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The map label for this gene is yubM [H]

Identifier: 120609377

GI number: 120609377

Start: 740868

End: 742913

Strand: Direct

Name: yubM [H]

Synonym: Aave_0680

Alternate gene names: 120609377

Gene position: 740868-742913 (Clockwise)

Preceding gene: 120609376

Following gene: 120609378

Centisome position: 13.84

GC content: 67.74

Gene sequence:

>2046_bases
ATGAACGCCGTTACCAAAGCCGAAATCCATGCCATCGAAACCGCCGCGCCACTGGAAGTGGCCGACCCGACCAAGAACCT
GATTCTTGTTCCGCTGTCGCAACTGTTGCCGCGCCGTTCCAAGCGCAACGTCCGCACGACCCCGCGCCAGTCCATCCCCG
AACTGGCCGCGAGCATCGCCCGCGTCGGCCTGCTGCAAAACCTCATCGTCATCCTGTCCGCCGATGGCGAACAGTACGAA
GTGGTGGCCGGCGACCGCCGCCTGACCGCGTTGAAGCTGCTGGCGAAGAAGAAGCGCATCGCCGCCGACTATGAAGTGCC
GTGCCTGCTGGTGGCCGATGCGTCCGCCCGTACCGTGAGCCTTGCCGAGAACGTGCAGCGCGAGGCCATGCACCCCGCCG
ACCAGTTCGCGGCCTTCGCCGCGCTGGTCAAGGAAGGCCGTCCCATCGAGGACATTGCCGCCGACTTCGGCGTGTCCCCG
CTGGTGGTGCAGCGCCGCTTGAAGCTGGCGAACGTGTCGCCGCGCCTGATGACGGATTACCGTGCCAGTGGCGTAACGCT
GGAACAGTTGATGGCCTTGACCATCACCGACGACCACGCCGCGCAGGAAGCCGCGTTTTACGGTGCGCCGGAATGGCAGC
GCGGCGCATCCGCGCTGCGCGACCGCCTGACCGAGCGTGAAATCACCGCCACGCATCCGCTGGTGCGCTTCGTCGGGCTC
GACGCCTACACGGCAGCAGGCGGCGGCATCCGCCGCGACCTGTTCGCCGAAGGCGAAGCCGGAACCTATCTGACCGATGC
GGCGCTGCTGGAAACGCTGGTGCGCGGCAAGCTGGACGCGCGGGCCGAGGACGTGCGCGCCGAGGGTTGGGCATGGGTGG
AAGCCGTGCCGCACATGAGCCACGCCGACCGGCAGGCGTTCCAGAACGCCCCGCGTCAGCGCCGCGAACCGACCGCCCGC
GAAGCCCGCCGCATCGCTTCGCTGCAAACCCGTCTCGACAAGATCGACGCCGAACTGGAAGACGCCTACGACGCCGAGGA
CGAGGACAAGACCGAGGCGCTGGAACCGCGCCGCGAACAGGTGGCCGGGGAACTGAAAGCCGTGGAGGATGCCTTGCAGG
GCTACGCCCCGGACGTGCGCGCCGTGGCCGGTGCCATCGTCACGCTCGACACCAGCGGCGAGGCCGTGATTCATCGCGGC
CTGCTGCGTGAAGCCGAGGCGAAGGCACTGCGCACGCTGGAAAAGCTGCGGCAGGGTTTCGGCGCAGGCGACGGCGCGAG
CGACGAGGAAGGCGACGACGCCGACGAAGCGCCCAAGACCGCGAGCCTGTCCGACCGGCTGACGCAACGGTTGAGCGCCC
ATCGCACGGCGGCGCTGCAAATCGAAGTCGCACGGCATCCGCATATCGCCTTGGCCGCGCTGGTGCATGGCATGGTGCGG
GTCGTCCTGCAGGACGGCTACCGCCGCGATGGTTTGCCGCTCGGCGTGCGTCTGGACGTGCAAGACCGGCTGGAAGGCAT
GGCCCCGGACATGCCGGAATCGCCCGCCGCCGTGGCGCTGCGCACGTTGCAGGAAGTCGCAGGCGAAGGGTTGCCCGAGG
ATAGCGCCGAACTGTTTGCCGCGTTGCAAGCGAAGTCGCAAGACGAACTGGTGCACCTGCTGGCCGTGTGCGTGGCGTCC
ACGGTGGACGTTGTGACGCCTCGCGCTTCACAGCCCCAGCCCGGCACGGAATTGGCGCAAGCCGTGGGGTTGAACATGGC
CGCGTGGTGGAAGCCGACCGCCGAAGGTTATTTCCGCCACATCGCCAAGCCCGTGATTCTGCAAGCCGTCAGCCAGTACG
CCCCGGCGCACGTCACCCGGCTGGCGAAGTTGAAGAAAGGCGACATTGCCAGCGAAGCGGAACGGCTGGCGGATGGCACA
GGCTGGATGCCTGCCGTGTTCCACATCGACCACAACACCGAGCCGGAAGGCGCACTTGCTGCGGACGAAGCGGATACGCC
GGAAGATGCCGCCGACGAAGTGGAAGCGCACGCGCTGGCCGCGTGA

Upstream 100 bases:

>100_bases
CCTGCGCCAGTTGAAAGCCTGAATCCCCACGCGGCAGGGGCAGGCAGCGGCCCTTGCCGCTTCTCTCGCTGCTGCATCCC
AACCGCTAGGAGTTATCACC

Downstream 100 bases:

>100_bases
GGCAGTCCCATCGCCCCGGTGCGCGCCGGGGCTTTCTTTCATTCGGAACCGGGCGCGGCAAGTCTGCCGCGCCCGGCTTC
AACGTCCATAGCAAAGCCGC

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 681; Mature: 681

Protein sequence:

>681_residues
MNAVTKAEIHAIETAAPLEVADPTKNLILVPLSQLLPRRSKRNVRTTPRQSIPELAASIARVGLLQNLIVILSADGEQYE
VVAGDRRLTALKLLAKKKRIAADYEVPCLLVADASARTVSLAENVQREAMHPADQFAAFAALVKEGRPIEDIAADFGVSP
LVVQRRLKLANVSPRLMTDYRASGVTLEQLMALTITDDHAAQEAAFYGAPEWQRGASALRDRLTEREITATHPLVRFVGL
DAYTAAGGGIRRDLFAEGEAGTYLTDAALLETLVRGKLDARAEDVRAEGWAWVEAVPHMSHADRQAFQNAPRQRREPTAR
EARRIASLQTRLDKIDAELEDAYDAEDEDKTEALEPRREQVAGELKAVEDALQGYAPDVRAVAGAIVTLDTSGEAVIHRG
LLREAEAKALRTLEKLRQGFGAGDGASDEEGDDADEAPKTASLSDRLTQRLSAHRTAALQIEVARHPHIALAALVHGMVR
VVLQDGYRRDGLPLGVRLDVQDRLEGMAPDMPESPAAVALRTLQEVAGEGLPEDSAELFAALQAKSQDELVHLLAVCVAS
TVDVVTPRASQPQPGTELAQAVGLNMAAWWKPTAEGYFRHIAKPVILQAVSQYAPAHVTRLAKLKKGDIASEAERLADGT
GWMPAVFHIDHNTEPEGALAADEADTPEDAADEVEAHALAA

Sequences:

>Translated_681_residues
MNAVTKAEIHAIETAAPLEVADPTKNLILVPLSQLLPRRSKRNVRTTPRQSIPELAASIARVGLLQNLIVILSADGEQYE
VVAGDRRLTALKLLAKKKRIAADYEVPCLLVADASARTVSLAENVQREAMHPADQFAAFAALVKEGRPIEDIAADFGVSP
LVVQRRLKLANVSPRLMTDYRASGVTLEQLMALTITDDHAAQEAAFYGAPEWQRGASALRDRLTEREITATHPLVRFVGL
DAYTAAGGGIRRDLFAEGEAGTYLTDAALLETLVRGKLDARAEDVRAEGWAWVEAVPHMSHADRQAFQNAPRQRREPTAR
EARRIASLQTRLDKIDAELEDAYDAEDEDKTEALEPRREQVAGELKAVEDALQGYAPDVRAVAGAIVTLDTSGEAVIHRG
LLREAEAKALRTLEKLRQGFGAGDGASDEEGDDADEAPKTASLSDRLTQRLSAHRTAALQIEVARHPHIALAALVHGMVR
VVLQDGYRRDGLPLGVRLDVQDRLEGMAPDMPESPAAVALRTLQEVAGEGLPEDSAELFAALQAKSQDELVHLLAVCVAS
TVDVVTPRASQPQPGTELAQAVGLNMAAWWKPTAEGYFRHIAKPVILQAVSQYAPAHVTRLAKLKKGDIASEAERLADGT
GWMPAVFHIDHNTEPEGALAADEADTPEDAADEVEAHALAA
>Mature_681_residues
MNAVTKAEIHAIETAAPLEVADPTKNLILVPLSQLLPRRSKRNVRTTPRQSIPELAASIARVGLLQNLIVILSADGEQYE
VVAGDRRLTALKLLAKKKRIAADYEVPCLLVADASARTVSLAENVQREAMHPADQFAAFAALVKEGRPIEDIAADFGVSP
LVVQRRLKLANVSPRLMTDYRASGVTLEQLMALTITDDHAAQEAAFYGAPEWQRGASALRDRLTEREITATHPLVRFVGL
DAYTAAGGGIRRDLFAEGEAGTYLTDAALLETLVRGKLDARAEDVRAEGWAWVEAVPHMSHADRQAFQNAPRQRREPTAR
EARRIASLQTRLDKIDAELEDAYDAEDEDKTEALEPRREQVAGELKAVEDALQGYAPDVRAVAGAIVTLDTSGEAVIHRG
LLREAEAKALRTLEKLRQGFGAGDGASDEEGDDADEAPKTASLSDRLTQRLSAHRTAALQIEVARHPHIALAALVHGMVR
VVLQDGYRRDGLPLGVRLDVQDRLEGMAPDMPESPAAVALRTLQEVAGEGLPEDSAELFAALQAKSQDELVHLLAVCVAS
TVDVVTPRASQPQPGTELAQAVGLNMAAWWKPTAEGYFRHIAKPVILQAVSQYAPAHVTRLAKLKKGDIASEAERLADGT
GWMPAVFHIDHNTEPEGALAADEADTPEDAADEVEAHALAA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 73570; Mature: 73570

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVTKAEIHAIETAAPLEVADPTKNLILVPLSQLLPRRSKRNVRTTPRQSIPELAASIA
CCCCCHHHHHHHHCCCCCEECCCCCCEEEEEHHHHCCCHHCCCCCCCCHHHHHHHHHHHH
RVGLLQNLIVILSADGEQYEVVAGDRRLTALKLLAKKKRIAADYEVPCLLVADASARTVS
HHHHHHHHHEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHH
LAENVQREAMHPADQFAAFAALVKEGRPIEDIAADFGVSPLVVQRRLKLANVSPRLMTDY
HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
RASGVTLEQLMALTITDDHAAQEAAFYGAPEWQRGASALRDRLTEREITATHPLVRFVGL
CCCCCCHHHHHHHEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAYTAAGGGIRRDLFAEGEAGTYLTDAALLETLVRGKLDARAEDVRAEGWAWVEAVPHMS
CHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHCCCCC
HADRQAFQNAPRQRREPTAREARRIASLQTRLDKIDAELEDAYDAEDEDKTEALEPRREQ
HHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHH
VAGELKAVEDALQGYAPDVRAVAGAIVTLDTSGEAVIHRGLLREAEAKALRTLEKLRQGF
HHHHHHHHHHHHHCCCCCHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAGDGASDEEGDDADEAPKTASLSDRLTQRLSAHRTAALQIEVARHPHIALAALVHGMVR
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHH
VVLQDGYRRDGLPLGVRLDVQDRLEGMAPDMPESPAAVALRTLQEVAGEGLPEDSAELFA
HHHHCCCCCCCCCEEEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
ALQAKSQDELVHLLAVCVASTVDVVTPRASQPQPGTELAQAVGLNMAAWWKPTAEGYFRH
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHCCCCCHHHHHHH
IAKPVILQAVSQYAPAHVTRLAKLKKGDIASEAERLADGTGWMPAVFHIDHNTEPEGALA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEE
ADEADTPEDAADEVEAHALAA
CCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNAVTKAEIHAIETAAPLEVADPTKNLILVPLSQLLPRRSKRNVRTTPRQSIPELAASIA
CCCCCHHHHHHHHCCCCCEECCCCCCEEEEEHHHHCCCHHCCCCCCCCHHHHHHHHHHHH
RVGLLQNLIVILSADGEQYEVVAGDRRLTALKLLAKKKRIAADYEVPCLLVADASARTVS
HHHHHHHHHEEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHH
LAENVQREAMHPADQFAAFAALVKEGRPIEDIAADFGVSPLVVQRRLKLANVSPRLMTDY
HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHH
RASGVTLEQLMALTITDDHAAQEAAFYGAPEWQRGASALRDRLTEREITATHPLVRFVGL
CCCCCCHHHHHHHEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAYTAAGGGIRRDLFAEGEAGTYLTDAALLETLVRGKLDARAEDVRAEGWAWVEAVPHMS
CHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHCCCCC
HADRQAFQNAPRQRREPTAREARRIASLQTRLDKIDAELEDAYDAEDEDKTEALEPRREQ
HHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHH
VAGELKAVEDALQGYAPDVRAVAGAIVTLDTSGEAVIHRGLLREAEAKALRTLEKLRQGF
HHHHHHHHHHHHHCCCCCHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GAGDGASDEEGDDADEAPKTASLSDRLTQRLSAHRTAALQIEVARHPHIALAALVHGMVR
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHH
VVLQDGYRRDGLPLGVRLDVQDRLEGMAPDMPESPAAVALRTLQEVAGEGLPEDSAELFA
HHHHCCCCCCCCCEEEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
ALQAKSQDELVHLLAVCVASTVDVVTPRASQPQPGTELAQAVGLNMAAWWKPTAEGYFRH
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHCCCCCHHHHHHH
IAKPVILQAVSQYAPAHVTRLAKLKKGDIASEAERLADGTGWMPAVFHIDHNTEPEGALA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEE
ADEADTPEDAADEVEAHALAA
CCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]