| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610262
Identifier: 120610262
GI number: 120610262
Start: 1739968
End: 1740990
Strand: Direct
Name: 120610262
Synonym: Aave_1577
Alternate gene names: NA
Gene position: 1739968-1740990 (Clockwise)
Preceding gene: 120610259
Following gene: 120610263
Centisome position: 32.51
GC content: 71.75
Gene sequence:
>1023_bases ATGAGCGCATGCACCCGCCAGGCACCGGCCCGAGCCTTGCCGGCGATCGGCCCGCTGCAGGCCTTCAGCGCCGGCCTGCT GCGGCTGTCCGAGCGTGCGCGCCAGGGTGCCCCGCAGGCCATGCTGCGCGACGCACTCGACATCCTGCGCACGCTGGTGC CCTTCGACATGGCGTGGTGGGGCGAGGTGTCGGCCGGCACGCCCCAGGTGGCTCCGCGCAACTGGCTGCACGGCAGCATC GGCCTCAGCCGGCAGTTCGCCCAGGAGTGGAACCAGCTGTCCATGGAGGACGAATTCGCGCAGGCATCGCTGGACAGCCT CGGGCAGGTGGTCGTGGGCAATGCCTGCAGCGGGCAGCCGCTGTCCGCTTCGCCGCGGGTGGAGGCCTTCTGCGAGCGCC ACGGTCTGTTCCACAGCATGGCCTTCACCGTGGCGCTGCCGGACAGCGGCCTGCAGTTTTTCGTCTGCGTGTACCGCAAG CCCCTGGCCCCGCCGTTCTCCGGGCAGGATGCGGCGCTGTTCGGTGAGTTCGTCCCGCACCTGCTGGACCACTGGCGGCA CATGCTCGAAACCCTGCAGAGCGTCTCCATCGCACGGGCCTGGGACAGCTACGCGCTGGCCGACATGGAGGGCCGGCTGC TCTTCCTGGGATTGCGCGTGGGCCAGGCGCTGGCGCAGGTCCATCCCGGATGGTCCGGCACGGCCCTGCCCCCCGAGTGC CATGCGGCCCTGCGGCAACTGCCCGCAAGCCTGGTGGTCGGCAGGTCGTGCCGCCTGCACCTGGAGGCCTGCGGGGCGCT GGTGTGCCTGCGCCTGCCGTCGCGGCAACGCAAATCGCCGCTCGCCCCGCGCGAGATGAGCGCCGCCATGCTGTACGCGC ATGGCCATGGCTACAAGGCCATCGCCGGCCTGCTGGGCCTCTCGCCCGCCACCGTGCGGACCTACCTGCGCAGCGCCTAT GCCGTGCTGGGCGTGCGCAACAAGGTGGAGCTGGCGGCCGCGCTGCGCGGCACGCGCCATTGA
Upstream 100 bases:
>100_bases CGAAGAGCCAGCGCCCGGACCGGATCCGGGGACCACAGATCCACCAGGAGACAGGCCCATGCATTTGCAGGCAGGGGAGG CCGCGCAGGGCGGCCCCGCC
Downstream 100 bases:
>100_bases ACGCGGGCTCGGGATTTTCCCCATCCGTCTGCATTTGCAGGGGTGTCCGCACGGGCATGGCGTCCTATCGTGCCGGCAGG CCGCGTGGCGGCCGAGACAA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; GerE Family Transcriptional Regulator; LuxR Superfamily Regulatory Protein; Transcriptional Regulator; Regulatory Protein LuxR
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSACTRQAPARALPAIGPLQAFSAGLLRLSERARQGAPQAMLRDALDILRTLVPFDMAWWGEVSAGTPQVAPRNWLHGSI GLSRQFAQEWNQLSMEDEFAQASLDSLGQVVVGNACSGQPLSASPRVEAFCERHGLFHSMAFTVALPDSGLQFFVCVYRK PLAPPFSGQDAALFGEFVPHLLDHWRHMLETLQSVSIARAWDSYALADMEGRLLFLGLRVGQALAQVHPGWSGTALPPEC HAALRQLPASLVVGRSCRLHLEACGALVCLRLPSRQRKSPLAPREMSAAMLYAHGHGYKAIAGLLGLSPATVRTYLRSAY AVLGVRNKVELAAALRGTRH
Sequences:
>Translated_340_residues MSACTRQAPARALPAIGPLQAFSAGLLRLSERARQGAPQAMLRDALDILRTLVPFDMAWWGEVSAGTPQVAPRNWLHGSI GLSRQFAQEWNQLSMEDEFAQASLDSLGQVVVGNACSGQPLSASPRVEAFCERHGLFHSMAFTVALPDSGLQFFVCVYRK PLAPPFSGQDAALFGEFVPHLLDHWRHMLETLQSVSIARAWDSYALADMEGRLLFLGLRVGQALAQVHPGWSGTALPPEC HAALRQLPASLVVGRSCRLHLEACGALVCLRLPSRQRKSPLAPREMSAAMLYAHGHGYKAIAGLLGLSPATVRTYLRSAY AVLGVRNKVELAAALRGTRH >Mature_339_residues SACTRQAPARALPAIGPLQAFSAGLLRLSERARQGAPQAMLRDALDILRTLVPFDMAWWGEVSAGTPQVAPRNWLHGSIG LSRQFAQEWNQLSMEDEFAQASLDSLGQVVVGNACSGQPLSASPRVEAFCERHGLFHSMAFTVALPDSGLQFFVCVYRKP LAPPFSGQDAALFGEFVPHLLDHWRHMLETLQSVSIARAWDSYALADMEGRLLFLGLRVGQALAQVHPGWSGTALPPECH AALRQLPASLVVGRSCRLHLEACGALVCLRLPSRQRKSPLAPREMSAAMLYAHGHGYKAIAGLLGLSPATVRTYLRSAYA VLGVRNKVELAAALRGTRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36886; Mature: 36755
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSACTRQAPARALPAIGPLQAFSAGLLRLSERARQGAPQAMLRDALDILRTLVPFDMAWW CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHC GEVSAGTPQVAPRNWLHGSIGLSRQFAQEWNQLSMEDEFAQASLDSLGQVVVGNACSGQP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCC LSASPRVEAFCERHGLFHSMAFTVALPDSGLQFFVCVYRKPLAPPFSGQDAALFGEFVPH CCCCCHHHHHHHHHCHHHHHEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LLDHWRHMLETLQSVSIARAWDSYALADMEGRLLFLGLRVGQALAQVHPGWSGTALPPEC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHH HAALRQLPASLVVGRSCRLHLEACGALVCLRLPSRQRKSPLAPREMSAAMLYAHGHGYKA HHHHHHCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHEEEECCCCHHH IAGLLGLSPATVRTYLRSAYAVLGVRNKVELAAALRGTRH HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure SACTRQAPARALPAIGPLQAFSAGLLRLSERARQGAPQAMLRDALDILRTLVPFDMAWW CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHC GEVSAGTPQVAPRNWLHGSIGLSRQFAQEWNQLSMEDEFAQASLDSLGQVVVGNACSGQP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCC LSASPRVEAFCERHGLFHSMAFTVALPDSGLQFFVCVYRKPLAPPFSGQDAALFGEFVPH CCCCCHHHHHHHHHCHHHHHEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LLDHWRHMLETLQSVSIARAWDSYALADMEGRLLFLGLRVGQALAQVHPGWSGTALPPEC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHH HAALRQLPASLVVGRSCRLHLEACGALVCLRLPSRQRKSPLAPREMSAAMLYAHGHGYKA HHHHHHCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHEEEECCCCHHH IAGLLGLSPATVRTYLRSAYAVLGVRNKVELAAALRGTRH HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA