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The map label for this gene is ydiP [H]

Identifier: 120609258

GI number: 120609258

Start: 602550

End: 604010

Strand: Reverse

Name: ydiP [H]

Synonym: Aave_0557

Alternate gene names: 120609258

Gene position: 604010-602550 (Counterclockwise)

Preceding gene: 120609259

Following gene: 120609257

Centisome position: 11.28

GC content: 69.06

Gene sequence:

>1461_bases
ATGAAACCCACACACACCGACACCGAGGCCATCGATTACGGCAGCGTCTGCAGCGGCATCGAGGCCGTCAGCCTCGCGTG
GGAGCCGCTCGGCCTCAGACCGGCCTGGTTCGCCGAAACGGATGCCTTCGCGAGCGCCGTTCTCGCGCATCGCTTCCCGC
AGGTACCCAACCTCGGCGACATGACGTTGCTGGCGCGCCGCATTCGAGCGAGAGAGGTTGCTGCACCTGCCGTCCTGGTC
GGCGGCACGCCGTGCCAGTCGTTCAGCACCGCGGGAGCCCGCCAGGGGCTTGCCGATCCGCGTGGTGCGCTCACCCTTGC
CTATGTGGAGATCGCCGATGCCATCGACCAAGTCCGTTCCCGCGCACACCTCCCGCCCACGACGGTCGTCTGGGAGAACG
TCCCCGGCGTGCTCAGCGACCGGGGCAATGCCTTCGGCTGCCTGCTGGGCGCACTGGCCGGCGAAGGCGGTGCTCTCCAA
CCGCCAGGGAAGCGGTGGACGCACGCTGGTTGTGTGTCTGGCCCCCGGCGCCGCGTCGCCTGGCGCGTGCTCGACGCCCA
ATACTTCGGTCTCGCCCAACGCCGCAAGCGCGTGTTTCTTGTGGCAAGTGGTCGAAGCGACCTCGATCCCGCCGAGGTAC
TTTTTGAGCGAGAAGGCCTGCCGCGGCATCCTGCGCCGGGCAGCACGCCGCGGGAAAGGGCTTCCTCCGTTGTTGGAACT
TGCGCTGCAACAGCGGGCGGGAGATCAGGGCTGAAATCGCCGTACGGCCCAGTCCGCTTCTCGGTAGGGTTCGGCAACGG
CCTGGAGCCGACCGAGCTCGCGGCATGCCTGATGGGTGCGCCACCACGGTTCGATCTCTCTACCGAAACCGTACTGGTCC
AGTCGGTGGCCGGCGCGATCAGCCACACTCTGGACACCGCGAACGGGGGCAAGGGGTGCGGCGAGGACGGCACGGGCAAG
GGTGTACCCATCATCGCCTTCACTGCGCAGGGGAACGGCGCCGACGCGCTCACTGGGCGGTGCCCGACCTTGCGGGCGGG
GGCCCACAAATCCGGCCATGGAAACGGCGGTGTCGTCCCAGCGATAGCGTTCGCGCAGAAATCCCACGACGAGTTGCGCT
GGGAGGGCGGCCATGGGCAGATCGCGGGCGCGCTCTCCACTGGCGGAGGGAAGCCGGGTCAAGGCCGTCCCATGGTGCTG
CAGCCCGCGACCCAGGAAGACCACTTTGTGTGCGAGCCGGCCGGCGCCGGCAGTTGGGGCGTGCGCTGGCGCGTGCGGCG
GCTTATGCCTCGCGAGTGCGAGCGGCTGCAGGGCATGCCGGACGATCACACGCTGGTGCCCTACCGCGGCAAGCCCGCAG
CGGATGGACCGCGCTACAAGGCCATCGGCAACTCGATGGCCGTACCGTGCGTCGCCTGGATCGGCGCACGGCTGCTGCGT
GCGCTGTCGGGAGCACCCTGA

Upstream 100 bases:

>100_bases
CGATGCGTTCCACGGGTGGCCACTTCCTCGCCAGCCGGAGACCCCCGCGGTCTTCGGCGCCTTCCTCCTGCCGTCCCCCA
CCAACGCCCAGGAGAACCCC

Downstream 100 bases:

>100_bases
CGCATCGTCAGAAAAGCCCGACCCTGCGCAGGGCAGTGTCCCGATGGTGCAGGCCCGGGCCGATGCGCGAGGATGGCGCT
GCCGACCCGGGGCCATTGGC

Product: DNA-cytosine methyltransferase

Products: NA

Alternate protein names: M2.BsuMI; Cytosine-specific methyltransferase M2.BsuMI [H]

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MKPTHTDTEAIDYGSVCSGIEAVSLAWEPLGLRPAWFAETDAFASAVLAHRFPQVPNLGDMTLLARRIRAREVAAPAVLV
GGTPCQSFSTAGARQGLADPRGALTLAYVEIADAIDQVRSRAHLPPTTVVWENVPGVLSDRGNAFGCLLGALAGEGGALQ
PPGKRWTHAGCVSGPRRRVAWRVLDAQYFGLAQRRKRVFLVASGRSDLDPAEVLFEREGLPRHPAPGSTPRERASSVVGT
CAATAGGRSGLKSPYGPVRFSVGFGNGLEPTELAACLMGAPPRFDLSTETVLVQSVAGAISHTLDTANGGKGCGEDGTGK
GVPIIAFTAQGNGADALTGRCPTLRAGAHKSGHGNGGVVPAIAFAQKSHDELRWEGGHGQIAGALSTGGGKPGQGRPMVL
QPATQEDHFVCEPAGAGSWGVRWRVRRLMPRECERLQGMPDDHTLVPYRGKPAADGPRYKAIGNSMAVPCVAWIGARLLR
ALSGAP

Sequences:

>Translated_486_residues
MKPTHTDTEAIDYGSVCSGIEAVSLAWEPLGLRPAWFAETDAFASAVLAHRFPQVPNLGDMTLLARRIRAREVAAPAVLV
GGTPCQSFSTAGARQGLADPRGALTLAYVEIADAIDQVRSRAHLPPTTVVWENVPGVLSDRGNAFGCLLGALAGEGGALQ
PPGKRWTHAGCVSGPRRRVAWRVLDAQYFGLAQRRKRVFLVASGRSDLDPAEVLFEREGLPRHPAPGSTPRERASSVVGT
CAATAGGRSGLKSPYGPVRFSVGFGNGLEPTELAACLMGAPPRFDLSTETVLVQSVAGAISHTLDTANGGKGCGEDGTGK
GVPIIAFTAQGNGADALTGRCPTLRAGAHKSGHGNGGVVPAIAFAQKSHDELRWEGGHGQIAGALSTGGGKPGQGRPMVL
QPATQEDHFVCEPAGAGSWGVRWRVRRLMPRECERLQGMPDDHTLVPYRGKPAADGPRYKAIGNSMAVPCVAWIGARLLR
ALSGAP
>Mature_486_residues
MKPTHTDTEAIDYGSVCSGIEAVSLAWEPLGLRPAWFAETDAFASAVLAHRFPQVPNLGDMTLLARRIRAREVAAPAVLV
GGTPCQSFSTAGARQGLADPRGALTLAYVEIADAIDQVRSRAHLPPTTVVWENVPGVLSDRGNAFGCLLGALAGEGGALQ
PPGKRWTHAGCVSGPRRRVAWRVLDAQYFGLAQRRKRVFLVASGRSDLDPAEVLFEREGLPRHPAPGSTPRERASSVVGT
CAATAGGRSGLKSPYGPVRFSVGFGNGLEPTELAACLMGAPPRFDLSTETVLVQSVAGAISHTLDTANGGKGCGEDGTGK
GVPIIAFTAQGNGADALTGRCPTLRAGAHKSGHGNGGVVPAIAFAQKSHDELRWEGGHGQIAGALSTGGGKPGQGRPMVL
QPATQEDHFVCEPAGAGSWGVRWRVRRLMPRECERLQGMPDDHTLVPYRGKPAADGPRYKAIGNSMAVPCVAWIGARLLR
ALSGAP

Specific function: This methylase may recognize the double-stranded sequence CTCGAG, causing specific methylation on C-? on both strands, and protects the DNA from cleavage by the BsuMI endonuclease [H]

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the C5-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018117
- InterPro:   IPR001525 [H]

Pfam domain/function: PF00145 DNA_methylase [H]

EC number: =2.1.1.37 [H]

Molecular weight: Translated: 50758; Mature: 50758

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTHTDTEAIDYGSVCSGIEAVSLAWEPLGLRPAWFAETDAFASAVLAHRFPQVPNLGD
CCCCCCCCHHCCHHHHHCCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH
MTLLARRIRAREVAAPAVLVGGTPCQSFSTAGARQGLADPRGALTLAYVEIADAIDQVRS
HHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
RAHLPPTTVVWENVPGVLSDRGNAFGCLLGALAGEGGALQPPGKRWTHAGCVSGPRRRVA
HCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEE
WRVLDAQYFGLAQRRKRVFLVASGRSDLDPAEVLFEREGLPRHPAPGSTPRERASSVVGT
EEEHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
CAATAGGRSGLKSPYGPVRFSVGFGNGLEPTELAACLMGAPPRFDLSTETVLVQSVAGAI
HHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
SHTLDTANGGKGCGEDGTGKGVPIIAFTAQGNGADALTGRCPTLRAGAHKSGHGNGGVVP
HHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
AIAFAQKSHDELRWEGGHGQIAGALSTGGGKPGQGRPMVLQPATQEDHFVCEPAGAGSWG
HHHHHHCCCCCCEEECCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCC
VRWRVRRLMPRECERLQGMPDDHTLVPYRGKPAADGPRYKAIGNSMAVPCVAWIGARLLR
HHHHHHHHCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHH
ALSGAP
HHCCCC
>Mature Secondary Structure
MKPTHTDTEAIDYGSVCSGIEAVSLAWEPLGLRPAWFAETDAFASAVLAHRFPQVPNLGD
CCCCCCCCHHCCHHHHHCCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH
MTLLARRIRAREVAAPAVLVGGTPCQSFSTAGARQGLADPRGALTLAYVEIADAIDQVRS
HHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH
RAHLPPTTVVWENVPGVLSDRGNAFGCLLGALAGEGGALQPPGKRWTHAGCVSGPRRRVA
HCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEE
WRVLDAQYFGLAQRRKRVFLVASGRSDLDPAEVLFEREGLPRHPAPGSTPRERASSVVGT
EEEHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
CAATAGGRSGLKSPYGPVRFSVGFGNGLEPTELAACLMGAPPRFDLSTETVLVQSVAGAI
HHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
SHTLDTANGGKGCGEDGTGKGVPIIAFTAQGNGADALTGRCPTLRAGAHKSGHGNGGVVP
HHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
AIAFAQKSHDELRWEGGHGQIAGALSTGGGKPGQGRPMVLQPATQEDHFVCEPAGAGSWG
HHHHHHCCCCCCEEECCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCC
VRWRVRRLMPRECERLQGMPDDHTLVPYRGKPAADGPRYKAIGNSMAVPCVAWIGARLLR
HHHHHHHHCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHH
ALSGAP
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]