Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 120609329

GI number: 120609329

Start: 680065

End: 681024

Strand: Reverse

Name: rsmI [H]

Synonym: Aave_0629

Alternate gene names: 120609329

Gene position: 681024-680065 (Counterclockwise)

Preceding gene: 120609333

Following gene: 120609303

Centisome position: 12.72

GC content: 73.75

Gene sequence:

>960_bases
TTGAGCGCCTCTTTCGCCTCCGCCCTGTCCGCCGCGCGCGACGCGGCCGCAGCGCAGCATTATCCGCAAGGCGCCCTGTA
CGTCGTCGCCACGCCGATCGGCAACCTCGCGGACATCACCCTGCGCGCCCTGCACGTGCTGCAACTGGCCGACGCCATCG
CCTGCGAGGACACCCGCCACACGCAGTCCCTGCTGCGCGCCTACGGCATCGACAAGACCCCGTCGCAATGGATGGCCGTG
CACCAGCACAACGAAGCCGAGGCGGCGCAGGCCGTCGTGCAGCGGCTGCAGCGCGGCGAACGCATCGCCTACGTGAGCGA
CGCCGGCACCCCGGGCGTGAGCGACCCCGGCGCCCGGCTCGTCGCTGCCGTGCAGGCGGCCGGGCTGCGCGCACTGCCGC
TGCCCGGGGCGAGCAGCGTGACGGCCGCGCTCAGCGTGGCCGGAGCCCTGGATGCCGGCGCGGCCTCGCACCGGCCGCTG
GCCGGGGGATTCCTCTTCGCCGGCTTCCTGCCCACGCGCGCCTCGGAGCGCCAGGCTGCCGTCCAGGCCCTCGCGGCCGA
ACACCGCTGCACCGTCCTGCTCGAAGCGCCCCACCGCATCGCCGACCTCGCCGCAGCGCTGGCCCCCCTGGGCGACCGGC
CTGTCACCCTGGCGCGGGAGATCACCAAGCAGTTCGAGGAAATCGCCACCCTGCCCGCCCAGGCCCTCGCTGCCTGGCTG
GGGGAAGAAGGAAGCTCGCGCACGCGCGGGGAGTTCGCCATCGTCGTGCATCCCGCGGCCTTGCCCGGGGGCGATGACCA
CCCCGCCACCGCCACCGGCCTGCGCATCCTGCGCCAATTGCTGGCCGAACTGCCCGTCAAGACCGCCGTCCGCCTGGCGG
CCGAGATCAGCGGAGCGCCGCGCAACACCCTCTACGACGCTGCGCTGGCCATGAAGAAGGAAGGCGCCGAGGACAGCTGA

Upstream 100 bases:

>100_bases
TGCGCCAGCGCCCGGTCCTCCGCGGCCATGCCCGCGGCCCGCGTCGTAGTCTTCCGCGCGGCCCCTCCCGGGCCGGCCGT
CTTTTTTTCAAGGATTCCCA

Downstream 100 bases:

>100_bases
GACCTCCAGCGCCCACCGGACGGCAGGCCTGGGCGGAGACAGCAGCTGCGTGGGGCCGGCAGGGGGCCACGCGCCAGCCC
CCGCCTCAGGCGCGGACGGT

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSASFASALSAARDAAAAQHYPQGALYVVATPIGNLADITLRALHVLQLADAIACEDTRHTQSLLRAYGIDKTPSQWMAV
HQHNEAEAAQAVVQRLQRGERIAYVSDAGTPGVSDPGARLVAAVQAAGLRALPLPGASSVTAALSVAGALDAGAASHRPL
AGGFLFAGFLPTRASERQAAVQALAAEHRCTVLLEAPHRIADLAAALAPLGDRPVTLAREITKQFEEIATLPAQALAAWL
GEEGSSRTRGEFAIVVHPAALPGGDDHPATATGLRILRQLLAELPVKTAVRLAAEISGAPRNTLYDAALAMKKEGAEDS

Sequences:

>Translated_319_residues
MSASFASALSAARDAAAAQHYPQGALYVVATPIGNLADITLRALHVLQLADAIACEDTRHTQSLLRAYGIDKTPSQWMAV
HQHNEAEAAQAVVQRLQRGERIAYVSDAGTPGVSDPGARLVAAVQAAGLRALPLPGASSVTAALSVAGALDAGAASHRPL
AGGFLFAGFLPTRASERQAAVQALAAEHRCTVLLEAPHRIADLAAALAPLGDRPVTLAREITKQFEEIATLPAQALAAWL
GEEGSSRTRGEFAIVVHPAALPGGDDHPATATGLRILRQLLAELPVKTAVRLAAEISGAPRNTLYDAALAMKKEGAEDS
>Mature_318_residues
SASFASALSAARDAAAAQHYPQGALYVVATPIGNLADITLRALHVLQLADAIACEDTRHTQSLLRAYGIDKTPSQWMAVH
QHNEAEAAQAVVQRLQRGERIAYVSDAGTPGVSDPGARLVAAVQAAGLRALPLPGASSVTAALSVAGALDAGAASHRPLA
GGFLFAGFLPTRASERQAAVQALAAEHRCTVLLEAPHRIADLAAALAPLGDRPVTLAREITKQFEEIATLPAQALAAWLG
EEGSSRTRGEFAIVVHPAALPGGDDHPATATGLRILRQLLAELPVKTAVRLAAEISGAPRNTLYDAALAMKKEGAEDS

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=294, Percent_Identity=46.2585034013605, Blast_Score=207, Evalue=7e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 33014; Mature: 32883

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASFASALSAARDAAAAQHYPQGALYVVATPIGNLADITLRALHVLQLADAIACEDTRH
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
TQSLLRAYGIDKTPSQWMAVHQHNEAEAAQAVVQRLQRGERIAYVSDAGTPGVSDPGARL
HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHH
VAAVQAAGLRALPLPGASSVTAALSVAGALDAGAASHRPLAGGFLFAGFLPTRASERQAA
HHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHH
VQALAAEHRCTVLLEAPHRIADLAAALAPLGDRPVTLAREITKQFEEIATLPAQALAAWL
HHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
GEEGSSRTRGEFAIVVHPAALPGGDDHPATATGLRILRQLLAELPVKTAVRLAAEISGAP
CCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
RNTLYDAALAMKKEGAEDS
CHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SASFASALSAARDAAAAQHYPQGALYVVATPIGNLADITLRALHVLQLADAIACEDTRH
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
TQSLLRAYGIDKTPSQWMAVHQHNEAEAAQAVVQRLQRGERIAYVSDAGTPGVSDPGARL
HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHH
VAAVQAAGLRALPLPGASSVTAALSVAGALDAGAASHRPLAGGFLFAGFLPTRASERQAA
HHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHHHH
VQALAAEHRCTVLLEAPHRIADLAAALAPLGDRPVTLAREITKQFEEIATLPAQALAAWL
HHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH
GEEGSSRTRGEFAIVVHPAALPGGDDHPATATGLRILRQLLAELPVKTAVRLAAEISGAP
CCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
RNTLYDAALAMKKEGAEDS
CHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]