGAAGGAGACCTCCGCAGCCCCCGCAAGCGATGTCACGGAGATGTCACGCGTGACAACCGTGACAG TCACGCGTACAGATACAGATACAGAAGGAGAAGAAGAAAAAGAACCTGCTGTAGAACTGGAGGGAGAGGCGGCTCGTGCC GTGCCGGGCGCTGCGCCTGCGGCTCCGCCAGCACCAGCCAAGCGTGCTCCCGCTGCTTCGCGTCTCCCTGCGGACTGGAC GTTGCCCGAAGACTGGGCGGCATGGGCCGAGCAGGAGCGGCCGGACCTGGGCGCCGATGGTGTGCGCCGCGAAGGCGACT GCTTCGCCGACTACTGGCATGCGAAGGCCGGCGCGGACGCCCGCAAGGCCGACTGGCTGGCGACCTGGCGCAACTGGGTG CGGCGTGCAGGCGGAGCGCCGGGTGCGATGACGCGCACCGCGCTGCGCGGCCCGGGCCCCGACGTCCCGACCGAAACCTA CGCCCAGCGTGCGGCCCGCCAGCGCATGGAGGAGGTGGCACCCATGGCGGCGCGGAAGGCGCCCGGCGGCGGGGGCTTTG CCGCGGCCCAACGGTTCATGGCCGGCGATTCGGGCGTCATCGACGTGCCGGCGCGCACCGCTTCTCCCCGTCTGGCAGGA GGTGCCCGATGA
Upstream 100 bases:
>100_bases CCTGCGATCACATCCATCCCGAATCGAAGGGTGGCCCGACGACGCTGGACAACCTCCAGACGATGTGCAGGCCCTGCAAT TCCAAGAAAGGGGTGCGCGC
Downstream 100 bases:
>100_bases GCGGCCACGCATTCAGCGAAGTTGTCGAGTTGATTTTCACGAAGCTGTCCGTGCGCTACGGCGCCGAGTGGCTGCGGCAG TGGGACGGCGTGGACATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKLPWFRVYTEMVDNETLKLVAFEDRWHFIALLCLKGQGLLDKDEATALKLRKVAVKMGLDLRTLEEVARRLDEVGLIDR ETLQPRNWDDRQMRSDADTTAAERKRRQRQREKETSAAPASDVTEMSRVTTVTVTRTDTDTEGEEEKEPAVELEGEAARA VPGAAPAAPPAPAKRAPAASRLPADWTLPEDWAAWAEQERPDLGADGVRREGDCFADYWHAKAGADARKADWLATWRNWV RRAGGAPGAMTRTALRGPGPDVPTETYAQRAARQRMEEVAPMAARKAPGGGGFAAAQRFMAGDSGVIDVPARTASPRLAG GAR
Sequences:
>Translated_323_residues MKLPWFRVYTEMVDNETLKLVAFEDRWHFIALLCLKGQGLLDKDEATALKLRKVAVKMGLDLRTLEEVARRLDEVGLIDR ETLQPRNWDDRQMRSDADTTAAERKRRQRQREKETSAAPASDVTEMSRVTTVTVTRTDTDTEGEEEKEPAVELEGEAARA VPGAAPAAPPAPAKRAPAASRLPADWTLPEDWAAWAEQERPDLGADGVRREGDCFADYWHAKAGADARKADWLATWRNWV RRAGGAPGAMTRTALRGPGPDVPTETYAQRAARQRMEEVAPMAARKAPGGGGFAAAQRFMAGDSGVIDVPARTASPRLAG GAR >Mature_323_residues MKLPWFRVYTEMVDNETLKLVAFEDRWHFIALLCLKGQGLLDKDEATALKLRKVAVKMGLDLRTLEEVARRLDEVGLIDR ETLQPRNWDDRQMRSDADTTAAERKRRQRQREKETSAAPASDVTEMSRVTTVTVTRTDTDTEGEEEKEPAVELEGEAARA VPGAAPAAPPAPAKRAPAASRLPADWTLPEDWAAWAEQERPDLGADGVRREGDCFADYWHAKAGADARKADWLATWRNWV RRAGGAPGAMTRTALRGPGPDVPTETYAQRAARQRMEEVAPMAARKAPGGGGFAAAQRFMAGDSGVIDVPARTASPRLAG GAR
Specific function: Unknown
COG id: COG3756
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35496; Mature: 35496
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPWFRVYTEMVDNETLKLVAFEDRWHFIALLCLKGQGLLDKDEATALKLRKVAVKMGL CCCCHHHHHHHHHCCCEEEEEEECCCCEEEEHEECCCCCCCCCHHHHHHHHHHHHHHHCC DLRTLEEVARRLDEVGLIDRETLQPRNWDDRQMRSDADTTAAERKRRQRQREKETSAAPA CHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH SDVTEMSRVTTVTVTRTDTDTEGEEEKEPAVELEGEAARAVPGAAPAAPPAPAKRAPAAS HHHHHHHHEEEEEEEECCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCCCC RLPADWTLPEDWAAWAEQERPDLGADGVRREGDCFADYWHAKAGADARKADWLATWRNWV CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH RRAGGAPGAMTRTALRGPGPDVPTETYAQRAARQRMEEVAPMAARKAPGGGGFAAAQRFM HHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AGDSGVIDVPARTASPRLAGGAR CCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MKLPWFRVYTEMVDNETLKLVAFEDRWHFIALLCLKGQGLLDKDEATALKLRKVAVKMGL CCCCHHHHHHHHHCCCEEEEEEECCCCEEEEHEECCCCCCCCCHHHHHHHHHHHHHHHCC DLRTLEEVARRLDEVGLIDRETLQPRNWDDRQMRSDADTTAAERKRRQRQREKETSAAPA CHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH SDVTEMSRVTTVTVTRTDTDTEGEEEKEPAVELEGEAARAVPGAAPAAPPAPAKRAPAAS HHHHHHHHEEEEEEEECCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCCCC RLPADWTLPEDWAAWAEQERPDLGADGVRREGDCFADYWHAKAGADARKADWLATWRNWV CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH RRAGGAPGAMTRTALRGPGPDVPTETYAQRAARQRMEEVAPMAARKAPGGGGFAAAQRFM HHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AGDSGVIDVPARTASPRLAGGAR CCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA