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The map label for this gene is yddW [H]

Identifier: 120609496

GI number: 120609496

Start: 863589

End: 864944

Strand: Direct

Name: yddW [H]

Synonym: Aave_0802

Alternate gene names: 120609496

Gene position: 863589-864944 (Clockwise)

Preceding gene: 120609495

Following gene: 120609498

Centisome position: 16.13

GC content: 73.23

Gene sequence:

>1356_bases
ATGCCCCGTCCCCCCGCCACGCTGTTTTCTTCCTCCCCCTCCGATCCGCGCCGCCGGCGCCTGCTCGCCCAGGCGGCCGG
GCTGTCTTCCCTGGTGGCGGCCCCGCTGTTGCTGGAAGGCTGCGGCGGAGGGGCCAGCGCTGACACAGGCGTTGGTGGGC
CGGAGCGGGCTCTCCCTCGTGCCCGGCCCCTGCGGGCCAGCTGGGTCTCCACGGTCCTGAACCTGGACTGGCCCTCCGCG
GAGTCCGTCCGGATCGCCGACGATGCGCAGCGCGCCGCCGTGCAGCAGGCGGAACTGCTGCGCATCCTCGACGAGGCGGC
GGCCACCGGCCTCAACGCGGTGATCTTCCAGGCCAAGCCGTGCGCGGATGCGCTCTACGACTCCGACCTCCTGCCCTGGT
CGCCCTACCTGACCGGCACGCTGGGCCGGCATCCCGGATTCGACCCCCTGGGCTTCGCCGTGGAGCAGGCGCATGCGCGG
GGGCTGGAACTGCACGCCTGGCTCAATCCCTACCGCGTGTCGATGGACATGGGCCCGGACACGGTGCGGATGCTGTCCGG
CATGCCCGGCGACAGCCCGCCCAGCATCTACCGCGCCCGGCCCGACTGGATCCGCACGGCCGCCCGGCGCTTCGTGCTGG
ACCCGGGGCTGCCCGAGGTGCGGGCCTGGCTGGGCAGCGTGGTGGCCGAGATCACGTCGCGCTATGCCGTCGATGCCATC
CACTTCGACGACTATTTCTATTACGAAACCGCCGATTCGCGCCTGGACGACGCACAGACCTTCGCCACCTACGGCCGCGG
CTTCGCGGACAAGGGCGACTGGCGCCGCCACAGCACCCGGCTGCTGGTGCAGGGGCTGTCGGAGCAACTGCGCGCCACCA
GCCCCGGGGTGCGCTTCGGGGTCAGCCCCGCAGGCGTCTGGCGCAACCGGGCCGACGATCCGCGCGGCTCGGACACGCAG
GCCGGGGCACCCAGCTACGACGCGGCCTTCGCCGATACGCGCCAGTGGGTGCTCGATGGCCTGGTGGACGACATCGTGCC
CCAGGTGTACTGGCCCTTCGCGCGGCAGGCGGTGGGCTACGGCACCATCGCGCGCTGGTGGGCGGACGTGGCGCTGGCCT
CGCCCGGCGTGCAGCTCCACATCGGCATGGCGCTCTACAAGGCGGGGCGGCCCACGGCCCAGGAGCCCGACTGGGGCGTG
GAGGGCGGGGTGCCGGAAATCCGCCGCCAGATCGACCTCAACGAATCCACGCCCGGCATCCACGGCAGCGTGCTGTTCCG
CCACGCCTTCCTGCGGGATCCCGCGGCCGCGGCCGTCGCGGCCTACCTGCGGCAGCGCTGGGCGCCCGCGCCCTGA

Upstream 100 bases:

>100_bases
GCGCATCCGCGGGCGCGCCGCAAGCCCGGCGGCTGACGGCCGGCGACGGGCTGCCCCTTCCGGGGCGGCAGGAATTTTCC
GTGCTGCAGAATATCGACCC

Downstream 100 bases:

>100_bases
GGCCGCCTCCTGCGGGCGCCGGGGCCGCGCTCAACCGTGCTGCAGCAGCGCCCGGGGCGTGGATGCCAGGGAAAGGGTGC
CGGCCGCGGCCAGCCTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MPRPPATLFSSSPSDPRRRRLLAQAAGLSSLVAAPLLLEGCGGGASADTGVGGPERALPRARPLRASWVSTVLNLDWPSA
ESVRIADDAQRAAVQQAELLRILDEAAATGLNAVIFQAKPCADALYDSDLLPWSPYLTGTLGRHPGFDPLGFAVEQAHAR
GLELHAWLNPYRVSMDMGPDTVRMLSGMPGDSPPSIYRARPDWIRTAARRFVLDPGLPEVRAWLGSVVAEITSRYAVDAI
HFDDYFYYETADSRLDDAQTFATYGRGFADKGDWRRHSTRLLVQGLSEQLRATSPGVRFGVSPAGVWRNRADDPRGSDTQ
AGAPSYDAAFADTRQWVLDGLVDDIVPQVYWPFARQAVGYGTIARWWADVALASPGVQLHIGMALYKAGRPTAQEPDWGV
EGGVPEIRRQIDLNESTPGIHGSVLFRHAFLRDPAAAAVAAYLRQRWAPAP

Sequences:

>Translated_451_residues
MPRPPATLFSSSPSDPRRRRLLAQAAGLSSLVAAPLLLEGCGGGASADTGVGGPERALPRARPLRASWVSTVLNLDWPSA
ESVRIADDAQRAAVQQAELLRILDEAAATGLNAVIFQAKPCADALYDSDLLPWSPYLTGTLGRHPGFDPLGFAVEQAHAR
GLELHAWLNPYRVSMDMGPDTVRMLSGMPGDSPPSIYRARPDWIRTAARRFVLDPGLPEVRAWLGSVVAEITSRYAVDAI
HFDDYFYYETADSRLDDAQTFATYGRGFADKGDWRRHSTRLLVQGLSEQLRATSPGVRFGVSPAGVWRNRADDPRGSDTQ
AGAPSYDAAFADTRQWVLDGLVDDIVPQVYWPFARQAVGYGTIARWWADVALASPGVQLHIGMALYKAGRPTAQEPDWGV
EGGVPEIRRQIDLNESTPGIHGSVLFRHAFLRDPAAAAVAAYLRQRWAPAP
>Mature_450_residues
PRPPATLFSSSPSDPRRRRLLAQAAGLSSLVAAPLLLEGCGGGASADTGVGGPERALPRARPLRASWVSTVLNLDWPSAE
SVRIADDAQRAAVQQAELLRILDEAAATGLNAVIFQAKPCADALYDSDLLPWSPYLTGTLGRHPGFDPLGFAVEQAHARG
LELHAWLNPYRVSMDMGPDTVRMLSGMPGDSPPSIYRARPDWIRTAARRFVLDPGLPEVRAWLGSVVAEITSRYAVDAIH
FDDYFYYETADSRLDDAQTFATYGRGFADKGDWRRHSTRLLVQGLSEQLRATSPGVRFGVSPAGVWRNRADDPRGSDTQA
GAPSYDAAFADTRQWVLDGLVDDIVPQVYWPFARQAVGYGTIARWWADVALASPGVQLHIGMALYKAGRPTAQEPDWGVE
GGVPEIRRQIDLNESTPGIHGSVLFRHAFLRDPAAAAVAAYLRQRWAPAP

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=398, Percent_Identity=49.2462311557789, Blast_Score=429, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 49071; Mature: 48939

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPPATLFSSSPSDPRRRRLLAQAAGLSSLVAAPLLLEGCGGGASADTGVGGPERALPR
CCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCC
ARPLRASWVSTVLNLDWPSAESVRIADDAQRAAVQQAELLRILDEAAATGLNAVIFQAKP
CCCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
CADALYDSDLLPWSPYLTGTLGRHPGFDPLGFAVEQAHARGLELHAWLNPYRVSMDMGPD
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCEEEEECCCCH
TVRMLSGMPGDSPPSIYRARPDWIRTAARRFVLDPGLPEVRAWLGSVVAEITSRYAVDAI
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEE
HFDDYFYYETADSRLDDAQTFATYGRGFADKGDWRRHSTRLLVQGLSEQLRATSPGVRFG
EECCEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEC
VSPAGVWRNRADDPRGSDTQAGAPSYDAAFADTRQWVLDGLVDDIVPQVYWPFARQAVGY
CCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTIARWWADVALASPGVQLHIGMALYKAGRPTAQEPDWGVEGGVPEIRRQIDLNESTPGI
HHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
HGSVLFRHAFLRDPAAAAVAAYLRQRWAPAP
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PRPPATLFSSSPSDPRRRRLLAQAAGLSSLVAAPLLLEGCGGGASADTGVGGPERALPR
CCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCC
ARPLRASWVSTVLNLDWPSAESVRIADDAQRAAVQQAELLRILDEAAATGLNAVIFQAKP
CCCHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
CADALYDSDLLPWSPYLTGTLGRHPGFDPLGFAVEQAHARGLELHAWLNPYRVSMDMGPD
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCEEEEECCCCH
TVRMLSGMPGDSPPSIYRARPDWIRTAARRFVLDPGLPEVRAWLGSVVAEITSRYAVDAI
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEE
HFDDYFYYETADSRLDDAQTFATYGRGFADKGDWRRHSTRLLVQGLSEQLRATSPGVRFG
EECCEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEC
VSPAGVWRNRADDPRGSDTQAGAPSYDAAFADTRQWVLDGLVDDIVPQVYWPFARQAVGY
CCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTIARWWADVALASPGVQLHIGMALYKAGRPTAQEPDWGVEGGVPEIRRQIDLNESTPGI
HHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
HGSVLFRHAFLRDPAAAAVAAYLRQRWAPAP
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]