| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609468
Identifier: 120609468
GI number: 120609468
Start: 831971
End: 833170
Strand: Reverse
Name: 120609468
Synonym: Aave_0774
Alternate gene names: NA
Gene position: 833170-831971 (Counterclockwise)
Preceding gene: 120609470
Following gene: 120609463
Centisome position: 15.57
GC content: 74.5
Gene sequence:
>1200_bases GTGCCGCCCCATGCCCTGCCCACGCCCGCCTCCACGCCCGCCGACCTGCCCATGACCTCCCGGATCCGACCCCTTGCCCG CACTGCGCGCCTCGCGGCCGCCGGCCTCGCAGGCGCCCTGCTCGCGGGCTGCGCCCATACCGGCGACACGCTCGGCTACT ACTGGCAATCGGTGCGCGGCCACCTGCAGATCATGCGGGCCGCGGAGCCGGTGGACGACTGGATCGCGCGGCCGGACACC GCCGCGCCATTGCGGGCCCGGCTGGAGCTCGCGCGAAAGGCCCGGGCGTTCGCGGTCACCGAACTGCACCTGCCCGACAA CGCCAGCTACCGCCGCTATGCCGACCTGGGCCGCCGCGCCGCCGTCTGGAACGTGGTGGCCGCGCCGCCCGATTCGCTCA CGCTGCACACCTGGTGCTTTCCCGTCACGGGCTGCATCGGCTACCGGGGCTATTTCGCGGAAGGCGACGCGCGCGCCGAA GCCGCGCGCCTCGCCGCCGACGGGCTGGAGACGGCCGTGTACGGCGTGCCCGCCTATTCCACGCTGGGCTACACCAACTG GCTGGGCGGGGACCCGCTGCTCAATACCTTCATCGGCTGGCCCGAAGGGGATTTCGTGCGGCTGCTGTTCCACGAACTGG CCCACCAGGTGGTGTATGCCAACGGCGACACGACGTTCAACGAATCCTTCGCCACGGCGGTGGAGCGGCTCGGCGTGGCC CGCTGGCTCGCCGAGCGGGCCACGCCGCAGGCCCGGGCCGAATACGCGCTGGGCGAGGAACGGCGCGCCGCGTTCCGGGG CCTGGCCCGCGCCACGCGCGAGCGGCTGGCGGACCTGTACGCACGGGAAGCGGGCCAGCCCGGGCTGCAGGAACACAAGC GCGAGGCGATGGAACAGTTTCGAGCCCGGTACGCCGGGCTGCGTGCCGGCTGGCTGGCGCAGGGCACGCAGCCCGCGCAG ATCGCGGGATACGACCGCTGGGTGGCCGAAGCCAACAACGCGGCCTTCGGGGCGCAGGCCGCCTATGACGAACTCGTGCC CGCCTTCGAGGCGCTGTTCCAACGCGAGGGGGGCGAGTGGCCGCGGTTCTACCGGGCCGTGCGCCGGCTGGCCGCGCTGC CGCCGGACGAGCGGCTGCGGGAGCTGCGCGCCGCGCTGCCGGCGCCCGGGGTCTCCGGCCCCCCGCGGGCCGCGGATTGA
Upstream 100 bases:
>100_bases CGCGGCGGGCGCCGGTTCGGCCGCGGGCGGCATGGGGTCATGGGGCATGGCGGCATTCTAGGAACCGGCCGCCGCTCCGT ACACTCCACCGTGCTCCTGC
Downstream 100 bases:
>100_bases AGCGGGGCTGCCGCCGCGCGGCGGCAGCCGGCGGTCAGCTCAGGGATTCGATCAGGTCGATGTACTGCTGCTTCGCGGCG TCGCCGTCCGTGCCCTTGAG
Product: putative zinc protease
Products: NA
Alternate protein names: Aminopeptidase; Aminopeptidase-Like Protein; Lipoprotein
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MPPHALPTPASTPADLPMTSRIRPLARTARLAAAGLAGALLAGCAHTGDTLGYYWQSVRGHLQIMRAAEPVDDWIARPDT AAPLRARLELARKARAFAVTELHLPDNASYRRYADLGRRAAVWNVVAAPPDSLTLHTWCFPVTGCIGYRGYFAEGDARAE AARLAADGLETAVYGVPAYSTLGYTNWLGGDPLLNTFIGWPEGDFVRLLFHELAHQVVYANGDTTFNESFATAVERLGVA RWLAERATPQARAEYALGEERRAAFRGLARATRERLADLYAREAGQPGLQEHKREAMEQFRARYAGLRAGWLAQGTQPAQ IAGYDRWVAEANNAAFGAQAAYDELVPAFEALFQREGGEWPRFYRAVRRLAALPPDERLRELRAALPAPGVSGPPRAAD
Sequences:
>Translated_399_residues MPPHALPTPASTPADLPMTSRIRPLARTARLAAAGLAGALLAGCAHTGDTLGYYWQSVRGHLQIMRAAEPVDDWIARPDT AAPLRARLELARKARAFAVTELHLPDNASYRRYADLGRRAAVWNVVAAPPDSLTLHTWCFPVTGCIGYRGYFAEGDARAE AARLAADGLETAVYGVPAYSTLGYTNWLGGDPLLNTFIGWPEGDFVRLLFHELAHQVVYANGDTTFNESFATAVERLGVA RWLAERATPQARAEYALGEERRAAFRGLARATRERLADLYAREAGQPGLQEHKREAMEQFRARYAGLRAGWLAQGTQPAQ IAGYDRWVAEANNAAFGAQAAYDELVPAFEALFQREGGEWPRFYRAVRRLAALPPDERLRELRAALPAPGVSGPPRAAD >Mature_398_residues PPHALPTPASTPADLPMTSRIRPLARTARLAAAGLAGALLAGCAHTGDTLGYYWQSVRGHLQIMRAAEPVDDWIARPDTA APLRARLELARKARAFAVTELHLPDNASYRRYADLGRRAAVWNVVAAPPDSLTLHTWCFPVTGCIGYRGYFAEGDARAEA ARLAADGLETAVYGVPAYSTLGYTNWLGGDPLLNTFIGWPEGDFVRLLFHELAHQVVYANGDTTFNESFATAVERLGVAR WLAERATPQARAEYALGEERRAAFRGLARATRERLADLYAREAGQPGLQEHKREAMEQFRARYAGLRAGWLAQGTQPAQI AGYDRWVAEANNAAFGAQAAYDELVPAFEALFQREGGEWPRFYRAVRRLAALPPDERLRELRAALPAPGVSGPPRAAD
Specific function: Unknown
COG id: COG4324
COG function: function code R; Predicted aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43673; Mature: 43541
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPHALPTPASTPADLPMTSRIRPLARTARLAAAGLAGALLAGCAHTGDTLGYYWQSVRG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH HLQIMRAAEPVDDWIARPDTAAPLRARLELARKARAFAVTELHLPDNASYRRYADLGRRA HHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCHH AVWNVVAAPPDSLTLHTWCFPVTGCIGYRGYFAEGDARAEAARLAADGLETAVYGVPAYS HHHEEEECCCCCCEEEHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHH TLGYTNWLGGDPLLNTFIGWPEGDFVRLLFHELAHQVVYANGDTTFNESFATAVERLGVA HCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHH RWLAERATPQARAEYALGEERRAAFRGLARATRERLADLYAREAGQPGLQEHKREAMEQF HHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RARYAGLRAGWLAQGTQPAQIAGYDRWVAEANNAAFGAQAAYDELVPAFEALFQREGGEW HHHHHCCHHHHHCCCCCCCHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC PRFYRAVRRLAALPPDERLRELRAALPAPGVSGPPRAAD HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PPHALPTPASTPADLPMTSRIRPLARTARLAAAGLAGALLAGCAHTGDTLGYYWQSVRG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH HLQIMRAAEPVDDWIARPDTAAPLRARLELARKARAFAVTELHLPDNASYRRYADLGRRA HHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCHH AVWNVVAAPPDSLTLHTWCFPVTGCIGYRGYFAEGDARAEAARLAADGLETAVYGVPAYS HHHEEEECCCCCCEEEHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCHH TLGYTNWLGGDPLLNTFIGWPEGDFVRLLFHELAHQVVYANGDTTFNESFATAVERLGVA HCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHH RWLAERATPQARAEYALGEERRAAFRGLARATRERLADLYAREAGQPGLQEHKREAMEQF HHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH RARYAGLRAGWLAQGTQPAQIAGYDRWVAEANNAAFGAQAAYDELVPAFEALFQREGGEW HHHHHCCHHHHHCCCCCCCHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC PRFYRAVRRLAALPPDERLRELRAALPAPGVSGPPRAAD HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA