Click here to switch to the map view.

The map label for this gene is 120609489

Identifier: 120609489

GI number: 120609489

Start: 857085

End: 857624

Strand: Direct

Name: 120609489

Synonym: Aave_0795

Alternate gene names: NA

Gene position: 857085-857624 (Clockwise)

Preceding gene: 120609483

Following gene: 120609490

Centisome position: 16.01

GC content: 75.37

Gene sequence:

>540_bases
ATGCAACAAAAAGAGCGCTCCGCAGAAACCCGCAGTCCCGGCGCGCGCGCGCCTGCGGCCGCCCGGGCGGCCGATGCGCC
CGAGGGCTCCCTGCAGCCGCTGCCCGGGCTGCGCTACGGCGTGCTCGACCAGCTCATGGGCTATGCGCTGCGCAGGGCGC
AGAACGCGCTCTACCTCGATTTCCAGCGCGCCGTGGGCGATGACGTGAGCCCGCAGCGCTTCGCCGCCCTGGTGCTGGTG
GTGGGCAATCCGGGCCTGCGCCAGGGCCTGCTGGCCGAGGCGATGGGTCTGCACCGCAGCGGCGGCATGCGCCTGGTGGA
CTGGCTGCACGCCCAGGGCTGGGTGCTTCGCGAGGCCGATCCGCAGGACCGGCGCTCCTGGCTGCTCCATCCCACCCCGC
GGGGCCGTGCCGCGCTGGAGGCGCTGTCGGCCCGCGTGCGCGCGCACGATGCCGCTCTGGTCGCATCCCTCGGGCCGGGC
GGCGAGACCCTGCATCCGCTGCTGGAGCGCCTGGCCCGCGCGGCGCCCGGCCCCGAATGA

Upstream 100 bases:

>100_bases
CGTGGGCCGCAGGGAGGCGGGGGAGGGCGAGGTCATGGCGGTGCGTTCTCCGGGTTAATGCCGCTTGACGCGGATCAATG
TGCCCCACTATTGTTGCGCC

Downstream 100 bases:

>100_bases
AGATACGCCCCCGCCGGTACGGGCGACGCAGTCCGGCATGACCAGAACCCTTCCAGGAGACAAGCACCATGACCCATTCC
ATCCCGCGAGGCCCCTCCCG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MQQKERSAETRSPGARAPAAARAADAPEGSLQPLPGLRYGVLDQLMGYALRRAQNALYLDFQRAVGDDVSPQRFAALVLV
VGNPGLRQGLLAEAMGLHRSGGMRLVDWLHAQGWVLREADPQDRRSWLLHPTPRGRAALEALSARVRAHDAALVASLGPG
GETLHPLLERLARAAPGPE

Sequences:

>Translated_179_residues
MQQKERSAETRSPGARAPAAARAADAPEGSLQPLPGLRYGVLDQLMGYALRRAQNALYLDFQRAVGDDVSPQRFAALVLV
VGNPGLRQGLLAEAMGLHRSGGMRLVDWLHAQGWVLREADPQDRRSWLLHPTPRGRAALEALSARVRAHDAALVASLGPG
GETLHPLLERLARAAPGPE
>Mature_179_residues
MQQKERSAETRSPGARAPAAARAADAPEGSLQPLPGLRYGVLDQLMGYALRRAQNALYLDFQRAVGDDVSPQRFAALVLV
VGNPGLRQGLLAEAMGLHRSGGMRLVDWLHAQGWVLREADPQDRRSWLLHPTPRGRAALEALSARVRAHDAALVASLGPG
GETLHPLLERLARAAPGPE

Specific function: May be involved in the regulation of genes for 4- hydroxybenzoyl-CoA reductase [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 19252; Mature: 19252

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQKERSAETRSPGARAPAAARAADAPEGSLQPLPGLRYGVLDQLMGYALRRAQNALYLD
CCCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
FQRAVGDDVSPQRFAALVLVVGNPGLRQGLLAEAMGLHRSGGMRLVDWLHAQGWVLREAD
EHHHHCCCCCHHHHEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEECCC
PQDRRSWLLHPTPRGRAALEALSARVRAHDAALVASLGPGGETLHPLLERLARAAPGPE
CHHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQQKERSAETRSPGARAPAAARAADAPEGSLQPLPGLRYGVLDQLMGYALRRAQNALYLD
CCCHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
FQRAVGDDVSPQRFAALVLVVGNPGLRQGLLAEAMGLHRSGGMRLVDWLHAQGWVLREAD
EHHHHCCCCCHHHHEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEECCC
PQDRRSWLLHPTPRGRAALEALSARVRAHDAALVASLGPGGETLHPLLERLARAAPGPE
CHHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9490068 [H]