Click here to switch to the map view.

The map label for this gene is 120610167

Identifier: 120610167

GI number: 120610167

Start: 1637101

End: 1638975

Strand: Direct

Name: 120610167

Synonym: Aave_1480

Alternate gene names: NA

Gene position: 1637101-1638975 (Clockwise)

Preceding gene: 120610166

Following gene: 120610168

Centisome position: 30.58

GC content: 69.33

Gene sequence:

>1875_bases
ATGAATCCGCGGCTGGTCGAGTACTACAACCGGGAGCTGAGCTACCTGCGCGAACTGGGCGCGGAGTTCGCTGCCGCCTT
CCCGAAAGTCGCCGGGCGGCTGTCGCTGCGCGAGCTGGAGGTGGCCGATCCCTACGTGGAGCGGCTGCTCGAGGGCTTCA
GCTTCCTCACGGCACGCATCCAGATGAAGATGGACGCGGAGTTTCCGCGTCTCTCGCAGCGCATCCTGGAGATGGTCTGT
CCCCATTACCTGGCCCCGACGCCGTCGATGGTGGTCGTGCAGATGGAGCCCAGCGGCACGGAGGGCAGCCTGGTCGAAGG
CTACACCCTGGAGGCCGGCAGCGTGATCCGCGGGCGCAAGACCGCGGAAGACCAGACGCCGTGCGATTTCCGCACCGGAC
ATGCGGTCACGCTCTGGCCCATCGATCTGCAGCAGGCCCGCCTGGGCGGGCCGCCGCTGGACCTGCCGCTGTCGCGTTTC
GGACTGGCGGAAGAGGCTGCCGGCCATCTGCGTTTCACGCTGTCGGTGCGCGGCGCCGCGCAGTGGCGCAACCTGCGCAT
GGACCGGCTCGACCTGCACATCTCCGCGGGGGACGCCGTGGCGTCGCACCTGCAGGAGCTGATCCACGAGTCCGTCATGG
GCGTCATCGTCCACGATCCGCAGGACGCATCCAGGGTCTGGGCCCAGTTGCCGGCGGAGTCCGTGCAGCCGGAGGGGTAC
GAGCAGTCCCAGGCCCTGCTGCCCTACACCCACCGGGCATTCCAGGGGCACCGGCTGCTGCACGAGTATTTCGCCTTTCC
CGCGCGGTTCCGCTTTTTCTCGATCCGGGGGCTGCGGGAGGCGCTCGACCGCGTGCCGGGCCCGCAGGTCGGCATCACGC
TGCTGCTGCGGCGCGCGCAGCCCACGCTGGAAGCGCAGGTGGACCGCAACAAATTTCTCCTGCACTGCGTGCCGGCGATC
AATTTGTTCGAACGCCCGGCCGACCGCATCCACGTGTCCCCGGGCGTCAGCGAATACCACGTGGTGCCGGACCGGACGCG
GCCGCGCGATTTCGAGGTCTATTCGATTCTCGGCGTGACAGGCCACCGGGAGGGGCAGCTCAAGGACCAGGATTTCCTGC
CGTTCTTCGCGTCGGTGCACGGCCTGCGCGCGAGCGAACAGGCCTATTTCGCCGTGCGCAGGGAGCCGCGCCTGTTCTCG
GAGCATGCCACGCGTTTCGGGCCGCGCACCCAGTATCTGGGCAGCGAGGTTTTCATCTCGCTGGTGGACCAGAGGGCAGC
GCCGTTCGCGGACGACCTCAAGCAGCTCAGCGTGCGGACGCTGTGCACCAACCGCGACCTGCCGCTGCTCATGGGGGGCA
AGGGCGAGCAGAGCGACTTCAGCCTGGTGGAGTCCGCGCCCGTGGCCTCGGTGCGCACGGTGGCCGGCCCGACGCGGCCC
ACGGCCAGCATCGCCGAGAACGAGATGACCTGGCGGCTGATCTCGCACTTGTCCCTCAACTACCTGGCGATGAGCGACCT
GTCGGAGGAAGAGGGCGCGGCGACGCTGCGCGATCTGCTGCGGCTCTACATCGACCACGGGGACCGCGACCTGTCCGGGC
AGATCGCGGCGATCCGGTCGCTGGCGATCGCGCCGGTCACGCGCCGGCTGCCCCAGCACGGGCAACTGGTCTATGGCCGC
GGCGTGGGCATCACCCTGGGCGTGGACGAAGGGCCGCTCGCGGGCGTGAGCCCCTGGCCCCTCGCGTCGATCCTGGAGCG
CTTCTTCGCCCGCCATGTGGGTGTCAACAGCTATACCGAACTGTCGCTGCGGTCGCGGCAGCGGGGGGCGGTAGCGCGCT
GGAAGGTGCGCCCCGGCCAGAGGCCCGCGGCATGA

Upstream 100 bases:

>100_bases
GCAGGTGTCCGTGTCCGAGCAGCGGTGAGGTTGCGTGCAATGGGCCGCCCGGGGCGGGCCCGCCTGACGGCCGCGGTGCG
CGGCCTGGAGCTTTTCTGAC

Downstream 100 bases:

>100_bases
GCGACCGTGTGCCCGCGCAGGAGGACTCCGCAATGCCGGAGGCGGGACCGCGACCGGGGCAGGGGCCGGCGCCGGATGCC
GGCCTGGATGCGTCGGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Protein ImpG/VasA; Type VI Secretion

Number of amino acids: Translated: 624; Mature: 624

Protein sequence:

>624_residues
MNPRLVEYYNRELSYLRELGAEFAAAFPKVAGRLSLRELEVADPYVERLLEGFSFLTARIQMKMDAEFPRLSQRILEMVC
PHYLAPTPSMVVVQMEPSGTEGSLVEGYTLEAGSVIRGRKTAEDQTPCDFRTGHAVTLWPIDLQQARLGGPPLDLPLSRF
GLAEEAAGHLRFTLSVRGAAQWRNLRMDRLDLHISAGDAVASHLQELIHESVMGVIVHDPQDASRVWAQLPAESVQPEGY
EQSQALLPYTHRAFQGHRLLHEYFAFPARFRFFSIRGLREALDRVPGPQVGITLLLRRAQPTLEAQVDRNKFLLHCVPAI
NLFERPADRIHVSPGVSEYHVVPDRTRPRDFEVYSILGVTGHREGQLKDQDFLPFFASVHGLRASEQAYFAVRREPRLFS
EHATRFGPRTQYLGSEVFISLVDQRAAPFADDLKQLSVRTLCTNRDLPLLMGGKGEQSDFSLVESAPVASVRTVAGPTRP
TASIAENEMTWRLISHLSLNYLAMSDLSEEEGAATLRDLLRLYIDHGDRDLSGQIAAIRSLAIAPVTRRLPQHGQLVYGR
GVGITLGVDEGPLAGVSPWPLASILERFFARHVGVNSYTELSLRSRQRGAVARWKVRPGQRPAA

Sequences:

>Translated_624_residues
MNPRLVEYYNRELSYLRELGAEFAAAFPKVAGRLSLRELEVADPYVERLLEGFSFLTARIQMKMDAEFPRLSQRILEMVC
PHYLAPTPSMVVVQMEPSGTEGSLVEGYTLEAGSVIRGRKTAEDQTPCDFRTGHAVTLWPIDLQQARLGGPPLDLPLSRF
GLAEEAAGHLRFTLSVRGAAQWRNLRMDRLDLHISAGDAVASHLQELIHESVMGVIVHDPQDASRVWAQLPAESVQPEGY
EQSQALLPYTHRAFQGHRLLHEYFAFPARFRFFSIRGLREALDRVPGPQVGITLLLRRAQPTLEAQVDRNKFLLHCVPAI
NLFERPADRIHVSPGVSEYHVVPDRTRPRDFEVYSILGVTGHREGQLKDQDFLPFFASVHGLRASEQAYFAVRREPRLFS
EHATRFGPRTQYLGSEVFISLVDQRAAPFADDLKQLSVRTLCTNRDLPLLMGGKGEQSDFSLVESAPVASVRTVAGPTRP
TASIAENEMTWRLISHLSLNYLAMSDLSEEEGAATLRDLLRLYIDHGDRDLSGQIAAIRSLAIAPVTRRLPQHGQLVYGR
GVGITLGVDEGPLAGVSPWPLASILERFFARHVGVNSYTELSLRSRQRGAVARWKVRPGQRPAA
>Mature_624_residues
MNPRLVEYYNRELSYLRELGAEFAAAFPKVAGRLSLRELEVADPYVERLLEGFSFLTARIQMKMDAEFPRLSQRILEMVC
PHYLAPTPSMVVVQMEPSGTEGSLVEGYTLEAGSVIRGRKTAEDQTPCDFRTGHAVTLWPIDLQQARLGGPPLDLPLSRF
GLAEEAAGHLRFTLSVRGAAQWRNLRMDRLDLHISAGDAVASHLQELIHESVMGVIVHDPQDASRVWAQLPAESVQPEGY
EQSQALLPYTHRAFQGHRLLHEYFAFPARFRFFSIRGLREALDRVPGPQVGITLLLRRAQPTLEAQVDRNKFLLHCVPAI
NLFERPADRIHVSPGVSEYHVVPDRTRPRDFEVYSILGVTGHREGQLKDQDFLPFFASVHGLRASEQAYFAVRREPRLFS
EHATRFGPRTQYLGSEVFISLVDQRAAPFADDLKQLSVRTLCTNRDLPLLMGGKGEQSDFSLVESAPVASVRTVAGPTRP
TASIAENEMTWRLISHLSLNYLAMSDLSEEEGAATLRDLLRLYIDHGDRDLSGQIAAIRSLAIAPVTRRLPQHGQLVYGR
GVGITLGVDEGPLAGVSPWPLASILERFFARHVGVNSYTELSLRSRQRGAVARWKVRPGQRPAA

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69764; Mature: 69764

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPRLVEYYNRELSYLRELGAEFAAAFPKVAGRLSLRELEVADPYVERLLEGFSFLTARI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHE
QMKMDAEFPRLSQRILEMVCPHYLAPTPSMVVVQMEPSGTEGSLVEGYTLEAGSVIRGRK
EEEECCCCHHHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCCEEECEEECCCCEECCCC
TAEDQTPCDFRTGHAVTLWPIDLQQARLGGPPLDLPLSRFGLAEEAAGHLRFTLSVRGAA
CCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCHHHHCCHHHCCCCEEEEEEECCCH
QWRNLRMDRLDLHISAGDAVASHLQELIHESVMGVIVHDPQDASRVWAQLPAESVQPEGY
HHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHCCHHHCCCCCC
EQSQALLPYTHRAFQGHRLLHEYFAFPARFRFFSIRGLREALDRVPGPQVGITLLLRRAQ
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
PTLEAQVDRNKFLLHCVPAINLFERPADRIHVSPGVSEYHVVPDRTRPRDFEVYSILGVT
CCHHHHCCCCCEEEEEECHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCEEEEEEEECC
GHREGQLKDQDFLPFFASVHGLRASEQAYFAVRREPRLFSEHATRFGPRTQYLGSEVFIS
CCCCCCCCCCCCCHHHHHHHCCCCCCHHHEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH
LVDQRAAPFADDLKQLSVRTLCTNRDLPLLMGGKGEQSDFSLVESAPVASVRTVAGPTRP
HHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHCCCCHHHHHCCCCCCC
TASIAENEMTWRLISHLSLNYLAMSDLSEEEGAATLRDLLRLYIDHGDRDLSGQIAAIRS
CHHHHHCHHHHHHHHHCCHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LAIAPVTRRLPQHGQLVYGRGVGITLGVDEGPLAGVSPWPLASILERFFARHVGVNSYTE
HHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
LSLRSRQRGAVARWKVRPGQRPAA
HHHHHHCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MNPRLVEYYNRELSYLRELGAEFAAAFPKVAGRLSLRELEVADPYVERLLEGFSFLTARI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHE
QMKMDAEFPRLSQRILEMVCPHYLAPTPSMVVVQMEPSGTEGSLVEGYTLEAGSVIRGRK
EEEECCCCHHHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCCEEECEEECCCCEECCCC
TAEDQTPCDFRTGHAVTLWPIDLQQARLGGPPLDLPLSRFGLAEEAAGHLRFTLSVRGAA
CCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCHHHHCCHHHCCCCEEEEEEECCCH
QWRNLRMDRLDLHISAGDAVASHLQELIHESVMGVIVHDPQDASRVWAQLPAESVQPEGY
HHHHCCEEEEEEEEECCHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHCCHHHCCCCCC
EQSQALLPYTHRAFQGHRLLHEYFAFPARFRFFSIRGLREALDRVPGPQVGITLLLRRAQ
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
PTLEAQVDRNKFLLHCVPAINLFERPADRIHVSPGVSEYHVVPDRTRPRDFEVYSILGVT
CCHHHHCCCCCEEEEEECHHHHHHCCCCEEEECCCCCCEEECCCCCCCCCEEEEEEEECC
GHREGQLKDQDFLPFFASVHGLRASEQAYFAVRREPRLFSEHATRFGPRTQYLGSEVFIS
CCCCCCCCCCCCCHHHHHHHCCCCCCHHHEEEECCCHHHHHHHHHCCCHHHHHHHHHHHH
LVDQRAAPFADDLKQLSVRTLCTNRDLPLLMGGKGEQSDFSLVESAPVASVRTVAGPTRP
HHHHCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHCCCCHHHHHCCCCCCC
TASIAENEMTWRLISHLSLNYLAMSDLSEEEGAATLRDLLRLYIDHGDRDLSGQIAAIRS
CHHHHHCHHHHHHHHHCCHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LAIAPVTRRLPQHGQLVYGRGVGITLGVDEGPLAGVSPWPLASILERFFARHVGVNSYTE
HHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
LSLRSRQRGAVARWKVRPGQRPAA
HHHHHHCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA