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The map label for this gene is yubP [H]

Identifier: 120609376

GI number: 120609376

Start: 739965

End: 740789

Strand: Direct

Name: yubP [H]

Synonym: Aave_0679

Alternate gene names: 120609376

Gene position: 739965-740789 (Clockwise)

Preceding gene: 120609375

Following gene: 120609377

Centisome position: 13.82

GC content: 63.76

Gene sequence:

>825_bases
ATGCAACTCGCATCCCGCTTCGCTTCCCGTTCGCCGGTGCTGCGTTCGGAACGTCCCTTGTCGGATGACCAAATCCGCGC
CGTAGCGCCGTCCATCTTTGCCGACGCACCGCACGAAAGCCGTTCGGAACGGTACAGCTACATCCCCACCGCCACCGTGC
TGCAAGAACTGCGCGGGGAAGGCTTCGAGCCGTTCATGGTGTGCCAGACCCGTGTGCGCCACGACGACCGCCGCGACTAC
ACCAAGCACATGATCCGGCTGCGCCACGCCAGCCAGATCAACGGCAGGGAAGCCAACGAAATCATCCTGCTGAACTCGCA
TGACGGCACGAGTAGCTACCAGATGCTTGCCGGAATGTTCCGGTTCGTTTGCAGCAATGGCCTTGTTTGCGGCGACACCG
TGGCGGACGTGCGCGTCCCTCACAAGGGCGACGTGGCCGGGCACGTTATCGAAGGAGCTTACGAAGTCTTGCACGGATTC
AACCGGGCACAGGAATCCCGCGATGCCATGCAGGCCATCACGCTGGACAGCGGGGAATCAGAAGTGTTCGCCCGCGCCGC
GCTGGCGTTGAAGTACGACGAGGCCACGCCCGCGCCCATCACCGAATCGCAAATCCTGCTGCCCCGCCGTCACGACGACA
GCCGCCGCGATCTTTGGAGCGTGTTCAACCGCACGCAGGAAAACCTCATCAAAGGCGGCCTGTCCGCCCGTACCGCGAAC
GGTCGCCGCCAGACCACGCGCCCGGTGCAAGGCATCGACAACGGTATCCGCCTCAATCGCGCCCTGTGGCTGCTGGCCGA
TGGCCTGCGCCAGTTGAAAGCCTGA

Upstream 100 bases:

>100_bases
TGCCAACCGCACAGAACAGCCGAAAGGCTGGGCTCCGAATCTAGGAATCCGGTGTGCGGCTTGAACAGCAAACCTTTCTT
ATTTGTCAGGAGAAACGACC

Downstream 100 bases:

>100_bases
ATCCCCACGCGGCAGGGGCAGGCAGCGGCCCTTGCCGCTTCTCTCGCTGCTGCATCCCAACCGCTAGGAGTTATCACCAT
GAACGCCGTTACCAAAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MQLASRFASRSPVLRSERPLSDDQIRAVAPSIFADAPHESRSERYSYIPTATVLQELRGEGFEPFMVCQTRVRHDDRRDY
TKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGHVIEGAYEVLHGF
NRAQESRDAMQAITLDSGESEVFARAALALKYDEATPAPITESQILLPRRHDDSRRDLWSVFNRTQENLIKGGLSARTAN
GRRQTTRPVQGIDNGIRLNRALWLLADGLRQLKA

Sequences:

>Translated_274_residues
MQLASRFASRSPVLRSERPLSDDQIRAVAPSIFADAPHESRSERYSYIPTATVLQELRGEGFEPFMVCQTRVRHDDRRDY
TKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGHVIEGAYEVLHGF
NRAQESRDAMQAITLDSGESEVFARAALALKYDEATPAPITESQILLPRRHDDSRRDLWSVFNRTQENLIKGGLSARTAN
GRRQTTRPVQGIDNGIRLNRALWLLADGLRQLKA
>Mature_274_residues
MQLASRFASRSPVLRSERPLSDDQIRAVAPSIFADAPHESRSERYSYIPTATVLQELRGEGFEPFMVCQTRVRHDDRRDY
TKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGHVIEGAYEVLHGF
NRAQESRDAMQAITLDSGESEVFARAALALKYDEATPAPITESQILLPRRHDDSRRDLWSVFNRTQENLIKGGLSARTAN
GRRQTTRPVQGIDNGIRLNRALWLLADGLRQLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=268, Percent_Identity=57.4626865671642, Blast_Score=318, Evalue=2e-88,
Organism=Escherichia coli, GI87081705, Length=268, Percent_Identity=57.089552238806, Blast_Score=307, Evalue=4e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 30765; Mature: 30765

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLASRFASRSPVLRSERPLSDDQIRAVAPSIFADAPHESRSERYSYIPTATVLQELRGE
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCC
GFEPFMVCQTRVRHDDRRDYTKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGMF
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCSNGLVCGDTVADVRVPHKGDVAGHVIEGAYEVLHGFNRAQESRDAMQAITLDSGES
HHHHCCCCEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
EVFARAALALKYDEATPAPITESQILLPRRHDDSRRDLWSVFNRTQENLIKGGLSARTAN
HHHHHHHHHEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
GRRQTTRPVQGIDNGIRLNRALWLLADGLRQLKA
CCHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLASRFASRSPVLRSERPLSDDQIRAVAPSIFADAPHESRSERYSYIPTATVLQELRGE
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHCC
GFEPFMVCQTRVRHDDRRDYTKHMIRLRHASQINGREANEIILLNSHDGTSSYQMLAGMF
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCSNGLVCGDTVADVRVPHKGDVAGHVIEGAYEVLHGFNRAQESRDAMQAITLDSGES
HHHHCCCCEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
EVFARAALALKYDEATPAPITESQILLPRRHDDSRRDLWSVFNRTQENLIKGGLSARTAN
HHHHHHHHHEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
GRRQTTRPVQGIDNGIRLNRALWLLADGLRQLKA
CCHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2693941; 2315017 [H]