| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609246
Identifier: 120609246
GI number: 120609246
Start: 590863
End: 591270
Strand: Reverse
Name: 120609246
Synonym: Aave_0545
Alternate gene names: NA
Gene position: 591270-590863 (Counterclockwise)
Preceding gene: 120609247
Following gene: 120609245
Centisome position: 11.05
GC content: 65.93
Gene sequence:
>408_bases ATGGGCTGGTACTTCTCTCCCCAATCGCGGTCTGAACTGATCGCGGAACTGATCGCACCGCAAGAGACCGAGCGCACCAG CGCGAAGGTCATCGCCCACGCCCTGCGCGGCAACGTGCTGTGGTCCGTGGTCGAAATGACCGCCAAGGCCGAAGGCGTAC ATCGTGACCTGGCGGCAGGCCAATCCCTGCGCTACATCCGCTGCGATCTGCTCGAACGCAGCGGTGGCCAGTGGGGCCAC AAGCCGCTGGAAGAGTCCATGCACCCGTACTACTACTCGTGCCCGCTGTCCTATCTGGACCTCGCGCCGGAGCAGTCCGC CGACTGGCGTGCAGGCGTTCGCGCCTACCACGCACGGCGGCGTACCCCCACCGCATCCGCGTCACCCGTCGCGGCTGTTT TGTCCTGA
Upstream 100 bases:
>100_bases TCCGCACCGGACTTCATCGCCGCCCACGCGGCATTCCATCACCCGCCGATGGTTCTCCCCCTCGGGGAGGCCTTCGGCTC GATTCTTCAGGAGGCCTCTC
Downstream 100 bases:
>100_bases GCGGGGAGGAGCCGACATGGACCCGATTCTGTCAACGCTCCCCCGCCCGCTGCTGGCCTTCGTCGAAGGCCAACTGTCCA ACGACGAGACCTCCACCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGWYFSPQSRSELIAELIAPQETERTSAKVIAHALRGNVLWSVVEMTAKAEGVHRDLAAGQSLRYIRCDLLERSGGQWGH KPLEESMHPYYYSCPLSYLDLAPEQSADWRAGVRAYHARRRTPTASASPVAAVLS
Sequences:
>Translated_135_residues MGWYFSPQSRSELIAELIAPQETERTSAKVIAHALRGNVLWSVVEMTAKAEGVHRDLAAGQSLRYIRCDLLERSGGQWGH KPLEESMHPYYYSCPLSYLDLAPEQSADWRAGVRAYHARRRTPTASASPVAAVLS >Mature_134_residues GWYFSPQSRSELIAELIAPQETERTSAKVIAHALRGNVLWSVVEMTAKAEGVHRDLAAGQSLRYIRCDLLERSGGQWGHK PLEESMHPYYYSCPLSYLDLAPEQSADWRAGVRAYHARRRTPTASASPVAAVLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15057; Mature: 14926
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWYFSPQSRSELIAELIAPQETERTSAKVIAHALRGNVLWSVVEMTAKAEGVHRDLAAG CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QSLRYIRCDLLERSGGQWGHKPLEESMHPYYYSCPLSYLDLAPEQSADWRAGVRAYHARR CCCHHHHHHHHHCCCCCCCCCCHHHCCCCEEEECCHHHHHCCCCCCCCHHHHHHHHHHHC RTPTASASPVAAVLS CCCCCCCCCHHHHCC >Mature Secondary Structure GWYFSPQSRSELIAELIAPQETERTSAKVIAHALRGNVLWSVVEMTAKAEGVHRDLAAG CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QSLRYIRCDLLERSGGQWGHKPLEESMHPYYYSCPLSYLDLAPEQSADWRAGVRAYHARR CCCHHHHHHHHHCCCCCCCCCCHHHCCCCEEEECCHHHHHCCCCCCCCHHHHHHHHHHHC RTPTASASPVAAVLS CCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA