| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609432
Identifier: 120609432
GI number: 120609432
Start: 789970
End: 790215
Strand: Direct
Name: 120609432
Synonym: Aave_0736
Alternate gene names: NA
Gene position: 789970-790215 (Clockwise)
Preceding gene: 120609431
Following gene: 120609433
Centisome position: 14.76
GC content: 63.41
Gene sequence:
>246_bases ATGAGCACGACCAAGAAACTGCGGCTGGGGCCGCTGCCCAAGACCGAGAGCATGAAGCTGACCTTTGCCTGCCCGGCCAG CTTGAAAGCAGACCTCGACCGCTACGCCGCGCTGCACGCGCAGGCGTATGGCGAGGTGGTCGATGCCACGACGCTGATTC CGCACATGCTGGAGGCGTTCATGGCGGGGGATCGGGGATTCAGGAAGGGTAGTGCGGGTAAGGTCGCGCCACCAAAACCA AGCTGA
Upstream 100 bases:
>100_bases CGCTGACCAGCCGCCCCGGCTTGCCGGTGCGCATCATCGTGAACCGTGATTTGGTGTTGCGGCTTTATCAGCCGCTGTTC TTCAACAAGGGGACTTCACG
Downstream 100 bases:
>100_bases TGATCCGCAGTAACCAAGCAGGCCACCCCTTGAACGCGCAGCCGAACGCTGCGCGTTCCTCGTTCTGGGGTGCCGCGAAC GATTGGACTATGATGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSTTKKLRLGPLPKTESMKLTFACPASLKADLDRYAALHAQAYGEVVDATTLIPHMLEAFMAGDRGFRKGSAGKVAPPKP S
Sequences:
>Translated_81_residues MSTTKKLRLGPLPKTESMKLTFACPASLKADLDRYAALHAQAYGEVVDATTLIPHMLEAFMAGDRGFRKGSAGKVAPPKP S >Mature_80_residues STTKKLRLGPLPKTESMKLTFACPASLKADLDRYAALHAQAYGEVVDATTLIPHMLEAFMAGDRGFRKGSAGKVAPPKPS
Specific function: Unknown
COG id: COG5639
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8660; Mature: 8529
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTKKLRLGPLPKTESMKLTFACPASLKADLDRYAALHAQAYGEVVDATTLIPHMLEAF CCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAGDRGFRKGSAGKVAPPKPS HHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STTKKLRLGPLPKTESMKLTFACPASLKADLDRYAALHAQAYGEVVDATTLIPHMLEAF CCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAGDRGFRKGSAGKVAPPKPS HHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA