| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609378
Identifier: 120609378
GI number: 120609378
Start: 743673
End: 743987
Strand: Direct
Name: 120609378
Synonym: Aave_0681
Alternate gene names: NA
Gene position: 743673-743987 (Clockwise)
Preceding gene: 120609377
Following gene: 120609380
Centisome position: 13.89
GC content: 62.54
Gene sequence:
>315_bases ATGGCTAACATCGGCACCTTCACCGCAGACAAAGACGGCTACACCGGCCAGCTCCGCACTCTGACCCTCAATGTCAAGGT CAAGCTGGTTTCCAACGACAAGGGCGACAGCGAGAACGCCCCCGACTTCCGCGTGCAGGCGGCAGGCCACGACATCGGCG CAGCGTGGAAGAAGACCAGCGAGGCCGGACGGCCTTATGTGTCCGTGACCCTCGACGATCCTTCGTTCCCAGCAACGGTC TATGCCCGCCTGATCGAGAACGAGGACGGCATGCACGACCTCATCTGGTCGCGCAACAAGCCCAAGGCGGCCTGA
Upstream 100 bases:
>100_bases TTGCGCCCGCTGCGCGGTGCCGCCCGCCCATCCCCCGCCGGCCGGTTCACAACAAGGACGCGATGGGCGCGACCTTGTTC AACCCGAAAGGAGAAACATC
Downstream 100 bases:
>100_bases CGACCGCCCACCGCGCCCCGCCCATTGCGGCGGGGCGCCGTGCTGCTGGCGCAGCACGTCACGCACGCGCCTACGGCGCG TCGCGCTCCTTCAAGACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MANIGTFTADKDGYTGQLRTLTLNVKVKLVSNDKGDSENAPDFRVQAAGHDIGAAWKKTSEAGRPYVSVTLDDPSFPATV YARLIENEDGMHDLIWSRNKPKAA
Sequences:
>Translated_104_residues MANIGTFTADKDGYTGQLRTLTLNVKVKLVSNDKGDSENAPDFRVQAAGHDIGAAWKKTSEAGRPYVSVTLDDPSFPATV YARLIENEDGMHDLIWSRNKPKAA >Mature_103_residues ANIGTFTADKDGYTGQLRTLTLNVKVKLVSNDKGDSENAPDFRVQAAGHDIGAAWKKTSEAGRPYVSVTLDDPSFPATVY ARLIENEDGMHDLIWSRNKPKAA
Specific function: Unknown
COG id: COG5489
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007948 [H]
Pfam domain/function: PF05284 DUF736 [H]
EC number: NA
Molecular weight: Translated: 11338; Mature: 11207
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIGTFTADKDGYTGQLRTLTLNVKVKLVSNDKGDSENAPDFRVQAAGHDIGAAWKKTS CCCCCCEECCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC EAGRPYVSVTLDDPSFPATVYARLIENEDGMHDLIWSRNKPKAA CCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCC >Mature Secondary Structure ANIGTFTADKDGYTGQLRTLTLNVKVKLVSNDKGDSENAPDFRVQAAGHDIGAAWKKTS CCCCCEECCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCC EAGRPYVSVTLDDPSFPATVYARLIENEDGMHDLIWSRNKPKAA CCCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]