| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609264
Identifier: 120609264
GI number: 120609264
Start: 609805
End: 611040
Strand: Reverse
Name: 120609264
Synonym: Aave_0563
Alternate gene names: NA
Gene position: 611040-609805 (Counterclockwise)
Preceding gene: 120609265
Following gene: 120609263
Centisome position: 11.42
GC content: 68.28
Gene sequence:
>1236_bases ATGGCAGCGCCCGGGAAGCCGCGGCCGCCCGGCCCCCGTTCGCTGTCGGACGTATTCGACGCGGCCTGCGAACAAGCGCA GCCCGCGGAGTTACCCGCTGCAACGCCGGCTGGCAAACCCGGGGGGCAGGACGGCTTTCTGTTCAGCGGCAACCGCCACG AGAGCGTGCCGCGCGCGTTGTTCCTGGACCGCCGGCTGACGCCGCTCGAACGCAACGCATGGCAGGTCATCCGGATGCAG TTGAATGTGGATGGCCTGACGGCGCTGCCCACCTACGATCAGTTGCGCCCCATGCTCGCCGTCATGCCCTGCGGTCCCGT GGCGTCCACGGAAACCGTCGCGCGGGCATTGACGCTGCTGCGACTGACGCGCTGGCTCAGCCTCGTGCGGCGACGCCGCG ACCAGCGCAGCGGCCGGATCATGGGCAATCTCTACGTGCTGCACGACGCGCCGCTCACCCCTTTTGAAGCAATGCAGCTG GATGCCGACTACCTCGGGCTGGTCAGCCAGGCGCTGACCCATGCGAGCAAGGCCGTGCAGTCCGTGGGACACCATGTGCT GCAGGAGGTCGCTGACGACCCGATGCTACGCGGCGGCGTTCTGCCCACGCGCCTGCAGGTGCTTACGGCGCAGTTGGCCG ATGGGGTGCAGCAGCCGCAAACGCAGGGGGAAAGTTACCCACAGGATGCGCACACTGGCGATTCCGAAGGAGGTCGAGCA AGCCTGCTTCGGATTCCTGACCAGCCGTCTTCGGATTCCGAATCAGGCCGGAAACCCGCGCCAGAGCGCTCTCTTCGGAA TCCGAAGGAGGCCCGTACTGGTAGTTTTCGTATAGGAGAACGTACTGTACTGCGCGAGCGCGCGATGGACGGCGTGCGCC TGCCGGCCGAATTTCTCAGCCTGAAGGACGAGCAGCAATCGGGCGCACTGGTCGCCCTGCGGCAAGTAGCGCAGGAACAG CGCCAGGCCGTGATGGACGAGTGGGTCGCGCGATGCCGTGACAGTGCTGTGCGCAATCCGGCGGGCTATCTCTTCGGGCT CATCCAGCGGGCCCTGCGTGGCGAGTTCAGGGCGTGGGCCGGAGCGGGGAATGCCAAGGCACCCGCGCCTGACGCACCAC CACCTGCCCCGCCTCGACCACCACCTCCGCCCTCCGCCCCGGCGCCGAAGCCCGCGAGCCCGGAAGTGGCTCGGGCGCAC CTGGAGCGGCTGCGCGCGATCCTGCGCGGCGGTTGA
Upstream 100 bases:
>100_bases CTGGACGTCGCAATGGACCTGGCCGAGGAAATGAGCATTCCGCTGTCCGTCGTGTGGGCCGCGATACAGAGCTGGATCGC ACAAGGTCTGGTCTAAGCCC
Downstream 100 bases:
>100_bases GCCGATGCAACCGACTGGCAGCGCCAGTAACCGCTATACCCAGGGTATAGCGAGGGCGCGATGCCGACCGGCTCGCCGAT GCTCGCCAACAGGCGAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MAAPGKPRPPGPRSLSDVFDAACEQAQPAELPAATPAGKPGGQDGFLFSGNRHESVPRALFLDRRLTPLERNAWQVIRMQ LNVDGLTALPTYDQLRPMLAVMPCGPVASTETVARALTLLRLTRWLSLVRRRRDQRSGRIMGNLYVLHDAPLTPFEAMQL DADYLGLVSQALTHASKAVQSVGHHVLQEVADDPMLRGGVLPTRLQVLTAQLADGVQQPQTQGESYPQDAHTGDSEGGRA SLLRIPDQPSSDSESGRKPAPERSLRNPKEARTGSFRIGERTVLRERAMDGVRLPAEFLSLKDEQQSGALVALRQVAQEQ RQAVMDEWVARCRDSAVRNPAGYLFGLIQRALRGEFRAWAGAGNAKAPAPDAPPPAPPRPPPPPSAPAPKPASPEVARAH LERLRAILRGG
Sequences:
>Translated_411_residues MAAPGKPRPPGPRSLSDVFDAACEQAQPAELPAATPAGKPGGQDGFLFSGNRHESVPRALFLDRRLTPLERNAWQVIRMQ LNVDGLTALPTYDQLRPMLAVMPCGPVASTETVARALTLLRLTRWLSLVRRRRDQRSGRIMGNLYVLHDAPLTPFEAMQL DADYLGLVSQALTHASKAVQSVGHHVLQEVADDPMLRGGVLPTRLQVLTAQLADGVQQPQTQGESYPQDAHTGDSEGGRA SLLRIPDQPSSDSESGRKPAPERSLRNPKEARTGSFRIGERTVLRERAMDGVRLPAEFLSLKDEQQSGALVALRQVAQEQ RQAVMDEWVARCRDSAVRNPAGYLFGLIQRALRGEFRAWAGAGNAKAPAPDAPPPAPPRPPPPPSAPAPKPASPEVARAH LERLRAILRGG >Mature_410_residues AAPGKPRPPGPRSLSDVFDAACEQAQPAELPAATPAGKPGGQDGFLFSGNRHESVPRALFLDRRLTPLERNAWQVIRMQL NVDGLTALPTYDQLRPMLAVMPCGPVASTETVARALTLLRLTRWLSLVRRRRDQRSGRIMGNLYVLHDAPLTPFEAMQLD ADYLGLVSQALTHASKAVQSVGHHVLQEVADDPMLRGGVLPTRLQVLTAQLADGVQQPQTQGESYPQDAHTGDSEGGRAS LLRIPDQPSSDSESGRKPAPERSLRNPKEARTGSFRIGERTVLRERAMDGVRLPAEFLSLKDEQQSGALVALRQVAQEQR QAVMDEWVARCRDSAVRNPAGYLFGLIQRALRGEFRAWAGAGNAKAPAPDAPPPAPPRPPPPPSAPAPKPASPEVARAHL ERLRAILRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44561; Mature: 44430
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPGKPRPPGPRSLSDVFDAACEQAQPAELPAATPAGKPGGQDGFLFSGNRHESVPRAL CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHH FLDRRLTPLERNAWQVIRMQLNVDGLTALPTYDQLRPMLAVMPCGPVASTETVARALTLL HHHCCCCCHHHCHHHHEEEEECCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RLTRWLSLVRRRRDQRSGRIMGNLYVLHDAPLTPFEAMQLDADYLGLVSQALTHASKAVQ HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH SVGHHVLQEVADDPMLRGGVLPTRLQVLTAQLADGVQQPQTQGESYPQDAHTGDSEGGRA HHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCE SLLRIPDQPSSDSESGRKPAPERSLRNPKEARTGSFRIGERTVLRERAMDGVRLPAEFLS EEEECCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHH LKDEQQSGALVALRQVAQEQRQAVMDEWVARCRDSAVRNPAGYLFGLIQRALRGEFRAWA HCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC GAGNAKAPAPDAPPPAPPRPPPPPSAPAPKPASPEVARAHLERLRAILRGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAPGKPRPPGPRSLSDVFDAACEQAQPAELPAATPAGKPGGQDGFLFSGNRHESVPRAL CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHH FLDRRLTPLERNAWQVIRMQLNVDGLTALPTYDQLRPMLAVMPCGPVASTETVARALTLL HHHCCCCCHHHCHHHHEEEEECCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RLTRWLSLVRRRRDQRSGRIMGNLYVLHDAPLTPFEAMQLDADYLGLVSQALTHASKAVQ HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH SVGHHVLQEVADDPMLRGGVLPTRLQVLTAQLADGVQQPQTQGESYPQDAHTGDSEGGRA HHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCE SLLRIPDQPSSDSESGRKPAPERSLRNPKEARTGSFRIGERTVLRERAMDGVRLPAEFLS EEEECCCCCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHH LKDEQQSGALVALRQVAQEQRQAVMDEWVARCRDSAVRNPAGYLFGLIQRALRGEFRAWA HCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC GAGNAKAPAPDAPPPAPPRPPPPPSAPAPKPASPEVARAHLERLRAILRGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA