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The map label for this gene is yggA [C]

Identifier: 120610259

GI number: 120610259

Start: 1737404

End: 1738066

Strand: Direct

Name: yggA [C]

Synonym: Aave_1574

Alternate gene names: 120610259

Gene position: 1737404-1738066 (Clockwise)

Preceding gene: 120610257

Following gene: 120610262

Centisome position: 32.46

GC content: 72.1

Gene sequence:

>663_bases
ATGTGGGCACTTCTTCCTTCCTCTTCCCTGTTCTCCGGCGGGGCCGCGTCCGCCGCCTGGCTGGCCGGCTTCACGGTCTG
CATGTCCCTGATCGTCTCCATCGGCGCGCAGAACGCCTACGTGCTGCGCCAGGCGGTCGCCGGGCGGCACGTGCGGGCCT
GCGTGGCCCTGTGCGTGCTGGCCGACGCGGCGCTGATCGGCGCCGGCGTGGCCGGCATGGCGAAGCTGCTGGAGAGCGCT
CCGGGCCTGGCGCGCGTGCTCACCCTGGGCGGCGCCGTGTTCCTGCTGGCCTATGGGCTGTTCGCATGGCACCGGGCGTT
GTTCGGTGCGGGCGCCGGCCTGCGCACGGACGGCGAGCGCACCCGCCAGGGCCTGCTGGGCGTGCTGGGCACCCTGGCCG
CGATCACGCTGCTCAACCCGCATGTGTACCTGGACACCGTGGTGCTCGTGGGCTCCATCGGCGCCCGGCAGGAGGGCTGC
CTCAAGTGGGTGTTCGTGGCCGGCGCGGCATCGGCCAGCCTGCTGTGGTTCCTGATGCTCGCCTTCGCGGGGCGGCAGCT
GCAGGGCGTGTTCGCGAAGCCGGTGGCCTGGCGCCTGCTCGATGGGCTCACGGGCGCCATCATGCTCACGCTGTCGTTCT
GGCTCTGGCAGGGACTGGAATGA

Upstream 100 bases:

>100_bases
GAGGGCCTCGAGTCCGGCGTAGTCCAGCATGAAGCAATACTTAATGAAGGTTAGAGTTTTTAAGTTTACATAATTTATAC
ACCCGCCCAGAATCGGTCGC

Downstream 100 bases:

>100_bases
AAAAGGCGCCGCGAAAGCGGCGCCTTGCACGGCGGACGGCGCGGGCGATCAGAACGCCGGCACGATCGCGCCCTGGTACT
TGTCCTGGATGAACTTCTTC

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MWALLPSSSLFSGGAASAAWLAGFTVCMSLIVSIGAQNAYVLRQAVAGRHVRACVALCVLADAALIGAGVAGMAKLLESA
PGLARVLTLGGAVFLLAYGLFAWHRALFGAGAGLRTDGERTRQGLLGVLGTLAAITLLNPHVYLDTVVLVGSIGARQEGC
LKWVFVAGAASASLLWFLMLAFAGRQLQGVFAKPVAWRLLDGLTGAIMLTLSFWLWQGLE

Sequences:

>Translated_220_residues
MWALLPSSSLFSGGAASAAWLAGFTVCMSLIVSIGAQNAYVLRQAVAGRHVRACVALCVLADAALIGAGVAGMAKLLESA
PGLARVLTLGGAVFLLAYGLFAWHRALFGAGAGLRTDGERTRQGLLGVLGTLAAITLLNPHVYLDTVVLVGSIGARQEGC
LKWVFVAGAASASLLWFLMLAFAGRQLQGVFAKPVAWRLLDGLTGAIMLTLSFWLWQGLE
>Mature_220_residues
MWALLPSSSLFSGGAASAAWLAGFTVCMSLIVSIGAQNAYVLRQAVAGRHVRACVALCVLADAALIGAGVAGMAKLLESA
PGLARVLTLGGAVFLLAYGLFAWHRALFGAGAGLRTDGERTRQGLLGVLGTLAAITLLNPHVYLDTVVLVGSIGARQEGC
LKWVFVAGAASASLLWFLMLAFAGRQLQGVFAKPVAWRLLDGLTGAIMLTLSFWLWQGLE

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=159, Percent_Identity=36.4779874213836, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22884; Mature: 22884

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWALLPSSSLFSGGAASAAWLAGFTVCMSLIVSIGAQNAYVLRQAVAGRHVRACVALCVL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHH
ADAALIGAGVAGMAKLLESAPGLARVLTLGGAVFLLAYGLFAWHRALFGAGAGLRTDGER
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TRQGLLGVLGTLAAITLLNPHVYLDTVVLVGSIGARQEGCLKWVFVAGAASASLLWFLML
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
AFAGRQLQGVFAKPVAWRLLDGLTGAIMLTLSFWLWQGLE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MWALLPSSSLFSGGAASAAWLAGFTVCMSLIVSIGAQNAYVLRQAVAGRHVRACVALCVL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHH
ADAALIGAGVAGMAKLLESAPGLARVLTLGGAVFLLAYGLFAWHRALFGAGAGLRTDGER
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
TRQGLLGVLGTLAAITLLNPHVYLDTVVLVGSIGARQEGCLKWVFVAGAASASLLWFLML
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
AFAGRQLQGVFAKPVAWRLLDGLTGAIMLTLSFWLWQGLE
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]