| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610313
Identifier: 120610313
GI number: 120610313
Start: 1793648
End: 1794565
Strand: Direct
Name: 120610313
Synonym: Aave_1630
Alternate gene names: NA
Gene position: 1793648-1794565 (Clockwise)
Preceding gene: 120610312
Following gene: 120610314
Centisome position: 33.51
GC content: 67.54
Gene sequence:
>918_bases ATGACCAACATCACATCCCCGCCAGCAATCGACGCGCTGCCCCCGGGGCCGCTGCCGACCGACACACCGGCGGACTTCAA CAGCAAGGGCTTTGCCACCGTGGCGGCGCAGGTCAATATGGTGCCGCAGATCAATGCGGTGGCCGCCAACGTGTTCCAGA ACGCTACGGCTGCACAGGAGCGCGCAACCGCAGCCGCCGCGTCTGCAAACACGGCCGGCACGCATGCGGCCAACGCGGCC GCCGCGCGCGCTGACGCCCAGGCTGCGCGCGACACGGCCATCGCCCAGGCAGACAACGCGAGCGCATCGGCCACGGCGGC CAGCGCATCGGCGCTGCAGGTGGACAAACGATACCTTGGGGCCAAGGCCTCCGCGCCGGCCACCGACAACCAGGGGGCGG CCCTGCAGGCCGGCACGGTGTACTACAACACCAGCACCAGCAAGGTGATGACATGGAGCGGTAGCGCATGGGTGGACGGC ATCTCCGCGGTCGCCGGCGTGTCGTCGGTCAATGGCCGGTCGGGTGCGGTCACGCTGACACCCACTGACCTTCCGACCCT GGCGCCCAAAGTGTCGCCGTCCTTCGCAGGCATCGTCTCGTACACCGGCGCGCTGCGCGGCAACGCGCTGGAGATGGGCG ACCTTGTGGTCGATTGCAACCACTCCAATTATTTTTTCCAGACCATCTTCGGCAACGCCGCGTTCAGCTTCGTCAACCCA CCGGCGTCTGGTGTGCGCGGCTCATTCGCCCTGGAGGTGGACCACCGGGGAGGCGTTATCACCTGGCCCGCGTCGGTCAA GTGGCCGGCCAACGTCGCGCCGACGCTCACCACGGGACGGGTGCACCTTTTCATGTTCACAACGCGCAACGGCGGTACGA CCTGGCGCGGCGCCGCACTGAGCAATTACCAGCCATGA
Upstream 100 bases:
>100_bases GCTACGCATCAACCACGGTGTACGGCTTCTACAAGTCGTTCGACATCGTGATTTCCTACTACGACTACTCGGACTCCGAG CTGGAGCTGGAAGGGCTCAC
Downstream 100 bases:
>100_bases TCGACATCGAGCAACTCATGTTCGCGGGCAACGCAGCACCTGGTCAAGTGGAGTTTCTCGCCTCGGCCACCTGGATCGTT CCTCCGGGGGTGGAGTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTNITSPPAIDALPPGPLPTDTPADFNSKGFATVAAQVNMVPQINAVAANVFQNATAAQERATAAAASANTAGTHAANAA AARADAQAARDTAIAQADNASASATAASASALQVDKRYLGAKASAPATDNQGAALQAGTVYYNTSTSKVMTWSGSAWVDG ISAVAGVSSVNGRSGAVTLTPTDLPTLAPKVSPSFAGIVSYTGALRGNALEMGDLVVDCNHSNYFFQTIFGNAAFSFVNP PASGVRGSFALEVDHRGGVITWPASVKWPANVAPTLTTGRVHLFMFTTRNGGTTWRGAALSNYQP
Sequences:
>Translated_305_residues MTNITSPPAIDALPPGPLPTDTPADFNSKGFATVAAQVNMVPQINAVAANVFQNATAAQERATAAAASANTAGTHAANAA AARADAQAARDTAIAQADNASASATAASASALQVDKRYLGAKASAPATDNQGAALQAGTVYYNTSTSKVMTWSGSAWVDG ISAVAGVSSVNGRSGAVTLTPTDLPTLAPKVSPSFAGIVSYTGALRGNALEMGDLVVDCNHSNYFFQTIFGNAAFSFVNP PASGVRGSFALEVDHRGGVITWPASVKWPANVAPTLTTGRVHLFMFTTRNGGTTWRGAALSNYQP >Mature_304_residues TNITSPPAIDALPPGPLPTDTPADFNSKGFATVAAQVNMVPQINAVAANVFQNATAAQERATAAAASANTAGTHAANAAA ARADAQAARDTAIAQADNASASATAASASALQVDKRYLGAKASAPATDNQGAALQAGTVYYNTSTSKVMTWSGSAWVDGI SAVAGVSSVNGRSGAVTLTPTDLPTLAPKVSPSFAGIVSYTGALRGNALEMGDLVVDCNHSNYFFQTIFGNAAFSFVNPP ASGVRGSFALEVDHRGGVITWPASVKWPANVAPTLTTGRVHLFMFTTRNGGTTWRGAALSNYQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30948; Mature: 30817
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNITSPPAIDALPPGPLPTDTPADFNSKGFATVAAQVNMVPQINAVAANVFQNATAAQE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHH RATAAAASANTAGTHAANAAAARADAQAARDTAIAQADNASASATAASASALQVDKRYLG HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHC AKASAPATDNQGAALQAGTVYYNTSTSKVMTWSGSAWVDGISAVAGVSSVNGRSGAVTLT CCCCCCCCCCCCCEEEECEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEC PTDLPTLAPKVSPSFAGIVSYTGALRGNALEMGDLVVDCNHSNYFFQTIFGNAAFSFVNP CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCEEEEECCCCEEEEEEECCEEEEECCC PASGVRGSFALEVDHRGGVITWPASVKWPANVAPTLTTGRVHLFMFTTRNGGTTWRGAAL CCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCEEECCEEEEEEEEECCCCCEEECCCC SNYQP CCCCC >Mature Secondary Structure TNITSPPAIDALPPGPLPTDTPADFNSKGFATVAAQVNMVPQINAVAANVFQNATAAQE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHH RATAAAASANTAGTHAANAAAARADAQAARDTAIAQADNASASATAASASALQVDKRYLG HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHC AKASAPATDNQGAALQAGTVYYNTSTSKVMTWSGSAWVDGISAVAGVSSVNGRSGAVTLT CCCCCCCCCCCCCEEEECEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEC PTDLPTLAPKVSPSFAGIVSYTGALRGNALEMGDLVVDCNHSNYFFQTIFGNAAFSFVNP CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCEEEEECCCCEEEEEEECCEEEEECCC PASGVRGSFALEVDHRGGVITWPASVKWPANVAPTLTTGRVHLFMFTTRNGGTTWRGAAL CCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCEEECCEEEEEEEEECCCCCEEECCCC SNYQP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA