Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is ymfN [C]

Identifier: 120610374

GI number: 120610374

Start: 1848278

End: 1849513

Strand: Direct

Name: ymfN [C]

Synonym: Aave_1691

Alternate gene names: 120610374

Gene position: 1848278-1849513 (Clockwise)

Preceding gene: 120610373

Following gene: 120610375

Centisome position: 34.53

GC content: 67.23

Gene sequence:

>1236_bases
ATGAGCACGATCGTGATGGCGGCCTGCTGGCCGCTGCAAATGAGCGGGACCCAGAAGGCCGTGCTGATCTCGCTGGCGGA
CCAAGCCAACGACCAGGGCGTGTGCTGGCCCGCGGTGGAGACGATTGCCGAGCGCACCTGCGCATCGGCGCGTGCGGTGC
AGGAGGCGTTGAAGTGGCTGGAGGAGCACGGTGCGATCACCCGGGAGCGGCGCAGCCAGCGCAGCACCATGTACACGGTG
ACGCCGTCAGCCTTCACAGGTAAGGCATCCAAGCCGAGCCACTACGTCTATCGGATCGAGCACAAGCCATCGGGCCGGTT
CTACATCGGCCTGCGCAGCAGCCTATGCCTCCCAGAGGATGACGACTACTGGGGCTCCGGGGCTGCGGCTGTCTGGATCC
AGAAGAACAAGGCGGATTGCGTGCGCACGGTGCTGGCTGTGCTGCCCACCCGTCGAGAGGCGGCGGAGTACGAGGTGCTC
GAAACGGAAGCAGCGATCCGTGACTCGCTCTGCATGAATCGGCGAGTGGCTGCGGGCGATGGCGGCCGTCGTGCTGCCGA
ATTGATGGGTGCAGATGGCGCACCCGCAGATGGCGCACCTGCAGCACATGCACCCGCAGAATCCGCACCCGCGCCAAATG
CACCCCTTGGTGCGGATGGCGCGCCTGTGGGTGCAGCAGGCGCACCCACTAACCCGCAGATGGCGCGCTTTGAGGGTGCA
GCAGGCGCACCCGAACCATCATTGAACCGTAATAGGAACCACCAGAGAACCACCAATGAACCATCCCCGCCTGCCCGGCA
GGCGGGCTCGGCCGGGGCTGGCGGCGAGGAGGAAACGGCGCTGCAGGCGGCATGCCGGACCACGTGGGCGGCATACACCG
AGGCCTACGAGCACCGCTACGGCGTGAAGCCGGTGCGCAATGCCCCGGTCAACGCGAACGTCAAGACGCTGGTGAAGAGG
CTCGGCCACGACGAAGCGCCGCTGGTGGCCGCGTGGTACGTCGCCAGCGTGAACGAGGCGTTCGTGGTGAAGAACTCGCA
CAGCGTGGGGGTGCTGGTGAACCAGGCCGAGGGCTATCGGACGCAGTGGGCTCGAGGCCAAGCGGTGACGGGCACGGCTG
CGCAGGCCGCCGACAAGACCAGCGCCAACGCTGACGCCATCGAGGAGGCGAAACGCCTGTCGCGTGAGCGGGCCGCCCGT
CGCGCAGCTCAGAGCGGGGAGGGCTGCAATGCTTGA

Upstream 100 bases:

>100_bases
ACGCCTTCAACACCACGAAGTTCACCCCGAAGGGCGTGGAGTGGGTCGCGGGGCTTTGGGGCAGGCATCAGGCGCGGAAG
GCGCAGGGGGCGGCGTCCCA

Downstream 100 bases:

>100_bases
CGAAGACGCACGCGACTGGCTCGCCGAAGAGCTGGGCGCCACCATGGAGCTGGCCGGCCAAGCCATTCGCCCCGCCGCGC
TGAGCCTGCTGATGGACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSTIVMAACWPLQMSGTQKAVLISLADQANDQGVCWPAVETIAERTCASARAVQEALKWLEEHGAITRERRSQRSTMYTV
TPSAFTGKASKPSHYVYRIEHKPSGRFYIGLRSSLCLPEDDDYWGSGAAAVWIQKNKADCVRTVLAVLPTRREAAEYEVL
ETEAAIRDSLCMNRRVAAGDGGRRAAELMGADGAPADGAPAAHAPAESAPAPNAPLGADGAPVGAAGAPTNPQMARFEGA
AGAPEPSLNRNRNHQRTTNEPSPPARQAGSAGAGGEEETALQAACRTTWAAYTEAYEHRYGVKPVRNAPVNANVKTLVKR
LGHDEAPLVAAWYVASVNEAFVVKNSHSVGVLVNQAEGYRTQWARGQAVTGTAAQAADKTSANADAIEEAKRLSRERAAR
RAAQSGEGCNA

Sequences:

>Translated_411_residues
MSTIVMAACWPLQMSGTQKAVLISLADQANDQGVCWPAVETIAERTCASARAVQEALKWLEEHGAITRERRSQRSTMYTV
TPSAFTGKASKPSHYVYRIEHKPSGRFYIGLRSSLCLPEDDDYWGSGAAAVWIQKNKADCVRTVLAVLPTRREAAEYEVL
ETEAAIRDSLCMNRRVAAGDGGRRAAELMGADGAPADGAPAAHAPAESAPAPNAPLGADGAPVGAAGAPTNPQMARFEGA
AGAPEPSLNRNRNHQRTTNEPSPPARQAGSAGAGGEEETALQAACRTTWAAYTEAYEHRYGVKPVRNAPVNANVKTLVKR
LGHDEAPLVAAWYVASVNEAFVVKNSHSVGVLVNQAEGYRTQWARGQAVTGTAAQAADKTSANADAIEEAKRLSRERAAR
RAAQSGEGCNA
>Mature_410_residues
STIVMAACWPLQMSGTQKAVLISLADQANDQGVCWPAVETIAERTCASARAVQEALKWLEEHGAITRERRSQRSTMYTVT
PSAFTGKASKPSHYVYRIEHKPSGRFYIGLRSSLCLPEDDDYWGSGAAAVWIQKNKADCVRTVLAVLPTRREAAEYEVLE
TEAAIRDSLCMNRRVAAGDGGRRAAELMGADGAPADGAPAAHAPAESAPAPNAPLGADGAPVGAAGAPTNPQMARFEGAA
GAPEPSLNRNRNHQRTTNEPSPPARQAGSAGAGGEEETALQAACRTTWAAYTEAYEHRYGVKPVRNAPVNANVKTLVKRL
GHDEAPLVAAWYVASVNEAFVVKNSHSVGVLVNQAEGYRTQWARGQAVTGTAAQAADKTSANADAIEEAKRLSRERAARR
AAQSGEGCNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43557; Mature: 43426

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIVMAACWPLQMSGTQKAVLISLADQANDQGVCWPAVETIAERTCASARAVQEALKWL
CCCEEEEEECCEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EEHGAITRERRSQRSTMYTVTPSAFTGKASKPSHYVYRIEHKPSGRFYIGLRSSLCLPED
HHCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCC
DDYWGSGAAAVWIQKNKADCVRTVLAVLPTRREAAEYEVLETEAAIRDSLCMNRRVAAGD
CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCC
GGRRAAELMGADGAPADGAPAAHAPAESAPAPNAPLGADGAPVGAAGAPTNPQMARFEGA
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
AGAPEPSLNRNRNHQRTTNEPSPPARQAGSAGAGGEEETALQAACRTTWAAYTEAYEHRY
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GVKPVRNAPVNANVKTLVKRLGHDEAPLVAAWYVASVNEAFVVKNSHSVGVLVNQAEGYR
CCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHCCCEEEEECCCCEEEEEECCCCCH
TQWARGQAVTGTAAQAADKTSANADAIEEAKRLSRERAARRAAQSGEGCNA
HHHCCCCEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STIVMAACWPLQMSGTQKAVLISLADQANDQGVCWPAVETIAERTCASARAVQEALKWL
CCEEEEEECCEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EEHGAITRERRSQRSTMYTVTPSAFTGKASKPSHYVYRIEHKPSGRFYIGLRSSLCLPED
HHCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCC
DDYWGSGAAAVWIQKNKADCVRTVLAVLPTRREAAEYEVLETEAAIRDSLCMNRRVAAGD
CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCC
GGRRAAELMGADGAPADGAPAAHAPAESAPAPNAPLGADGAPVGAAGAPTNPQMARFEGA
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
AGAPEPSLNRNRNHQRTTNEPSPPARQAGSAGAGGEEETALQAACRTTWAAYTEAYEHRY
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GVKPVRNAPVNANVKTLVKRLGHDEAPLVAAWYVASVNEAFVVKNSHSVGVLVNQAEGYR
CCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHCCCEEEEECCCCEEEEEECCCCCH
TQWARGQAVTGTAAQAADKTSANADAIEEAKRLSRERAARRAAQSGEGCNA
HHHCCCCEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA