| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609490
Identifier: 120609490
GI number: 120609490
Start: 857693
End: 858715
Strand: Direct
Name: 120609490
Synonym: Aave_0796
Alternate gene names: NA
Gene position: 857693-858715 (Clockwise)
Preceding gene: 120609489
Following gene: 120609491
Centisome position: 16.02
GC content: 74.19
Gene sequence:
>1023_bases ATGACCCATTCCATCCCGCGAGGCCCCTCCCGACCTCTTTCGCCGCAGGGCATCCGCCGGCGCGATGCCGGCCTGGCCCT GGCCGCGCTGTGCTTCGGTGCCGGCGGGCCCGCGGCGGCGCAGCAAAGCGTGCAGCGCATCCTGGTGGGCTTTCCCGCGG GGGGCTCGGTCGATGTGGTGGCGCGGCGCCTGGCCGAGAGCTGGCGCGCGCGCAGCGGCACGACCACGCTGGTCGAATCC CGCGCCGGCGCGGGCGGGCGCATCGCGCTCACGGCCCTGAAGGACGCGCCGCCCGACGGGCTCACCGTGGTGCTGAGCCC CTCGTCCATGCTCACGATCTATCCGCACGTGTACAAGCGGCTGCAGTACAGGCCCGCCACGGATTTCATCGCCGTGGCGC CGGTGGCGCTGTCCACCTGCGGTTTCATGGTGGGGCCCAAGGTGCCCGATTCGGTGAAAACGCTCAAGCAGTTCGCGGAA TGGGCCAGGGGCCGGCCCCAGCCCGAAGGCTATGCCTCTCCCGCCGCGGGCGCCATGCCGCACTTCCTCGGCAACCAGTT CGCGCGGGCCGCGGGCATCTCCCTCACGCACGTGCCCTACCGCGGCGCGGCGCCCGGCCTGCAGGATCTCATGGGCGGGC AGGTGGCCTCGGGCTGCTTCAGCGTGGGCGACTGCCTGCCGCACGTGCCCACGGGCCGCGTGCGCGTGCTCGCGGTGAGC GACAGGCAGCGGTCGCGCTTCCTGCCCGACGTGCCCACCTTCGCCGAGCAGGGCTTCGCGGGCATCCAGGGCGTGGAGAG CTACGGGATCTACCTGCCCGCCCGCGCGCCCGCGGCGGTGGCCGAGCGCTGGGCCGAGGCCGCCCGCCAGGCCGTGGGCG AGCCGGCGGTCGTGGAGGCGCTGGCCAAGCTCGGCTTCGAGCCCGCGTCCGGAACGCCCGAGGAATATGCCCGCCAGCTG GCCCAGGAGCGCGATCGCTGGGCGCCGGTGGTCGCCGCCTCGGGTTTCTCGTCGGAGGAGTAG
Upstream 100 bases:
>100_bases GCCTGGCCCGCGCGGCGCCCGGCCCCGAATGAAGATACGCCCCCGCCGGTACGGGCGACGCAGTCCGGCATGACCAGAAC CCTTCCAGGAGACAAGCACC
Downstream 100 bases:
>100_bases CGGCGAAGGGCCCGCGGCGGGCACGGAATCCGAGGAAAATCACGAACCTTTCCTCGCGATGGACCCCATGCCAACTCCTG CCGCCGAGGGCGCGAGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTHSIPRGPSRPLSPQGIRRRDAGLALAALCFGAGGPAAAQQSVQRILVGFPAGGSVDVVARRLAESWRARSGTTTLVES RAGAGGRIALTALKDAPPDGLTVVLSPSSMLTIYPHVYKRLQYRPATDFIAVAPVALSTCGFMVGPKVPDSVKTLKQFAE WARGRPQPEGYASPAAGAMPHFLGNQFARAAGISLTHVPYRGAAPGLQDLMGGQVASGCFSVGDCLPHVPTGRVRVLAVS DRQRSRFLPDVPTFAEQGFAGIQGVESYGIYLPARAPAAVAERWAEAARQAVGEPAVVEALAKLGFEPASGTPEEYARQL AQERDRWAPVVAASGFSSEE
Sequences:
>Translated_340_residues MTHSIPRGPSRPLSPQGIRRRDAGLALAALCFGAGGPAAAQQSVQRILVGFPAGGSVDVVARRLAESWRARSGTTTLVES RAGAGGRIALTALKDAPPDGLTVVLSPSSMLTIYPHVYKRLQYRPATDFIAVAPVALSTCGFMVGPKVPDSVKTLKQFAE WARGRPQPEGYASPAAGAMPHFLGNQFARAAGISLTHVPYRGAAPGLQDLMGGQVASGCFSVGDCLPHVPTGRVRVLAVS DRQRSRFLPDVPTFAEQGFAGIQGVESYGIYLPARAPAAVAERWAEAARQAVGEPAVVEALAKLGFEPASGTPEEYARQL AQERDRWAPVVAASGFSSEE >Mature_339_residues THSIPRGPSRPLSPQGIRRRDAGLALAALCFGAGGPAAAQQSVQRILVGFPAGGSVDVVARRLAESWRARSGTTTLVESR AGAGGRIALTALKDAPPDGLTVVLSPSSMLTIYPHVYKRLQYRPATDFIAVAPVALSTCGFMVGPKVPDSVKTLKQFAEW ARGRPQPEGYASPAAGAMPHFLGNQFARAAGISLTHVPYRGAAPGLQDLMGGQVASGCFSVGDCLPHVPTGRVRVLAVSD RQRSRFLPDVPTFAEQGFAGIQGVESYGIYLPARAPAAVAERWAEAARQAVGEPAVVEALAKLGFEPASGTPEEYARQLA QERDRWAPVVAASGFSSEE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35677; Mature: 35546
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSIPRGPSRPLSPQGIRRRDAGLALAALCFGAGGPAAAQQSVQRILVGFPAGGSVDVV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHH ARRLAESWRARSGTTTLVESRAGAGGRIALTALKDAPPDGLTVVLSPSSMLTIYPHVYKR HHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECHHHHHH LQYRPATDFIAVAPVALSTCGFMVGPKVPDSVKTLKQFAEWARGRPQPEGYASPAAGAMP HCCCCCCCHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH HFLGNQFARAAGISLTHVPYRGAAPGLQDLMGGQVASGCFSVGDCLPHVPTGRVRVLAVS HHHHHHHHHHHCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEC DRQRSRFLPDVPTFAEQGFAGIQGVESYGIYLPARAPAAVAERWAEAARQAVGEPAVVEA CCHHHCCCCCCCHHHHCCCHHHCCHHHCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHH LAKLGFEPASGTPEEYARQLAQERDRWAPVVAASGFSSEE HHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure THSIPRGPSRPLSPQGIRRRDAGLALAALCFGAGGPAAAQQSVQRILVGFPAGGSVDVV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHH ARRLAESWRARSGTTTLVESRAGAGGRIALTALKDAPPDGLTVVLSPSSMLTIYPHVYKR HHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECHHHHHH LQYRPATDFIAVAPVALSTCGFMVGPKVPDSVKTLKQFAEWARGRPQPEGYASPAAGAMP HCCCCCCCHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH HFLGNQFARAAGISLTHVPYRGAAPGLQDLMGGQVASGCFSVGDCLPHVPTGRVRVLAVS HHHHHHHHHHHCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEC DRQRSRFLPDVPTFAEQGFAGIQGVESYGIYLPARAPAAVAERWAEAARQAVGEPAVVEA CCHHHCCCCCCCHHHHCCCHHHCCHHHCCEEECCCCCHHHHHHHHHHHHHHCCCHHHHHH LAKLGFEPASGTPEEYARQLAQERDRWAPVVAASGFSSEE HHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]