| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609195
Identifier: 120609195
GI number: 120609195
Start: 531453
End: 532442
Strand: Reverse
Name: 120609195
Synonym: Aave_0493
Alternate gene names: NA
Gene position: 532442-531453 (Counterclockwise)
Preceding gene: 120609196
Following gene: 120609194
Centisome position: 9.95
GC content: 62.83
Gene sequence:
>990_bases ATGCCCGCTGAGGCAGGGATCGGCTCGTCCCTTCATCGCGAAAGATCCTCGACCATGACGCCAACCAGAATCAACACCCA TGTGGCCCTGGCACACGCCATCTCACCTCTCAAGGTATGGAGCAGTTTCAAGGACGAGAACGTCCGCCAGCATGTGTTGC GCGTGGCTCGGGCCCTCTTGGCAGTGAGACGTGACCTGGAGGCCAGTGCGCATGCGTTGGCGACCACACGGTTACACGCC CTGGGGCACACGGTCGTGCAGCTTGCGCTGGTTGCAGACCTGCTACCTGGGGGGCCCCTTCACGGTCTTCTATTGCCCCA GGACCGCAATGCCGCCAAGTGGTCGAGCGGCATGCTGAAACACGGGTGGCATGGGTTGGCAACGACATCACAGATCGCCT GGGCACTGGGATTCGATCACGCCAGCTTTGCAGAAGCCGCGGACAATCCGACGCTGCGCTGGATCGCCTGCGGCGAAGTC CCCCTGTATCTCCGGGGCTCCTGGCAAGTATTGGGAGGGGTGATCGACGCGCCGCTGCTACGCTGGATGAGCGACTTGGG CCGACGCCAAGACGAGCAGCCAGAAGCGAGCTGCGCAGCGCTCAAGGGAAGCTACCGCGACACGATCCAACAGTGGGATT TCATGGCTTCCGCGCTGCGCGACCTGCATCTTCGGATGCAGGAGTGCTGTTGGATGCTCAATCAGCTTTCCGAGCGGCTG GACCCACTGGGTCAGAGGGTCCTCTCCGCCATCGAGACTCGATTCACAGGAGCAGGCAGAGGGCTCCCCACCGACGATGT GTATGCGGAGTTCGACTCGGACCAGCAACACAGCATGCGCACCGGATGCGCTGCGTTACTTCGCTTGGCGCAAATCCGCC TTATCGATGATGAGGGGGCACTGACCGATCACGGTCGCGATGCGGTGGTGGATGCTCGCCGGCTAATCTGGGCGGCCCAT CCCCCACTACCACGCGTCCCTCGGCCGTAG
Upstream 100 bases:
>100_bases TCCATCTGCATTGAGGACGGGGCGTCTTCTCGGCTGACCGTGCTCAGCCCGCCCTGGGCGGCTGCGCCCACCTGGACCAC AGTCCACTCGTACCAATCGC
Downstream 100 bases:
>100_bases CCTAAAGGGATCACCTCCTGGCCCGGATTCTGCCTTGGCGCCCGCGCTCCGGATGCTCACTATCGACCGCAGGTCGCGGA GGACTTCTCCTCCCTTCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MPAEAGIGSSLHRERSSTMTPTRINTHVALAHAISPLKVWSSFKDENVRQHVLRVARALLAVRRDLEASAHALATTRLHA LGHTVVQLALVADLLPGGPLHGLLLPQDRNAAKWSSGMLKHGWHGLATTSQIAWALGFDHASFAEAADNPTLRWIACGEV PLYLRGSWQVLGGVIDAPLLRWMSDLGRRQDEQPEASCAALKGSYRDTIQQWDFMASALRDLHLRMQECCWMLNQLSERL DPLGQRVLSAIETRFTGAGRGLPTDDVYAEFDSDQQHSMRTGCAALLRLAQIRLIDDEGALTDHGRDAVVDARRLIWAAH PPLPRVPRP
Sequences:
>Translated_329_residues MPAEAGIGSSLHRERSSTMTPTRINTHVALAHAISPLKVWSSFKDENVRQHVLRVARALLAVRRDLEASAHALATTRLHA LGHTVVQLALVADLLPGGPLHGLLLPQDRNAAKWSSGMLKHGWHGLATTSQIAWALGFDHASFAEAADNPTLRWIACGEV PLYLRGSWQVLGGVIDAPLLRWMSDLGRRQDEQPEASCAALKGSYRDTIQQWDFMASALRDLHLRMQECCWMLNQLSERL DPLGQRVLSAIETRFTGAGRGLPTDDVYAEFDSDQQHSMRTGCAALLRLAQIRLIDDEGALTDHGRDAVVDARRLIWAAH PPLPRVPRP >Mature_328_residues PAEAGIGSSLHRERSSTMTPTRINTHVALAHAISPLKVWSSFKDENVRQHVLRVARALLAVRRDLEASAHALATTRLHAL GHTVVQLALVADLLPGGPLHGLLLPQDRNAAKWSSGMLKHGWHGLATTSQIAWALGFDHASFAEAADNPTLRWIACGEVP LYLRGSWQVLGGVIDAPLLRWMSDLGRRQDEQPEASCAALKGSYRDTIQQWDFMASALRDLHLRMQECCWMLNQLSERLD PLGQRVLSAIETRFTGAGRGLPTDDVYAEFDSDQQHSMRTGCAALLRLAQIRLIDDEGALTDHGRDAVVDARRLIWAAHP PLPRVPRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36322; Mature: 36191
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAEAGIGSSLHRERSSTMTPTRINTHVALAHAISPLKVWSSFKDENVRQHVLRVARALL CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AVRRDLEASAHALATTRLHALGHTVVQLALVADLLPGGPLHGLLLPQDRNAAKWSSGMLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHCCHHH HGWHGLATTSQIAWALGFDHASFAEAADNPTLRWIACGEVPLYLRGSWQVLGGVIDAPLL HCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHH RWMSDLGRRQDEQPEASCAALKGSYRDTIQQWDFMASALRDLHLRMQECCWMLNQLSERL HHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DPLGQRVLSAIETRFTGAGRGLPTDDVYAEFDSDQQHSMRTGCAALLRLAQIRLIDDEGA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCC LTDHGRDAVVDARRLIWAAHPPLPRVPRP CCCCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PAEAGIGSSLHRERSSTMTPTRINTHVALAHAISPLKVWSSFKDENVRQHVLRVARALL CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AVRRDLEASAHALATTRLHALGHTVVQLALVADLLPGGPLHGLLLPQDRNAAKWSSGMLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHCCHHH HGWHGLATTSQIAWALGFDHASFAEAADNPTLRWIACGEVPLYLRGSWQVLGGVIDAPLL HCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHH RWMSDLGRRQDEQPEASCAALKGSYRDTIQQWDFMASALRDLHLRMQECCWMLNQLSERL HHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DPLGQRVLSAIETRFTGAGRGLPTDDVYAEFDSDQQHSMRTGCAALLRLAQIRLIDDEGA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCC LTDHGRDAVVDARRLIWAAHPPLPRVPRP CCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA