Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610375

Identifier: 120610375

GI number: 120610375

Start: 1849506

End: 1850291

Strand: Direct

Name: 120610375

Synonym: Aave_1692

Alternate gene names: NA

Gene position: 1849506-1850291 (Clockwise)

Preceding gene: 120610374

Following gene: 120610376

Centisome position: 34.55

GC content: 73.16

Gene sequence:

>786_bases
ATGCTTGACGAAGACGCACGCGACTGGCTCGCCGAAGAGCTGGGCGCCACCATGGAGCTGGCCGGCCAAGCCATTCGCCC
CGCCGCGCTGAGCCTGCTGATGGACGATCTGGCGCACCTGCCCAAGCCGGTGCTGCAGATGGCCCTGGCCCGCATCCGGG
CCGAGCACAAGGGCGCGATCCTGACAGGCACGGTGCTGCAGTACGCGGACCACGCCCTGGGCCGCCTACTGCCCGCCGAG
GCCTACGCCCTGGCCATGAATAGCCAGGACGAACGCGCCACGGTGGTATGGAACAACGAAATCGCGGAGGCCTGGGGGCT
GGCCGCGCCGCTGCTCGCCGCGGGCGACAAGTTCGGCGCGCGGCAGGCTTTCATGGAGGCGTACGCACGCATCACCGGCG
AGGCCCGGGCCACGCGCAGGCGGCCGCAGTTGCAGGTCAGCCTGGGCTACGACGCCGAGGGGCGCACCCGGGCCGTGCAG
GAAGCCATCGCCGCCGGCCGCCTGCCCGGGGGGCTGGAGACACTGCCCGACGATGTGCGCGAGCAGCTGGCCCTGCCGGC
GCCACGCGCCGCGCTCGCATTGCCAGCGCCCGACGTGCAGGCCGACAGCCCGGCGAAGGCGGAGGCGCTGGCGAAGCTGC
AGACGCTGCGCGCGCTGCTGACCCGCGGCATGCCCCGGGCCCAGCGCCTCCTCAAGGTGCGAGCGTGGCAGGACCGCCGG
CGGACCCGTGCGCTCAAGGCCGTCGCTCAGCAGCGCGTGGACGCATTCCAGGGCACCAAGCCATGA

Upstream 100 bases:

>100_bases
GCCGACAAGACCAGCGCCAACGCTGACGCCATCGAGGAGGCGAAACGCCTGTCGCGTGAGCGGGCCGCCCGTCGCGCAGC
TCAGAGCGGGGAGGGCTGCA

Downstream 100 bases:

>100_bases
TGAAGATGGAATTCACACGCGATGCTGTGCTCGCCAGGATCACCGAGGGGCCGGTGCGCACGCTCGACCTGGCCGGCTCC
CGCAACCATGAAGTGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MLDEDARDWLAEELGATMELAGQAIRPAALSLLMDDLAHLPKPVLQMALARIRAEHKGAILTGTVLQYADHALGRLLPAE
AYALAMNSQDERATVVWNNEIAEAWGLAAPLLAAGDKFGARQAFMEAYARITGEARATRRRPQLQVSLGYDAEGRTRAVQ
EAIAAGRLPGGLETLPDDVREQLALPAPRAALALPAPDVQADSPAKAEALAKLQTLRALLTRGMPRAQRLLKVRAWQDRR
RTRALKAVAQQRVDAFQGTKP

Sequences:

>Translated_261_residues
MLDEDARDWLAEELGATMELAGQAIRPAALSLLMDDLAHLPKPVLQMALARIRAEHKGAILTGTVLQYADHALGRLLPAE
AYALAMNSQDERATVVWNNEIAEAWGLAAPLLAAGDKFGARQAFMEAYARITGEARATRRRPQLQVSLGYDAEGRTRAVQ
EAIAAGRLPGGLETLPDDVREQLALPAPRAALALPAPDVQADSPAKAEALAKLQTLRALLTRGMPRAQRLLKVRAWQDRR
RTRALKAVAQQRVDAFQGTKP
>Mature_261_residues
MLDEDARDWLAEELGATMELAGQAIRPAALSLLMDDLAHLPKPVLQMALARIRAEHKGAILTGTVLQYADHALGRLLPAE
AYALAMNSQDERATVVWNNEIAEAWGLAAPLLAAGDKFGARQAFMEAYARITGEARATRRRPQLQVSLGYDAEGRTRAVQ
EAIAAGRLPGGLETLPDDVREQLALPAPRAALALPAPDVQADSPAKAEALAKLQTLRALLTRGMPRAQRLLKVRAWQDRR
RTRALKAVAQQRVDAFQGTKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28340; Mature: 28340

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDEDARDWLAEELGATMELAGQAIRPAALSLLMDDLAHLPKPVLQMALARIRAEHKGAI
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
LTGTVLQYADHALGRLLPAEAYALAMNSQDERATVVWNNEIAEAWGLAAPLLAAGDKFGA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHH
RQAFMEAYARITGEARATRRRPQLQVSLGYDAEGRTRAVQEAIAAGRLPGGLETLPDDVR
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHCCCHHHH
EQLALPAPRAALALPAPDVQADSPAKAEALAKLQTLRALLTRGMPRAQRLLKVRAWQDRR
HHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RTRALKAVAQQRVDAFQGTKP
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLDEDARDWLAEELGATMELAGQAIRPAALSLLMDDLAHLPKPVLQMALARIRAEHKGAI
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
LTGTVLQYADHALGRLLPAEAYALAMNSQDERATVVWNNEIAEAWGLAAPLLAAGDKFGA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHH
RQAFMEAYARITGEARATRRRPQLQVSLGYDAEGRTRAVQEAIAAGRLPGGLETLPDDVR
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHCCCHHHH
EQLALPAPRAALALPAPDVQADSPAKAEALAKLQTLRALLTRGMPRAQRLLKVRAWQDRR
HHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RTRALKAVAQQRVDAFQGTKP
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA