Click here to switch to the map view.

The map label for this gene is tse [H]

Identifier: 120609497

GI number: 120609497

Start: 864975

End: 866597

Strand: Reverse

Name: tse [H]

Synonym: Aave_0803

Alternate gene names: 120609497

Gene position: 866597-864975 (Counterclockwise)

Preceding gene: 120609500

Following gene: 120609492

Centisome position: 16.19

GC content: 73.14

Gene sequence:

>1623_bases
ATGCACTACCTGCACCGGCTCAAGGTGTCCACACGTCTCGGCTGGCTCCTGGCCGCCCTTTGCCTGCTGGCTGCCGGCGT
CGGCGCCGCCGGGGTGCTGGGCATGGCCCGCTCCAACGCCGACCTGGTTTCCGTCTACCACGACCGCGTGGTACCACTGC
AGCAGATCAAGCGCGTGGCCGACGCCTACGCGGTGAGCATCGTGGACACCGCCCACAAGGTGCGCGACGGCGCGCTGACG
CCGCAGCAGGGCCTGGAGGCGGTCGATGCGGCGCGCAAGGAGGTGCGGGAACAGTGGGCCGCCTACCGGGCGGCCGGACT
GCACGCCGAGGAACGCCGCCTGATCTCGGAATTCGGGCCGCTGCAGGCGCGCGCCGACGCCGCCGTGCAGGCCCTGGAGG
AATTGCTGCGCGCCCGGGACATCCCCGGCCTGACGGCGTTCGCCGCCCGCGAGATGTATCCGGCGCTCGATCCGCTGCAG
GCAGTGCTGGCGGCGCTCACCCAGGTGCAGCTCGATACGGCGCGCAGCACCTACGAGACGGCCGAGACCCGCTACGCCAG
CACCCGCGCGGGCGTCATCGCGGCGGTGCTGGCGGGCATGGTGTTCGCCATCGGCTTCGGTGCGCTGGTCGTGCGCGGCA
TCCTGCGGGAGCTCGGCGCGGAGCCCGGCGCCGCCGCGGCCGTGGCGCGCGGCGTGGCGCAGGGCGACCTCACCATCGAG
ATTCCCGCACGCCAGGGCGACACGACGAGCCTGATGGCCCAGCTGCGGAGCATGCGCGACCAGCTCGCCGCCATGGTGGC
GGCCATCCACGAGAGCGCCGAGAGCGTGTCCTCCGCCGCGCTGCAGATCGCCCAGGGCAACAGCGATCTCTCGGCGCGTA
CCGAAGGCCAGGCGGGTGCGCTGCAGCAGACGGCGGCCTCCATGGAGCAGTTGAACGGCACCGTGCGGCAGAACGCGGGC
AATGCGCTGGAGGCCGACCGCGTGGCGCAGGCAGCGTCGCGCGTGGCCGCCCAGGGCGGCGCGGTGGTGACCGAGGTGGT
GGACACCATGCAGCAGATCCAGGACAGCAGCCGCCGCATCGCGGACATCACCGGCATCATCGACAGCATCGCCTTCCAGA
CCAACCTGCTCGCGCTCAACGCCGCGGTGGAGGCCGCCCGCGCGGGCGAACAGGGCCGGGGCTTCGCGGTGGTCGCGGGA
GAAGTGCGCCAGCTCGCCCAGCGCGCGGGCCAGGCGGCCGGCGAGATCAAGGGCCTGGTCGGCGCCAGCATGGACCGCGT
GGCCGCAGGCACCGCGCTGGTGGGCCGCGCCGGCCAGACCATGTCGAGCGTGGTGCAGTCGATCGAGGGGCTGTCGCAGC
TGGTGGGGGAAATCACCGCCGCCAGCCAGGAGCAGAGCCAGGGCGTGGGCCAGATCAACGACGCGGTGAACGACATGGAC
CGCTCCACCCAGCACAACGCGGCCCTGGTCGAGGAGATGGCCGCCGCTGCCGCGGCCCTGAGCCAGCGCGCCCGGGAACT
GGTCGGCACCGTGGCCAGCTTCCGGCTGCCGGGTGAAAGGCTGGCCGCGGCCGGCACCCTTTCCCTGGCATCCACGCCCC
GGGCGCTGCTGCAGCACGGTTGA

Upstream 100 bases:

>100_bases
AGCCGGAGCCGGGCTTTCCTAGGATCCGTGCCTGCAGGCCCTGCGGCCCGCATCCATCCACACAGATAGATCCCACACCA
TCCGCTCACGAGGGAATCCC

Downstream 100 bases:

>100_bases
GCGCGGCCCCGGCGCCCGCAGGAGGCGGCCTCAGGGCGCGGGCGCCCAGCGCTGCCGCAGGTAGGCCGCGACGGCCGCGG
CCGCGGGATCCCGCAGGAAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MHYLHRLKVSTRLGWLLAALCLLAAGVGAAGVLGMARSNADLVSVYHDRVVPLQQIKRVADAYAVSIVDTAHKVRDGALT
PQQGLEAVDAARKEVREQWAAYRAAGLHAEERRLISEFGPLQARADAAVQALEELLRARDIPGLTAFAAREMYPALDPLQ
AVLAALTQVQLDTARSTYETAETRYASTRAGVIAAVLAGMVFAIGFGALVVRGILRELGAEPGAAAAVARGVAQGDLTIE
IPARQGDTTSLMAQLRSMRDQLAAMVAAIHESAESVSSAALQIAQGNSDLSARTEGQAGALQQTAASMEQLNGTVRQNAG
NALEADRVAQAASRVAAQGGAVVTEVVDTMQQIQDSSRRIADITGIIDSIAFQTNLLALNAAVEAARAGEQGRGFAVVAG
EVRQLAQRAGQAAGEIKGLVGASMDRVAAGTALVGRAGQTMSSVVQSIEGLSQLVGEITAASQEQSQGVGQINDAVNDMD
RSTQHNAALVEEMAAAAAALSQRARELVGTVASFRLPGERLAAAGTLSLASTPRALLQHG

Sequences:

>Translated_540_residues
MHYLHRLKVSTRLGWLLAALCLLAAGVGAAGVLGMARSNADLVSVYHDRVVPLQQIKRVADAYAVSIVDTAHKVRDGALT
PQQGLEAVDAARKEVREQWAAYRAAGLHAEERRLISEFGPLQARADAAVQALEELLRARDIPGLTAFAAREMYPALDPLQ
AVLAALTQVQLDTARSTYETAETRYASTRAGVIAAVLAGMVFAIGFGALVVRGILRELGAEPGAAAAVARGVAQGDLTIE
IPARQGDTTSLMAQLRSMRDQLAAMVAAIHESAESVSSAALQIAQGNSDLSARTEGQAGALQQTAASMEQLNGTVRQNAG
NALEADRVAQAASRVAAQGGAVVTEVVDTMQQIQDSSRRIADITGIIDSIAFQTNLLALNAAVEAARAGEQGRGFAVVAG
EVRQLAQRAGQAAGEIKGLVGASMDRVAAGTALVGRAGQTMSSVVQSIEGLSQLVGEITAASQEQSQGVGQINDAVNDMD
RSTQHNAALVEEMAAAAAALSQRARELVGTVASFRLPGERLAAAGTLSLASTPRALLQHG
>Mature_540_residues
MHYLHRLKVSTRLGWLLAALCLLAAGVGAAGVLGMARSNADLVSVYHDRVVPLQQIKRVADAYAVSIVDTAHKVRDGALT
PQQGLEAVDAARKEVREQWAAYRAAGLHAEERRLISEFGPLQARADAAVQALEELLRARDIPGLTAFAAREMYPALDPLQ
AVLAALTQVQLDTARSTYETAETRYASTRAGVIAAVLAGMVFAIGFGALVVRGILRELGAEPGAAAAVARGVAQGDLTIE
IPARQGDTTSLMAQLRSMRDQLAAMVAAIHESAESVSSAALQIAQGNSDLSARTEGQAGALQQTAASMEQLNGTVRQNAG
NALEADRVAQAASRVAAQGGAVVTEVVDTMQQIQDSSRRIADITGIIDSIAFQTNLLALNAAVEAARAGEQGRGFAVVAG
EVRQLAQRAGQAAGEIKGLVGASMDRVAAGTALVGRAGQTMSSVVQSIEGLSQLVGEITAASQEQSQGVGQINDAVNDMD
RSTQHNAALVEEMAAAAAALSQRARELVGTVASFRLPGERLAAAGTLSLASTPRALLQHG

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=367, Percent_Identity=45.2316076294278, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1788195, Length=308, Percent_Identity=51.9480519480519, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI2367378, Length=526, Percent_Identity=38.5931558935361, Blast_Score=252, Evalue=4e-68,
Organism=Escherichia coli, GI1788194, Length=288, Percent_Identity=48.6111111111111, Blast_Score=244, Evalue=7e-66,
Organism=Escherichia coli, GI1789453, Length=243, Percent_Identity=44.0329218106996, Blast_Score=202, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 56032; Mature: 56032

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYLHRLKVSTRLGWLLAALCLLAAGVGAAGVLGMARSNADLVSVYHDRVVPLQQIKRVA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHH
DAYAVSIVDTAHKVRDGALTPQQGLEAVDAARKEVREQWAAYRAAGLHAEERRLISEFGP
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
LQARADAAVQALEELLRARDIPGLTAFAAREMYPALDPLQAVLAALTQVQLDTARSTYET
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AETRYASTRAGVIAAVLAGMVFAIGFGALVVRGILRELGAEPGAAAAVARGVAQGDLTIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEE
IPARQGDTTSLMAQLRSMRDQLAAMVAAIHESAESVSSAALQIAQGNSDLSARTEGQAGA
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
LQQTAASMEQLNGTVRQNAGNALEADRVAQAASRVAAQGGAVVTEVVDTMQQIQDSSRRI
HHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ADITGIIDSIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRQLAQRAGQAAGEIKGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GASMDRVAAGTALVGRAGQTMSSVVQSIEGLSQLVGEITAASQEQSQGVGQINDAVNDMD
HCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHH
RSTQHNAALVEEMAAAAAALSQRARELVGTVASFRLPGERLAAAGTLSLASTPRALLQHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MHYLHRLKVSTRLGWLLAALCLLAAGVGAAGVLGMARSNADLVSVYHDRVVPLQQIKRVA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHH
DAYAVSIVDTAHKVRDGALTPQQGLEAVDAARKEVREQWAAYRAAGLHAEERRLISEFGP
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
LQARADAAVQALEELLRARDIPGLTAFAAREMYPALDPLQAVLAALTQVQLDTARSTYET
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AETRYASTRAGVIAAVLAGMVFAIGFGALVVRGILRELGAEPGAAAAVARGVAQGDLTIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEE
IPARQGDTTSLMAQLRSMRDQLAAMVAAIHESAESVSSAALQIAQGNSDLSARTEGQAGA
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
LQQTAASMEQLNGTVRQNAGNALEADRVAQAASRVAAQGGAVVTEVVDTMQQIQDSSRRI
HHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ADITGIIDSIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRQLAQRAGQAAGEIKGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
GASMDRVAAGTALVGRAGQTMSSVVQSIEGLSQLVGEITAASQEQSQGVGQINDAVNDMD
HCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHH
RSTQHNAALVEEMAAAAAALSQRARELVGTVASFRLPGERLAAAGTLSLASTPRALLQHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]