| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yjgN [C]
Identifier: 120609485
GI number: 120609485
Start: 851880
End: 853121
Strand: Reverse
Name: yjgN [C]
Synonym: Aave_0791
Alternate gene names: 120609485
Gene position: 853121-851880 (Counterclockwise)
Preceding gene: 120609486
Following gene: 120609484
Centisome position: 15.94
GC content: 69.16
Gene sequence:
>1242_bases ATGGATCAACGCGTCGAGCCCCACGTGGCACGCATGGCGTCATCGTTCACGTCGCACGGCATCGAGCCGCATCCGCTGGA GTTCACCGGCAGCGGCAGGGAGTATTTCCGCGTCTGGATCGTCAACGTGCTGCTGGGCATCCTGACGCTGGGCCTCTACA CCCCCTGGGCGCGCCGCCGCACCGTGCAGTACTTCTACGGCCACACGCTCGTGGCCGGCAGCCCCCTGGAATTCACCGCG CAGCAGCGCCGCATGGTCTTCGGCTTCATCGTGCTGCTGGTGCTCACCGCCGCCTACCAGATCGCCGTGCGCACCGGGCA GGACACCGCCGTGGGCCTCTTCATCCTCGCGGGCGCGGCGCTCGCCCCGCTCATCTGGGGCAGCGCCATGCGCTTTCGCC TCGGCAACACGCGCTGGCGCGGGCTGCGGCTGCAGTTCACCGCCGGCTGGCGGCAGGTCTATGCGGCGAGCTGGCCCGTG TTCGCCATCGCCGCCCTGTGGCTGGCCGCGTTCTACGGGCTGCAGGCGCTGGCGCCGGAACCCGTGGCCGGCGCCTCCGG ACGGAAGCTGCCACAGGTCACGGGGGCCATGTGGGGGCTGCTCGCGCTGACGTTCGTGCTCACCGTGCTGTGCGCCATCC GCCTCGAATACAACTACCGCAGCATGCTGGTGCTCCATTCGCGCCTGGGCACCGAGCCCGGCCGCTGGAAGCCCGTGTAC TCGGACTTCGTGAAGGTGTGGCTCGCCACCCTGGGCGTGTTCCTGCTCACCGTGGCGGTCATGGGCGCCATCGTGGGCGC CGCCTTCGACGGATCGCTGGCGCTGCTGTCCGGCAAGACCCGGGGGATGGGGCCCTGGCTGGCCCTGCTCTTCATCGTGG GCATTGTCTTCTTCGGCTTCATGGCGCTGCTGGTCTCGGCTCCGGCGCGCGCCTACCGCGAGGCACGCATGTTCCAGATC ACCTGGAACCAGATCGGCGTGAGCCACATGGCCCGCTTCAAATGCCACCTGCGCGCGAGCCGCTTCGTCGGCCTGCGCAT CAGGAACCTGCTGCTCACCCTGCTCACGCTGGGCTTCTACCGCCCGTTCGCCCGCGTGAATGAATACCGCATGAAGCTCG AGTCCGTGACCCTGCACGTCAAGGGCGGCGTGGACCAGTTGGCGGGGCAGTTGCAGCGCCAACAGCAGAACGGCGTGGGC GACGCCCTGGCGGATGCCGCGGGGCTGGACCTGATCGGCTGA
Upstream 100 bases:
>100_bases GGGTGCCCGAAGGGCAGTGGCGCTACCTGCTGCCCTGGGAGCGCTTCTGATTCGCCCGCCGCCGCGATAAACTGCCGGGC TCTTCGAGGGAGGCACATCC
Downstream 100 bases:
>100_bases ACGGCACCCGTCCGCCATGACCTCCACCGCGGCGTCGCCACCGCTACCGGATTCCCCACCCCGCACGCCCCCCCAGCCCG TGCCCGCGCGCTGGTTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Innner Membrane Protein
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MDQRVEPHVARMASSFTSHGIEPHPLEFTGSGREYFRVWIVNVLLGILTLGLYTPWARRRTVQYFYGHTLVAGSPLEFTA QQRRMVFGFIVLLVLTAAYQIAVRTGQDTAVGLFILAGAALAPLIWGSAMRFRLGNTRWRGLRLQFTAGWRQVYAASWPV FAIAALWLAAFYGLQALAPEPVAGASGRKLPQVTGAMWGLLALTFVLTVLCAIRLEYNYRSMLVLHSRLGTEPGRWKPVY SDFVKVWLATLGVFLLTVAVMGAIVGAAFDGSLALLSGKTRGMGPWLALLFIVGIVFFGFMALLVSAPARAYREARMFQI TWNQIGVSHMARFKCHLRASRFVGLRIRNLLLTLLTLGFYRPFARVNEYRMKLESVTLHVKGGVDQLAGQLQRQQQNGVG DALADAAGLDLIG
Sequences:
>Translated_413_residues MDQRVEPHVARMASSFTSHGIEPHPLEFTGSGREYFRVWIVNVLLGILTLGLYTPWARRRTVQYFYGHTLVAGSPLEFTA QQRRMVFGFIVLLVLTAAYQIAVRTGQDTAVGLFILAGAALAPLIWGSAMRFRLGNTRWRGLRLQFTAGWRQVYAASWPV FAIAALWLAAFYGLQALAPEPVAGASGRKLPQVTGAMWGLLALTFVLTVLCAIRLEYNYRSMLVLHSRLGTEPGRWKPVY SDFVKVWLATLGVFLLTVAVMGAIVGAAFDGSLALLSGKTRGMGPWLALLFIVGIVFFGFMALLVSAPARAYREARMFQI TWNQIGVSHMARFKCHLRASRFVGLRIRNLLLTLLTLGFYRPFARVNEYRMKLESVTLHVKGGVDQLAGQLQRQQQNGVG DALADAAGLDLIG >Mature_413_residues MDQRVEPHVARMASSFTSHGIEPHPLEFTGSGREYFRVWIVNVLLGILTLGLYTPWARRRTVQYFYGHTLVAGSPLEFTA QQRRMVFGFIVLLVLTAAYQIAVRTGQDTAVGLFILAGAALAPLIWGSAMRFRLGNTRWRGLRLQFTAGWRQVYAASWPV FAIAALWLAAFYGLQALAPEPVAGASGRKLPQVTGAMWGLLALTFVLTVLCAIRLEYNYRSMLVLHSRLGTEPGRWKPVY SDFVKVWLATLGVFLLTVAVMGAIVGAAFDGSLALLSGKTRGMGPWLALLFIVGIVFFGFMALLVSAPARAYREARMFQI TWNQIGVSHMARFKCHLRASRFVGLRIRNLLLTLLTLGFYRPFARVNEYRMKLESVTLHVKGGVDQLAGQLQRQQQNGVG DALADAAGLDLIG
Specific function: Unknown
COG id: COG4269
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45726; Mature: 45726
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQRVEPHVARMASSFTSHGIEPHPLEFTGSGREYFRVWIVNVLLGILTLGLYTPWARRR CCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH TVQYFYGHTLVAGSPLEFTAQQRRMVFGFIVLLVLTAAYQIAVRTGQDTAVGLFILAGAA HHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH LAPLIWGSAMRFRLGNTRWRGLRLQFTAGWRQVYAASWPVFAIAALWLAAFYGLQALAPE HHHHHHCCHHHEECCCCEECEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC PVAGASGRKLPQVTGAMWGLLALTFVLTVLCAIRLEYNYRSMLVLHSRLGTEPGRWKPVY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHH SDFVKVWLATLGVFLLTVAVMGAIVGAAFDGSLALLSGKTRGMGPWLALLFIVGIVFFGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH MALLVSAPARAYREARMFQITWNQIGVSHMARFKCHLRASRFVGLRIRNLLLTLLTLGFY HHHHHHCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPFARVNEYRMKLESVTLHVKGGVDQLAGQLQRQQQNGVGDALADAAGLDLIG HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC >Mature Secondary Structure MDQRVEPHVARMASSFTSHGIEPHPLEFTGSGREYFRVWIVNVLLGILTLGLYTPWARRR CCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH TVQYFYGHTLVAGSPLEFTAQQRRMVFGFIVLLVLTAAYQIAVRTGQDTAVGLFILAGAA HHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHH LAPLIWGSAMRFRLGNTRWRGLRLQFTAGWRQVYAASWPVFAIAALWLAAFYGLQALAPE HHHHHHCCHHHEECCCCEECEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC PVAGASGRKLPQVTGAMWGLLALTFVLTVLCAIRLEYNYRSMLVLHSRLGTEPGRWKPVY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHH SDFVKVWLATLGVFLLTVAVMGAIVGAAFDGSLALLSGKTRGMGPWLALLFIVGIVFFGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH MALLVSAPARAYREARMFQITWNQIGVSHMARFKCHLRASRFVGLRIRNLLLTLLTLGFY HHHHHHCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPFARVNEYRMKLESVTLHVKGGVDQLAGQLQRQQQNGVGDALADAAGLDLIG HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA