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The map label for this gene is ycaC [H]

Identifier: 120609453

GI number: 120609453

Start: 813874

End: 814551

Strand: Direct

Name: ycaC [H]

Synonym: Aave_0759

Alternate gene names: 120609453

Gene position: 813874-814551 (Clockwise)

Preceding gene: 120609452

Following gene: 120609454

Centisome position: 15.2

GC content: 68.29

Gene sequence:

>678_bases
ATGCAAAACGCCAACGCTTCCACCGCCCGTCCCGTCGCCGTCGCCCGTCCCGGGGCCCGCCTGCTCAACCCGCAGGACCA
CACGCTGATCATGATCGACTTCCAGTCGCAGATGGCCTTCGCCACGCACTCGATCGATCCGGTGCAGCTGCGCTCCAACG
CCGCGCTGGTGGCGTCGGCCGCCGCCGGCTTCGGCGCCTCGACCATCCTGACCACGGTGGCGGAAAAGAGCTTCTCGGGC
CCCATGTTCGACGAAGTGACCGCGCCGTTCCCCGGCCAGGCCCTGCTGGACCGCACGTCCATGAACACCTGGGAAGACGA
GGCCGTGATCCGCCGCGTGAACGAGATCGGCAAGCCCCGCATCGTGCTGGCCGGCCTGTGGACCAGCGTGTGCATCGTGG
GCCCGGCGCTGTCGGCGCTGGAGCAGGGCTTCGAGGTGTTCGTGATCGCCGATGCCTGCGGCGACATCTCGGTGGAGGCC
CACAACCGCGCCATGGAGCGCATGGTGCAGGCCGGCGCGCAGCCCATCACCGCGCTGCAGTATCTGCTGGAGATGCAGCG
CGACTGGGCGCGCGGCGAGACGTACGACATGACGACGGGCATCGCGAAGAAGTTCGGCGGCGGCTACGGCCTGGGGATCA
CTTACGCCAAGACCATGTTCAACGCCCACGAAGGCTGA

Upstream 100 bases:

>100_bases
GCGGCCCAACGAGCTGCCCACGATGCCCCATTGACGGGCACGTCAGGTTCTTCCGTTCTTTCGTTGATTCCGTCATCCAC
ATACGTTCCAGGAGCTTCCC

Downstream 100 bases:

>100_bases
AAAAAAGGCGCTCTGCCATCGTCAAACCCCTTGAAGGCCTGAACACCATGACCACACCCGCCACCACTGCCGACCTGATC
CTGCGCAACGGCCGCTTCAC

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MQNANASTARPVAVARPGARLLNPQDHTLIMIDFQSQMAFATHSIDPVQLRSNAALVASAAAGFGASTILTTVAEKSFSG
PMFDEVTAPFPGQALLDRTSMNTWEDEAVIRRVNEIGKPRIVLAGLWTSVCIVGPALSALEQGFEVFVIADACGDISVEA
HNRAMERMVQAGAQPITALQYLLEMQRDWARGETYDMTTGIAKKFGGGYGLGITYAKTMFNAHEG

Sequences:

>Translated_225_residues
MQNANASTARPVAVARPGARLLNPQDHTLIMIDFQSQMAFATHSIDPVQLRSNAALVASAAAGFGASTILTTVAEKSFSG
PMFDEVTAPFPGQALLDRTSMNTWEDEAVIRRVNEIGKPRIVLAGLWTSVCIVGPALSALEQGFEVFVIADACGDISVEA
HNRAMERMVQAGAQPITALQYLLEMQRDWARGETYDMTTGIAKKFGGGYGLGITYAKTMFNAHEG
>Mature_225_residues
MQNANASTARPVAVARPGARLLNPQDHTLIMIDFQSQMAFATHSIDPVQLRSNAALVASAAAGFGASTILTTVAEKSFSG
PMFDEVTAPFPGQALLDRTSMNTWEDEAVIRRVNEIGKPRIVLAGLWTSVCIVGPALSALEQGFEVFVIADACGDISVEA
HNRAMERMVQAGAQPITALQYLLEMQRDWARGETYDMTTGIAKKFGGGYGLGITYAKTMFNAHEG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=177, Percent_Identity=34.4632768361582, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24138; Mature: 24138

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNANASTARPVAVARPGARLLNPQDHTLIMIDFQSQMAFATHSIDPVQLRSNAALVASA
CCCCCCCCCCCEEEECCCHHHCCCCCCEEEEEECCCHHHHHHCCCCCEEECCCCCEEEHH
AAGFGASTILTTVAEKSFSGPMFDEVTAPFPGQALLDRTSMNTWEDEAVIRRVNEIGKPR
HCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCE
IVLAGLWTSVCIVGPALSALEQGFEVFVIADACGDISVEAHNRAMERMVQAGAQPITALQ
EEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCHHHHHH
YLLEMQRDWARGETYDMTTGIAKKFGGGYGLGITYAKTMFNAHEG
HHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MQNANASTARPVAVARPGARLLNPQDHTLIMIDFQSQMAFATHSIDPVQLRSNAALVASA
CCCCCCCCCCCEEEECCCHHHCCCCCCEEEEEECCCHHHHHHCCCCCEEECCCCCEEEHH
AAGFGASTILTTVAEKSFSGPMFDEVTAPFPGQALLDRTSMNTWEDEAVIRRVNEIGKPR
HCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCE
IVLAGLWTSVCIVGPALSALEQGFEVFVIADACGDISVEAHNRAMERMVQAGAQPITALQ
EEEHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCHHHHHH
YLLEMQRDWARGETYDMTTGIAKKFGGGYGLGITYAKTMFNAHEG
HHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]