The gene/protein map for NC_008752 is currently unavailable.
Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609196

Identifier: 120609196

GI number: 120609196

Start: 532566

End: 533504

Strand: Reverse

Name: 120609196

Synonym: Aave_0494

Alternate gene names: NA

Gene position: 533504-532566 (Counterclockwise)

Preceding gene: 120609197

Following gene: 120609195

Centisome position: 9.97

GC content: 64.54

Gene sequence:

>939_bases
ATGAAACGAAAGATCGTCGCTGCACTCGTCGCAGCCCTTCCATTGCTGGCTTCGGCGTTTCCTGAGAGGCCGATCAAGCT
GATCGTGCCCATGGCTGCCGGGAGCATCACCGACGTCGCTGCGCGTTCAGTCGCGGAAGCCATGTCGCAGCGCCTCAAGC
AGCCAGTCGTCGTGGACAACCAGCAGAACCTGGTTGGCACGATGGCCGCGGTCCGAGCCGCGCCCGACGGGTACACGCTG
CTGATCGTCGGCATCACCAATGCCGCAACCAACGTAATCACCATGAAGTCGCCGCCCTACGATCCGCGCAAGGACTTCAC
GCCGATCGGCCAGATGGCCGAGTTGCCCTACCTCCTTGTAGCCAGCACGAAGCTGCCCGCGCAGACGATGAAGGACCTCA
TCAGCTACGGGAAGTCACATCCGGACAAGCTGTCCTATGGCTACGGCTCAGGCAGCGCCCAGTTGGCGACGGTGCGCTTT
ACGTCGATGGCCAATTTCACCGCGACCGGAGTCGGCTACAAGGGCGTCCCGCAGGCGATGACGGATCTGATGGGTGGCAC
CATCGACTTCGTCGTCGCCGATCTGAACAACGGGCTTCAGGCAGCTCGTGCCGGCCGCGTCACGGCGCTCGGGGTGACCT
CCGCGAAGCGCTCCCCCCTCGCTCCCGACGTTCCCACGTTGCACGAGCAAGGCCTGGAAGGCTATGACATCTCGGTTCGC
TTCGGCCTTGCCGGTCCGGCACACCTGCCCGCCTCCATCACCGAACAGCTCAACGCCGCGTTGCGTGAAGCCCTCAACGA
TCCAGCCGTGCGGCAGCGCTTTGACGGCGCGGGCATCGCGATCGTGCCCTCTTCCCCCGAGGTCTTCGCCCGCAACATCC
GGGACGACATTGCCAAATGGTCGGCGATCGCTAGGGACGCCGGCATCGCCCCCCAGTAG

Upstream 100 bases:

>100_bases
CCATGCCGGCGTCGTTTTCGGCGAGTTGTGACATTGCCCTGCCCAAAGCGGATGCTCGCGGCACCCTACACAAGAACACC
AGATCATCGAGGAGAAAACC

Downstream 100 bases:

>100_bases
AGGCCGCGCTCTCAGCACCCTCGTCCATCTGCATTGAGGACGGGGCGTCTTCTCGGCTGACCGTGCTCAGCCCGCCCTGG
GCGGCTGCGCCCACCTGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKRKIVAALVAALPLLASAFPERPIKLIVPMAAGSITDVAARSVAEAMSQRLKQPVVVDNQQNLVGTMAAVRAAPDGYTL
LIVGITNAATNVITMKSPPYDPRKDFTPIGQMAELPYLLVASTKLPAQTMKDLISYGKSHPDKLSYGYGSGSAQLATVRF
TSMANFTATGVGYKGVPQAMTDLMGGTIDFVVADLNNGLQAARAGRVTALGVTSAKRSPLAPDVPTLHEQGLEGYDISVR
FGLAGPAHLPASITEQLNAALREALNDPAVRQRFDGAGIAIVPSSPEVFARNIRDDIAKWSAIARDAGIAPQ

Sequences:

>Translated_312_residues
MKRKIVAALVAALPLLASAFPERPIKLIVPMAAGSITDVAARSVAEAMSQRLKQPVVVDNQQNLVGTMAAVRAAPDGYTL
LIVGITNAATNVITMKSPPYDPRKDFTPIGQMAELPYLLVASTKLPAQTMKDLISYGKSHPDKLSYGYGSGSAQLATVRF
TSMANFTATGVGYKGVPQAMTDLMGGTIDFVVADLNNGLQAARAGRVTALGVTSAKRSPLAPDVPTLHEQGLEGYDISVR
FGLAGPAHLPASITEQLNAALREALNDPAVRQRFDGAGIAIVPSSPEVFARNIRDDIAKWSAIARDAGIAPQ
>Mature_312_residues
MKRKIVAALVAALPLLASAFPERPIKLIVPMAAGSITDVAARSVAEAMSQRLKQPVVVDNQQNLVGTMAAVRAAPDGYTL
LIVGITNAATNVITMKSPPYDPRKDFTPIGQMAELPYLLVASTKLPAQTMKDLISYGKSHPDKLSYGYGSGSAQLATVRF
TSMANFTATGVGYKGVPQAMTDLMGGTIDFVVADLNNGLQAARAGRVTALGVTSAKRSPLAPDVPTLHEQGLEGYDISVR
FGLAGPAHLPASITEQLNAALREALNDPAVRQRFDGAGIAIVPSSPEVFARNIRDDIAKWSAIARDAGIAPQ

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 32802; Mature: 32802

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKIVAALVAALPLLASAFPERPIKLIVPMAAGSITDVAARSVAEAMSQRLKQPVVVDN
CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECC
QQNLVGTMAAVRAAPDGYTLLIVGITNAATNVITMKSPPYDPRKDFTPIGQMAELPYLLV
CHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHCCEEEE
ASTKLPAQTMKDLISYGKSHPDKLSYGYGSGSAQLATVRFTSMANFTATGVGYKGVPQAM
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCEECCCCCCCCHHHH
TDLMGGTIDFVVADLNNGLQAARAGRVTALGVTSAKRSPLAPDVPTLHEQGLEGYDISVR
HHHHCCCEEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEEE
FGLAGPAHLPASITEQLNAALREALNDPAVRQRFDGAGIAIVPSSPEVFARNIRDDIAKW
ECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH
SAIARDAGIAPQ
HHHHHCCCCCCC
>Mature Secondary Structure
MKRKIVAALVAALPLLASAFPERPIKLIVPMAAGSITDVAARSVAEAMSQRLKQPVVVDN
CCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECC
QQNLVGTMAAVRAAPDGYTLLIVGITNAATNVITMKSPPYDPRKDFTPIGQMAELPYLLV
CHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHCCEEEE
ASTKLPAQTMKDLISYGKSHPDKLSYGYGSGSAQLATVRFTSMANFTATGVGYKGVPQAM
ECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEHHCCCEECCCCCCCCHHHH
TDLMGGTIDFVVADLNNGLQAARAGRVTALGVTSAKRSPLAPDVPTLHEQGLEGYDISVR
HHHHCCCEEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEEE
FGLAGPAHLPASITEQLNAALREALNDPAVRQRFDGAGIAIVPSSPEVFARNIRDDIAKW
ECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH
SAIARDAGIAPQ
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]