| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609245
Identifier: 120609245
GI number: 120609245
Start: 590586
End: 590846
Strand: Reverse
Name: 120609245
Synonym: Aave_0544
Alternate gene names: NA
Gene position: 590846-590586 (Counterclockwise)
Preceding gene: 120609246
Following gene: 120609244
Centisome position: 11.04
GC content: 65.13
Gene sequence:
>261_bases ATGGACCCGATTCTGTCAACGCTCCCCCGCCCGCTGCTGGCCTTCGTCGAAGGCCAACTGTCCAACGACGAGACCTCCAC CGATGAAGAACTCCAAGAGCACTTCGTCGCCCACGGCCTCACCGAGGACCAGGCGCGGCAGGCAGTGACCTACCGCGCGC AGTACCTGAGCAACATCTACCTGGACGGCTTCACGCCCATCACCGCGGCCGACGACGTGCTGCGCTTCAACCCGGACAGC CGGCAGTTCGAGCCGGTCTGA
Upstream 100 bases:
>100_bases TGGCGTGCAGGCGTTCGCGCCTACCACGCACGGCGGCGTACCCCCACCGCATCCGCGTCACCCGTCGCGGCTGTTTTGTC CTGAGCGGGGAGGAGCCGAC
Downstream 100 bases:
>100_bases ACGCCATCACTTCACCCCAGGGGGCTGCACACGCCCCGATGGGCCGGTGCTGTCCCCGCCACTCCGAGGACATTGCCATG CCCACCACCGATTTCCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MDPILSTLPRPLLAFVEGQLSNDETSTDEELQEHFVAHGLTEDQARQAVTYRAQYLSNIYLDGFTPITAADDVLRFNPDS RQFEPV
Sequences:
>Translated_86_residues MDPILSTLPRPLLAFVEGQLSNDETSTDEELQEHFVAHGLTEDQARQAVTYRAQYLSNIYLDGFTPITAADDVLRFNPDS RQFEPV >Mature_86_residues MDPILSTLPRPLLAFVEGQLSNDETSTDEELQEHFVAHGLTEDQARQAVTYRAQYLSNIYLDGFTPITAADDVLRFNPDS RQFEPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9727; Mature: 9727
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPILSTLPRPLLAFVEGQLSNDETSTDEELQEHFVAHGLTEDQARQAVTYRAQYLSNIY CCHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LDGFTPITAADDVLRFNPDSRQFEPV CCCCCCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MDPILSTLPRPLLAFVEGQLSNDETSTDEELQEHFVAHGLTEDQARQAVTYRAQYLSNIY CCHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LDGFTPITAADDVLRFNPDSRQFEPV CCCCCCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA