| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120610442
Identifier: 120610442
GI number: 120610442
Start: 1916804
End: 1917274
Strand: Direct
Name: 120610442
Synonym: Aave_1759
Alternate gene names: NA
Gene position: 1916804-1917274 (Clockwise)
Preceding gene: 120610441
Following gene: 120610443
Centisome position: 35.81
GC content: 67.94
Gene sequence:
>471_bases ATGAGCGGCCACGCATTCAGCGAAGTTGTCGAGTTGATTTTCACGAAGCTGTCCGTGCGCTACGGCGCCGAGTGGCTGCG GCAGTGGGACGGCGTGGACATGGCGCTGGTCAAGGACGACTGGGAGGAGGAGCTCAGCGGTTTCGCGAGCAACCTGGAGC CGTTGCGGCATGCACTGCGGCACCTGCCGGTGAAATGCCCCAACGTGGCCCAATTCCGCGCCCTGGCGAACGCATGCCCC CCGGCCGAGGTGCCGCGCCTGGAGGCGCCGCGCGCATCCGAGCGGGTAGTGGCGGAGGAGATTGCGAAGCAGACGGGGCT CAAGCGCGCCATCGCGCACAACGAGAACCGGAGCAAGGACTGGGCGCGCGCGATCGTCTCTCGTGCCGCGGCCGGCGATC GGATCACGCCCTACAGCCTGCGCAGCGCGCGCCAGGCCCTGGGCATGGAAGGGCGGCAAAAATGGCAATGA
Upstream 100 bases:
>100_bases GCGGGGGCTTTGCCGCGGCCCAACGGTTCATGGCCGGCGATTCGGGCGTCATCGACGTGCCGGCGCGCACCGCTTCTCCC CGTCTGGCAGGAGGTGCCCG
Downstream 100 bases:
>100_bases CCTGTGCAACCTGCACTCACTGGGCCCTGCGCCAGAACCGCGAGATGGCGAAGCAGGGTATGGCCGCCTGCTCGCTCGGA AAGCCCTGGACTTTCTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSGHAFSEVVELIFTKLSVRYGAEWLRQWDGVDMALVKDDWEEELSGFASNLEPLRHALRHLPVKCPNVAQFRALANACP PAEVPRLEAPRASERVVAEEIAKQTGLKRAIAHNENRSKDWARAIVSRAAAGDRITPYSLRSARQALGMEGRQKWQ
Sequences:
>Translated_156_residues MSGHAFSEVVELIFTKLSVRYGAEWLRQWDGVDMALVKDDWEEELSGFASNLEPLRHALRHLPVKCPNVAQFRALANACP PAEVPRLEAPRASERVVAEEIAKQTGLKRAIAHNENRSKDWARAIVSRAAAGDRITPYSLRSARQALGMEGRQKWQ >Mature_155_residues SGHAFSEVVELIFTKLSVRYGAEWLRQWDGVDMALVKDDWEEELSGFASNLEPLRHALRHLPVKCPNVAQFRALANACPP AEVPRLEAPRASERVVAEEIAKQTGLKRAIAHNENRSKDWARAIVSRAAAGDRITPYSLRSARQALGMEGRQKWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17529; Mature: 17398
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGHAFSEVVELIFTKLSVRYGAEWLRQWDGVDMALVKDDWEEELSGFASNLEPLRHALR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HLPVKCPNVAQFRALANACPPAEVPRLEAPRASERVVAEEIAKQTGLKRAIAHNENRSKD HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH WARAIVSRAAAGDRITPYSLRSARQALGMEGRQKWQ HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SGHAFSEVVELIFTKLSVRYGAEWLRQWDGVDMALVKDDWEEELSGFASNLEPLRHALR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH HLPVKCPNVAQFRALANACPPAEVPRLEAPRASERVVAEEIAKQTGLKRAIAHNENRSKD HCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH WARAIVSRAAAGDRITPYSLRSARQALGMEGRQKWQ HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA