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The map label for this gene is trbI [H]

Identifier: 120609431

GI number: 120609431

Start: 788696

End: 789835

Strand: Direct

Name: trbI [H]

Synonym: Aave_0735

Alternate gene names: 120609431

Gene position: 788696-789835 (Clockwise)

Preceding gene: 120609430

Following gene: 120609432

Centisome position: 14.73

GC content: 66.14

Gene sequence:

>1140_bases
ATGAGCCAGGACGACATTCCCGACCTTGCCACGCCGCAGGCGGACAAGGTGGCACCCGATGCGGTGGCGCTGCGCGCCCA
ACCGCGCCCGGTCACGCGCCTGAACCGGCGCACGCTGGCCATCCTCGCCGGCGGCTTGTCGGTTGGCGTGATGGGCGCGC
TGATCTGGTCTCTGCAACCGCAGCAACGCGGTGCAGGCGAATCCACTGAGCTGTACAACGTGGATCGTGTCTCGCGCTCG
GAAGGGCTGGATGCGCTGCCGGCGGACTATTCCAAGCTGCCAGTGCTGCCGCCCGACGTGCCGGAGCTGGGGCCGCCTTT
ACCGGGCGACCTGGGGCCAGCCATCGTCAATTCGCAGCAGCCGGTTGCCGCCACCTATGCCGCGCCGGGCTACGACCCTA
ACGATGCGCTACGCAAGGAAGCAGAAGCGGCTGCGGCTTCATCGGTGTTCTTCCGCACTGGTTCCACACAGGCAGCGCCC
GTGGCGCAGTCGCAGGTCGCTGCCGCACCAGGCTTCGCTGCCAACGCTGCGTTCGATCCGCTGGCCGCTGGCCCGGCCTC
GACGGCGGCCCAGCCTGCTGATCCGACTGCCGTGCAGAACCGGCAAGACCAGAAAGAGGCGTTCCTAACAGGCGGCTCTA
CGGAAACCCGTAACTCCGGCAACCTGCAAGTGCCTACCTCGCCGTATCAGGTGATGGCCGGAACGGTCATTGCCGGGGCA
CTGGTCACGGGCATCAAGTCGGATTTGCCGGGCGACGTGATCGCCATGGTGACGGAGCCGATCTATGACACGGCCACTGG
CAAGTTCCTGCTGATCCCGCAGGGATCTCGCATCCTGGGCAAGTACAACAGCCAGGTCAGCTACGGCCAGAGCCGCGTGC
AGGTGGTGTGGAACCGCATCATCCTGCCCGACACGTCATCGCTCACGCTCGACAACCTGATCGGCACCGACCCCGCAGGC
TATGCCGGTCTGGAAGACGACGTGGACTGGCATTCGGGTCGGATCTTTGCCGGTGCGGTGCTGACAACGCTGCTGGGTGT
AGGAGCTGAACTGGCCGCACCCGAGAACCGCCAGGATGGTGATCGCGTCATCATCGCCGGGCGCGACAGCCTGCAGGACA
CCGTGAACCAGGTCGGCTAG

Upstream 100 bases:

>100_bases
TGGATCGTCTGTTCGGTGCGGCAGAACTGCGCCTGGGGGCCGACAAGGGCGATGTGGTGCGCATCGAGCGCACGGATGGC
ATCGCCGGGAGGAACTGAGC

Downstream 100 bases:

>100_bases
GAAGTGACCCGGCGCAACCTCAACACCCAGCCCACGCTGACCAGCCGCCCCGGCTTGCCGGTGCGCATCATCGTGAACCG
TGATTTGGTGTTGCGGCTTT

Product: conjugation TrbI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSQDDIPDLATPQADKVAPDAVALRAQPRPVTRLNRRTLAILAGGLSVGVMGALIWSLQPQQRGAGESTELYNVDRVSRS
EGLDALPADYSKLPVLPPDVPELGPPLPGDLGPAIVNSQQPVAATYAAPGYDPNDALRKEAEAAAASSVFFRTGSTQAAP
VAQSQVAAAPGFAANAAFDPLAAGPASTAAQPADPTAVQNRQDQKEAFLTGGSTETRNSGNLQVPTSPYQVMAGTVIAGA
LVTGIKSDLPGDVIAMVTEPIYDTATGKFLLIPQGSRILGKYNSQVSYGQSRVQVVWNRIILPDTSSLTLDNLIGTDPAG
YAGLEDDVDWHSGRIFAGAVLTTLLGVGAELAAPENRQDGDRVIIAGRDSLQDTVNQVG

Sequences:

>Translated_379_residues
MSQDDIPDLATPQADKVAPDAVALRAQPRPVTRLNRRTLAILAGGLSVGVMGALIWSLQPQQRGAGESTELYNVDRVSRS
EGLDALPADYSKLPVLPPDVPELGPPLPGDLGPAIVNSQQPVAATYAAPGYDPNDALRKEAEAAAASSVFFRTGSTQAAP
VAQSQVAAAPGFAANAAFDPLAAGPASTAAQPADPTAVQNRQDQKEAFLTGGSTETRNSGNLQVPTSPYQVMAGTVIAGA
LVTGIKSDLPGDVIAMVTEPIYDTATGKFLLIPQGSRILGKYNSQVSYGQSRVQVVWNRIILPDTSSLTLDNLIGTDPAG
YAGLEDDVDWHSGRIFAGAVLTTLLGVGAELAAPENRQDGDRVIIAGRDSLQDTVNQVG
>Mature_378_residues
SQDDIPDLATPQADKVAPDAVALRAQPRPVTRLNRRTLAILAGGLSVGVMGALIWSLQPQQRGAGESTELYNVDRVSRSE
GLDALPADYSKLPVLPPDVPELGPPLPGDLGPAIVNSQQPVAATYAAPGYDPNDALRKEAEAAAASSVFFRTGSTQAAPV
AQSQVAAAPGFAANAAFDPLAAGPASTAAQPADPTAVQNRQDQKEAFLTGGSTETRNSGNLQVPTSPYQVMAGTVIAGAL
VTGIKSDLPGDVIAMVTEPIYDTATGKFLLIPQGSRILGKYNSQVSYGQSRVQVVWNRIILPDTSSLTLDNLIGTDPAGY
AGLEDDVDWHSGRIFAGAVLTTLLGVGAELAAPENRQDGDRVIIAGRDSLQDTVNQVG

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 39323; Mature: 39192

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDDIPDLATPQADKVAPDAVALRAQPRPVTRLNRRTLAILAGGLSVGVMGALIWSLQP
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCEEEEEEECCHHHHHHHHHHHHCCH
QQRGAGESTELYNVDRVSRSEGLDALPADYSKLPVLPPDVPELGPPLPGDLGPAIVNSQQ
HHCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHCCCCC
PVAATYAAPGYDPNDALRKEAEAAAASSVFFRTGSTQAAPVAQSQVAAAPGFAANAAFDP
CCEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCC
LAAGPASTAAQPADPTAVQNRQDQKEAFLTGGSTETRNSGNLQVPTSPYQVMAGTVIAGA
CCCCCCCCCCCCCCCHHHCCCCHHHHHEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHH
LVTGIKSDLPGDVIAMVTEPIYDTATGKFLLIPQGSRILGKYNSQVSYGQSRVQVVWNRI
HHHHHHHCCCCCEEEHHHCCHHHCCCCCEEEEECCCHHHHCCCCCHHHCHHHHHHHHHEE
ILPDTSSLTLDNLIGTDPAGYAGLEDDVDWHSGRIFAGAVLTTLLGVGAELAAPENRQDG
ECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCC
DRVIIAGRDSLQDTVNQVG
CEEEEECCHHHHHHHHHCC
>Mature Secondary Structure 
SQDDIPDLATPQADKVAPDAVALRAQPRPVTRLNRRTLAILAGGLSVGVMGALIWSLQP
CCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCEEEEEEECCHHHHHHHHHHHHCCH
QQRGAGESTELYNVDRVSRSEGLDALPADYSKLPVLPPDVPELGPPLPGDLGPAIVNSQQ
HHCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHCCCCC
PVAATYAAPGYDPNDALRKEAEAAAASSVFFRTGSTQAAPVAQSQVAAAPGFAANAAFDP
CCEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCC
LAAGPASTAAQPADPTAVQNRQDQKEAFLTGGSTETRNSGNLQVPTSPYQVMAGTVIAGA
CCCCCCCCCCCCCCCHHHCCCCHHHHHEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHH
LVTGIKSDLPGDVIAMVTEPIYDTATGKFLLIPQGSRILGKYNSQVSYGQSRVQVVWNRI
HHHHHHHCCCCCEEEHHHCCHHHCCCCCEEEEECCCHHHHCCCCCHHHCHHHHHHHHHEE
ILPDTSSLTLDNLIGTDPAGYAGLEDDVDWHSGRIFAGAVLTTLLGVGAELAAPENRQDG
ECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCC
DRVIIAGRDSLQDTVNQVG
CEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]