| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609263
Identifier: 120609263
GI number: 120609263
Start: 608648
End: 609481
Strand: Reverse
Name: 120609263
Synonym: Aave_0562
Alternate gene names: NA
Gene position: 609481-608648 (Counterclockwise)
Preceding gene: 120609264
Following gene: 120609262
Centisome position: 11.39
GC content: 69.06
Gene sequence:
>834_bases ATGGCTGAAACCCCCAACACCCCTGCCCTGCAGCTCAACCTCGGCTCGCTGCGCAGCGCGATGTCGCTGACGCTGCACAC CCACCACGCATCCCGGATCTGGCACGGCCGCGCACCGGCGGAAGGCCGTCCGGGCATCGTCGGCCTCAATGGCTACATCG CCGTGATGAACAAGATGAAGCGCGGCGCGGAGCAGGACGATCCGTACTCGGACTGGTGGATGCTGCGCATCGAGGAGAAG CTGTCGCAGACCGACATCGCCCTGCGGCAGTTGCGCGAGCAGGTGGACCGCGCGCTCACCGGCGTACCGGCCGCGCTGTC GCTGGGCGAAAACCTCAACGTGCAGCCGATCCGCCTTCCGCTCTTCGTCAACGCGCAACTGGGCTTCATGGCCGTCTATC TCCTGGCCGACTACGACGAACTGGCGCGCAAGCTCATCCTGGCGCACCACACCGCGCTCATCGATCGCTCCACGCTGGAG CGCTGGCTCAACGAGGGTGCCCATGCGCTGCGCAGCCTGTTCTCCCTGGCGCAGCAGTACCGCTACTCCGGCTGCACCCG TGACGACTTCGCCGCGAAGAATGCCGCAGCGCGGGCGGCGCTGGAGAAGTACGGCGAACTGCCGCAGGACGTGCTCGAAG GCACCCGCCGCTCGCGCTACGCGCCGCCCATCGTCCGCCGCTCCGGCCTGGCCCGCACGACCAGCGCGCCGGCCGAGGAC ATCGAGCCTGCGGAGTCCGGCAGTGCCGCGGCGCTGGGGACAGGTGACGCTGCAGGCCACGACAGCGCGACTGCGGCGCC CGACGGCAACGATGATGAAGACACCGCGCCATGA
Upstream 100 bases:
>100_bases ACCAGATCGAATCAGGCAGCCCCGGGCTGCGGGTTGTTCACGGACAGCTTTCCCGGCCCGCGGCGACGCTGGCGGCTCGT ACATCCATTGCGAGTCATCC
Downstream 100 bases:
>100_bases CGGAGCCCACATCTTGCGCCAACCTGGGCTCGCGGCGCTTCGCGCCGCTGGAACAGGCGGACTTCCGCGGGCTGCGACAG GCCGCCTCTCTAAAAGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MAETPNTPALQLNLGSLRSAMSLTLHTHHASRIWHGRAPAEGRPGIVGLNGYIAVMNKMKRGAEQDDPYSDWWMLRIEEK LSQTDIALRQLREQVDRALTGVPAALSLGENLNVQPIRLPLFVNAQLGFMAVYLLADYDELARKLILAHHTALIDRSTLE RWLNEGAHALRSLFSLAQQYRYSGCTRDDFAAKNAAARAALEKYGELPQDVLEGTRRSRYAPPIVRRSGLARTTSAPAED IEPAESGSAAALGTGDAAGHDSATAAPDGNDDEDTAP
Sequences:
>Translated_277_residues MAETPNTPALQLNLGSLRSAMSLTLHTHHASRIWHGRAPAEGRPGIVGLNGYIAVMNKMKRGAEQDDPYSDWWMLRIEEK LSQTDIALRQLREQVDRALTGVPAALSLGENLNVQPIRLPLFVNAQLGFMAVYLLADYDELARKLILAHHTALIDRSTLE RWLNEGAHALRSLFSLAQQYRYSGCTRDDFAAKNAAARAALEKYGELPQDVLEGTRRSRYAPPIVRRSGLARTTSAPAED IEPAESGSAAALGTGDAAGHDSATAAPDGNDDEDTAP >Mature_276_residues AETPNTPALQLNLGSLRSAMSLTLHTHHASRIWHGRAPAEGRPGIVGLNGYIAVMNKMKRGAEQDDPYSDWWMLRIEEKL SQTDIALRQLREQVDRALTGVPAALSLGENLNVQPIRLPLFVNAQLGFMAVYLLADYDELARKLILAHHTALIDRSTLER WLNEGAHALRSLFSLAQQYRYSGCTRDDFAAKNAAARAALEKYGELPQDVLEGTRRSRYAPPIVRRSGLARTTSAPAEDI EPAESGSAAALGTGDAAGHDSATAAPDGNDDEDTAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30146; Mature: 30015
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETPNTPALQLNLGSLRSAMSLTLHTHHASRIWHGRAPAEGRPGIVGLNGYIAVMNKMK CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHH RGAEQDDPYSDWWMLRIEEKLSQTDIALRQLREQVDRALTGVPAALSLGENLNVQPIRLP CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEE LFVNAQLGFMAVYLLADYDELARKLILAHHTALIDRSTLERWLNEGAHALRSLFSLAQQY EEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYSGCTRDDFAAKNAAARAALEKYGELPQDVLEGTRRSRYAPPIVRRSGLARTTSAPAED HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHH IEPAESGSAAALGTGDAAGHDSATAAPDGNDDEDTAP CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AETPNTPALQLNLGSLRSAMSLTLHTHHASRIWHGRAPAEGRPGIVGLNGYIAVMNKMK CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHH RGAEQDDPYSDWWMLRIEEKLSQTDIALRQLREQVDRALTGVPAALSLGENLNVQPIRLP CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEE LFVNAQLGFMAVYLLADYDELARKLILAHHTALIDRSTLERWLNEGAHALRSLFSLAQQY EEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYSGCTRDDFAAKNAAARAALEKYGELPQDVLEGTRRSRYAPPIVRRSGLARTTSAPAED HHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHH IEPAESGSAAALGTGDAAGHDSATAAPDGNDDEDTAP CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA