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The map label for this gene is 120610166

Identifier: 120610166

GI number: 120610166

Start: 1636507

End: 1637028

Strand: Direct

Name: 120610166

Synonym: Aave_1479

Alternate gene names: NA

Gene position: 1636507-1637028 (Clockwise)

Preceding gene: 120610165

Following gene: 120610167

Centisome position: 30.57

GC content: 66.28

Gene sequence:

>522_bases
ATGGCGACGCAGAGCAGGGAGAAATACGGCAACGGCAAGGACCGGCTGCAGCCGGCGCTGCTGGACCGGCTGACCGACCA
CGAGCCCTCCCGCCGCACGGAGCGGGCCGAATCGGTCTATGTGACCGAGCCGCGCCTGCGGCAGGCACTGCTGCGCGATC
TCAACTGGCTGCTGAATGCGTCGGACGCGTCGTCGCACATCGATTTCGAGGGCCTGCCCCACGCCGAGCGCTCCGTGCTG
AACTTCGGCATGAAGCCGCTGGCTGGCCAGCTGCTGTCGGAGCTGGACTGGAAGGACGTGGAAGCGGCCATCCTGAAGGC
GATCCTCCAGCACGAGCCCCGCATCCTGCCCCATACCCTGAGCGTGACGCTGGCGCCTTCCAGCAAGCTGTTCAACCACC
ACAACACCCTGCAGTTCGAAATCCGGTGCCAGTTCTGGTCGTCGCCCTATCCGCTGGAGCTGCTGCTCAAGACCAGCCTC
GACCTGGAGACCGGGCAGGTGTCCGTGTCCGAGCAGCGGTGA

Upstream 100 bases:

>100_bases
ACGGGCTGGGGCCAGCGCGTGTGGGCCACGGACCAGGGCGATGCCGCGCTGCTCGACGTGCGGCGGGTGAAGCTGTCCGC
CTGAGCGGAGCGGACGGTCC

Downstream 100 bases:

>100_bases
GGTTGCGTGCAATGGGCCGCCCGGGGCGGGCCCGCCTGACGGCCGCGGTGCGCGGCCTGGAGCTTTTCTGACATGAATCC
GCGGCTGGTCGAGTACTACA

Product: hypothetical protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Cytoplasmic Protein; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; T6SS Lysozyme-Related D; Type VI Secretion System Protein ImpF; Cytoplasmic Protein SciD; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Related Family; Type VI Secretion System Lysozyme-Like Protein

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MATQSREKYGNGKDRLQPALLDRLTDHEPSRRTERAESVYVTEPRLRQALLRDLNWLLNASDASSHIDFEGLPHAERSVL
NFGMKPLAGQLLSELDWKDVEAAILKAILQHEPRILPHTLSVTLAPSSKLFNHHNTLQFEIRCQFWSSPYPLELLLKTSL
DLETGQVSVSEQR

Sequences:

>Translated_173_residues
MATQSREKYGNGKDRLQPALLDRLTDHEPSRRTERAESVYVTEPRLRQALLRDLNWLLNASDASSHIDFEGLPHAERSVL
NFGMKPLAGQLLSELDWKDVEAAILKAILQHEPRILPHTLSVTLAPSSKLFNHHNTLQFEIRCQFWSSPYPLELLLKTSL
DLETGQVSVSEQR
>Mature_172_residues
ATQSREKYGNGKDRLQPALLDRLTDHEPSRRTERAESVYVTEPRLRQALLRDLNWLLNASDASSHIDFEGLPHAERSVLN
FGMKPLAGQLLSELDWKDVEAAILKAILQHEPRILPHTLSVTLAPSSKLFNHHNTLQFEIRCQFWSSPYPLELLLKTSLD
LETGQVSVSEQR

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19748; Mature: 19616

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQSREKYGNGKDRLQPALLDRLTDHEPSRRTERAESVYVTEPRLRQALLRDLNWLLNA
CCCCCCHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCEEEECCHHHHHHHHHHHHHHHCC
SDASSHIDFEGLPHAERSVLNFGMKPLAGQLLSELDWKDVEAAILKAILQHEPRILPHTL
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEE
SVTLAPSSKLFNHHNTLQFEIRCQFWSSPYPLELLLKTSLDLETGQVSVSEQR
EEEECCCHHHHCCCCEEEEEEEEEECCCCCCHHHHEECCCCCCCCEEECCCCC
>Mature Secondary Structure 
ATQSREKYGNGKDRLQPALLDRLTDHEPSRRTERAESVYVTEPRLRQALLRDLNWLLNA
CCCCCHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCEEEECCHHHHHHHHHHHHHHHCC
SDASSHIDFEGLPHAERSVLNFGMKPLAGQLLSELDWKDVEAAILKAILQHEPRILPHTL
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEE
SVTLAPSSKLFNHHNTLQFEIRCQFWSSPYPLELLLKTSLDLETGQVSVSEQR
EEEECCCHHHHCCCCEEEEEEEEEECCCCCCHHHHEECCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA