Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610314

Identifier: 120610314

GI number: 120610314

Start: 1794562

End: 1795239

Strand: Direct

Name: 120610314

Synonym: Aave_1631

Alternate gene names: NA

Gene position: 1794562-1795239 (Clockwise)

Preceding gene: 120610313

Following gene: 120610315

Centisome position: 33.53

GC content: 67.99

Gene sequence:

>678_bases
ATGATCGACATCGAGCAACTCATGTTCGCGGGCAACGCAGCACCTGGTCAAGTGGAGTTTCTCGCCTCGGCCACCTGGAT
CGTTCCTCCGGGGGTGGAGTCGATCTCTATGGTCTGCGTGGAGACGGGCGGCTTCGGCAACGCCACCCAGGTTGTCGTCG
GTGGCGTGATCGTCTGCCGCGCGCTCAACTTCGATCGGATCGGCGACGGAGGCGGGAATGGTGGCGCAGGAGGCGGGTGG
GTGGATACGGGGACGCCCGGCGCGGACCCGTTGGCCGGGGGCGGGGGCGGTGCTGGTGGCTATACCGGCGATGGCGGCCC
CGGGGCCAGCTGGCCAAATTCTGCCGGCACGGGGTCGGGCGAGGGCAACTCTGGCGGCACCACCGGGTATGGCGGCAAAG
GCATCGGGCTCAAGGGCGTCGGCAGCGCTCCGGGGAGCGATTCGAGCGGGGTGTTCGGTGGGTCGTACGGAGGTGGCAAC
GGCGGCCCTACCAGCACCAGCAATGGGTCGAGAGGCGGCGCGCTCGCGTGGAAAAACAACGTGGCTGTGGTCCCTGGCCA
GGCCGTCACGATCACGGTATTTGTCCCGTCCGGGTCAGTGCTGCGCCAGGGTGCTGGCGCCGTGCGAATCATGTGGGGCG
GAGGCCGCTCCTATCCCAACAACGCAGGAGACATGTGA

Upstream 100 bases:

>100_bases
TCGCGCCGACGCTCACCACGGGACGGGTGCACCTTTTCATGTTCACAACGCGCAACGGCGGTACGACCTGGCGCGGCGCC
GCACTGAGCAATTACCAGCC

Downstream 100 bases:

>100_bases
TGTATTTGCACATCGAGACGGGGGCGTATCCGCTGACCGAGCAAGACGTGATCGCGCGACACCCGGAGTGCTCTTTCCCG
GTGCCGTTCTCGGCGCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIDIEQLMFAGNAAPGQVEFLASATWIVPPGVESISMVCVETGGFGNATQVVVGGVIVCRALNFDRIGDGGGNGGAGGGW
VDTGTPGADPLAGGGGGAGGYTGDGGPGASWPNSAGTGSGEGNSGGTTGYGGKGIGLKGVGSAPGSDSSGVFGGSYGGGN
GGPTSTSNGSRGGALAWKNNVAVVPGQAVTITVFVPSGSVLRQGAGAVRIMWGGGRSYPNNAGDM

Sequences:

>Translated_225_residues
MIDIEQLMFAGNAAPGQVEFLASATWIVPPGVESISMVCVETGGFGNATQVVVGGVIVCRALNFDRIGDGGGNGGAGGGW
VDTGTPGADPLAGGGGGAGGYTGDGGPGASWPNSAGTGSGEGNSGGTTGYGGKGIGLKGVGSAPGSDSSGVFGGSYGGGN
GGPTSTSNGSRGGALAWKNNVAVVPGQAVTITVFVPSGSVLRQGAGAVRIMWGGGRSYPNNAGDM
>Mature_225_residues
MIDIEQLMFAGNAAPGQVEFLASATWIVPPGVESISMVCVETGGFGNATQVVVGGVIVCRALNFDRIGDGGGNGGAGGGW
VDTGTPGADPLAGGGGGAGGYTGDGGPGASWPNSAGTGSGEGNSGGTTGYGGKGIGLKGVGSAPGSDSSGVFGGSYGGGN
GGPTSTSNGSRGGALAWKNNVAVVPGQAVTITVFVPSGSVLRQGAGAVRIMWGGGRSYPNNAGDM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21272; Mature: 21272

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDIEQLMFAGNAAPGQVEFLASATWIVPPGVESISMVCVETGGFGNATQVVVGGVIVCR
CCCHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHEEEEE
ALNFDRIGDGGGNGGAGGGWVDTGTPGADPLAGGGGGAGGYTGDGGPGASWPNSAGTGSG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EGNSGGTTGYGGKGIGLKGVGSAPGSDSSGVFGGSYGGGNGGPTSTSNGSRGGALAWKNN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
VAVVPGQAVTITVFVPSGSVLRQGAGAVRIMWGGGRSYPNNAGDM
EEEECCCEEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MIDIEQLMFAGNAAPGQVEFLASATWIVPPGVESISMVCVETGGFGNATQVVVGGVIVCR
CCCHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHEEEEE
ALNFDRIGDGGGNGGAGGGWVDTGTPGADPLAGGGGGAGGYTGDGGPGASWPNSAGTGSG
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EGNSGGTTGYGGKGIGLKGVGSAPGSDSSGVFGGSYGGGNGGPTSTSNGSRGGALAWKNN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
VAVVPGQAVTITVFVPSGSVLRQGAGAVRIMWGGGRSYPNNAGDM
EEEECCCEEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA